Limulus polyphemus (Atlantic horseshoe crab): 106461267
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Entry
106461267 CDS
T08968
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04512
ECM-receptor interaction
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106461267
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106461267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpol04147
]
106461267
00536 Glycosaminoglycan binding proteins [BR:
lpol00536
]
106461267
Exosome [BR:
lpol04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106461267
Glycosaminoglycan binding proteins [BR:
lpol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106461267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106461267
NCBI-ProteinID:
XP_022243841
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MKFKKVLFCQFIALFFLLLLIEYSEAAACKGCQVQPCICVGEKGIPGIIGLAGVTGPPGP
PGRMGDEGPYGPYGARGERGEPGALGPKGIRGEQGVPGFSGSAGVPGLPGDEGMRGKQGF
PGCNGTDGAPGQHGIPGIPGVRGPPGPLGDYGMRGDPGEGGINSIGVKGEPGESGRPGPV
GRRGLTGLTGEKGVQGPLGVPGVKGDQGELGPKGPTGEGREGSKGPKGNRGYPGDVGPQG
PTGRRTPDPNIKHFRQGKKGVAGEKGEKGAKGEQGYDGIPGEVVSTTFDIVLDIFTFYSF
MIHSAGQHPNFMKCLMNIKSVHNGPPGPTVSIGEPIPGSPGSQGPVGERGEPGGPGRPGN
VGPVGYRGSPGIPGPQGPPGEPGPPGLSFKGEPGEDGIPGKRGPFGRPGVPGVQGLTGDK
GLPGFTVIGNPGEDGRSGLHGARGLPGQRGDPGFTGPKGIPGIGVYKTGPPGEYGLQGLP
GEPGSPGTPGRDGEPGFQGPRGDDCGYCPPGRHGIAGERGEDGRQGPRGPRGFPGYRGQR
GRKGESGRPGSPGFKGVPGRTGSDGMEGRKGIKGEHGELIYPGATKGAKGESGEVGPPGL
DGIPGKEGPPGPEGFRGFSGAKGQPGNFGDDGSPGFVGPPGPPGRPGPKGKEGDVLYASK
GFKGEKGDPGFDGFDGQVGDKGEKGEPFPLDRLEKDERYIRFRGPKGYPGVPGLKGNRGI
TGAKGYSGLKGLNGRAGQPGRKGASPRGETGRKGYPGIDGDPGLPGSPGLPGIRGKPGLD
GHPGTKGALGSPGDEGQEGPYGLRGPPGRQGDQGDYGIPGFYGEPGVPGPRGDPGLKGSA
GQSGFPGLKGEKGVPGVAGIGTIGPPGQPGFRGFDGQRGQKGNEGPPGRVGFPGEKGRVG
LPGNKGASGIPGKEGIPGTPGIPGKDGLSGLTGMRGEPGEAGAPGNDGLPGQRGLEGLPG
LKGEQGEPGYEGYRGRQGLPGFRGEAGDSGPQGPEGPPGDPSPVGQKGGIGEPGFLGPPG
RPGPPGLPGRLGPKGVQGVPGESLGAEFGPKGEVGDQGFRGPPGTPGPKGFMGIMGAPGN
EGVRGDKGYSGFPGFPGRDGSPGRPGVKGRSGLPGFPGVPGSKGERGIVGLPGQKGSVGD
EGIPGRPGPEGHKGQVGDTGEHGRPGLPSTEVSRGDRGEPGVPGLPGYPGERGESGLSGL
PGLKGQRGDPGFEGSPGIPGRDGSKGYPGEPGGVGEKGLPGYPGPKGEPGTTGISGFPGL
PGTPGVKGERGDVGEIGLIGPKGYRGFSVDGQKGERGEVGYAGDPGRFVIGPKGESGNPG
VPGLIGPPGDDGLPGVSTPGQRGNPGPPGFDGLLGQKGRRGDRGVDGITGFPGPRGLRGD
DGFPGEPGVPGYVGPDGDKGESGDNVPPPLIHERPRGFPGDRGLKGPKGITGYPGSIGLP
GLDGDRGIPGEPGPPGPTGRPGPQGPKGENGLRGNNGVEGFPGSRGQPGDPGQRGPPGSP
APSRGYYYTRHSQSVEIPQCPRGTTPMWNGYSLLYIMGNERAHGQDLGGPGSCLRRFSTM
PFMFCNLNNVCNLASRNDYSYWLSTPEPMPMMMTPIVGRDIQRYISRCVVCESSTQVIAV
HSQTMEIPDCPTGWDGLWIGYSFFMNTDAGAEGSGQPLWSPGSCLEDFRPNPFIECQGHG
RCNYYTTAYSFWLATIERNADFRVPDSQTLKAGDLRSRISRCKVCIRRLSGGNNDKEIFL
PISS
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaaaaaagtattattttgccagtttattgcattgttttttcttcttctcctg
atcgagtacagtgaggctgcggcctgtaaaggttgtcaagttcagccatgcatctgtgtg
ggagagaaaggtattcctggaattataggtcttgcgggagtcacaggtccacctggacca
ccaggtcgcatgggtgatgaaggaccatatggtccatatggtgcacgtggagaaagagga
gagcctggagctttggggcctaaaggaattaggggtgaacagggtgttccaggattcagt
ggatcagctggtgttccgggtttacctggagatgaagggatgcgagggaagcaaggattt
cctggatgtaatgggacagatggagcaccaggtcaacatggtataccaggaattccaggt
gtacggggtccacctggtccacttggagattatgggatgaggggagatccaggagaagga
ggaattaattctattggagttaaaggtgaacctggggaatctggtcgacctggccctgtg
ggccgcagaggactcacaggcttaacaggagagaaaggagttcaaggtccactaggagtt
cctggtgtaaaaggtgatcaaggtgaactagggcctaagggacctacaggagaaggcagg
gaaggatctaaaggcccaaagggtaacaggggttatccaggagatgtaggaccacaaggg
ccaacagggcgaagaactcctgatccaaacattaaacattttaggcaaggaaagaaaggt
gtagcaggtgaaaagggagagaaaggtgctaaaggagaacaaggctatgatgggatacca
ggagaagtagtaagtacaacgtttgatattgtacttgatattttcactttttactctttt
atgattcacagtgcaggacaacatcctaattttatgaagtgtttaatgaacatcaaatct
gtccacaatggtccacctggaccaactgtatctattggtgaacctattcctgggtcccca
ggatctcagggtccagtgggggagaggggggagccaggaggtccaggaagacctggaaat
gtaggacctgtaggatatcgtggttctcctggaataccaggtccacaaggtcctccaggt
gagccaggaccacctggacttagtttcaaaggagagcctggagaagatggaattccagga
aaacgaggtccctttggaagacctggtgtaccaggagtacagggtctaactggtgataaa
ggtctgcctggatttactgttattggtaacccaggagaagatggacgatctggtctgcat
ggggcacgtggacttccaggtcaacggggtgacccaggttttacagggccaaagggtata
cctggaattggtgtgtataaaactggaccacctggtgaatatggacttcaaggccttcct
ggagaaccaggttctccagggactccaggcagagatggagagccaggctttcagggacca
agaggggatgattgtggttactgtccaccaggacggcatggtattgctggagaaagagga
gaagatggacgccaaggacctcgtggcccaaggggtttcccaggatatcgtgggcagcga
ggaagaaaaggagaatctggaaggccaggttcaccaggctttaagggagttccaggtcga
acaggatctgatggtatggaaggacgaaaaggaataaagggtgaacatggagaattgata
tatccaggagctaccaaaggagcaaaaggagaatctggagaggttggtccacctggtctt
gatggaatcccaggaaaagaaggacctccaggtccagaaggttttagaggattttctgga
gcaaaaggacaaccgggaaattttggagatgatggttctccaggatttgtaggtcctcct
ggaccacctggtcgtcctggacctaaaggaaaagaaggggatgttttgtatgctagtaaa
ggttttaaaggagaaaaaggtgatcctggttttgatggctttgatggtcaagttggagat
aagggtgagaaaggagaaccctttcctttggatagattggaaaaagatgaaagatatatt
cgctttagaggtccaaaaggctaccctggtgtacctggtttaaagggaaacagaggtatt
actggtgcgaaaggctattctggtttaaagggtcttaatggtcgtgctggacaacctggc
aggaaaggagcttctcctcgtggtgaaacagggagaaaagggtatcctggtatagatggt
gatcctggacttccaggaagtccaggactgcctggaattagaggaaaaccaggtctagat
ggacatccaggaacaaagggtgcacttggttcacctggagatgaaggacaagaaggtccc
tatggattacgggggcctcctggtcgacaaggagaccaaggagattatggaattcctgga
ttttatggagaacctggggtacctggtcctagaggagatccagggcttaaaggttctgct
ggacaaagtggttttcctggactgaagggggagaaaggagttccaggtgttgctggaata
ggcactattggccctccaggacaacctggattcaggggatttgatggccaaagaggacaa
aaaggcaatgagggaccacctgggagagttggatttcccggagaaaaaggaagagttggt
ctgccaggcaataaaggagcatcaggaattccaggcaaggagggaataccaggaacccct
ggaattcctggaaaagatggattgtcaggattaacaggcatgagaggtgaacctggagaa
gcaggagccccaggaaatgatggattacctggacaacgtggactggaaggtctccctggc
cttaaaggagagcaaggagaaccagggtatgaaggatatcgcggacgccaaggtctacca
ggattcagaggtgaagcaggggattctggacctcaagggcctgagggtccacctggggat
ccttccccagtgggtcagaaaggaggtatcggagagcctggatttttgggtccacctggg
agaccaggaccacctggcctaccaggaagattgggacctaagggagtacaaggggtccca
ggagagagcctaggggcagagtttggaccaaaaggagaagtaggtgatcagggttttaga
ggacccccaggaaccccaggaccgaaaggattcatgggaatcatgggagctccaggaaat
gagggagtgaggggagataaaggatatagtggtttcccaggctttccaggaagggatggc
tctccaggacgtcctggagtaaaaggaagaagtggactaccaggctttcctggtgttcca
ggatcaaagggagaaagaggtatagtgggcttaccaggacaaaaaggatctgttggtgat
gaaggaatccctggaagacctggaccagaaggacataaaggtcaagttggagacacagga
gaacatggacgaccaggtctcccatcaactgaagtcagtagaggtgatcgtggtgaacct
ggagtgccaggacttcctggatatccaggagagagaggagaatcagggctatcaggatta
cctgggttgaaaggacaacgaggagaccctggatttgaaggttctcctggaatccctggg
agagatggttccaaaggttatcctggagaacctggtggggttggtgaaaaagggttacca
ggctatccaggtcctaaaggagaaccaggtaccacaggcatctctgggtttccaggtctt
ccaggtacaccaggtgtaaaaggagaacgaggtgacgtaggagaaataggtctaatagga
ccaaaaggatatcgaggatttagtgtagatggccagaaaggtgaacgtggtgaagttgga
tatgcaggggatccaggtcgttttgtgattggtccaaagggtgaatctggtaatcctgga
gttcctggtttgattggtccacctggagatgatggattaccaggtgttagtactcctggt
cagcgaggtaaccctgggcctccaggatttgatggcctgttaggtcagaaaggcaggaga
ggtgatcgaggagttgatggaatcacaggttttcctggaccacgagggctaagaggagat
gatggttttcccggtgagcctggtgtaccaggatatgttggaccagatggtgacaagggc
gagagtggtgacaatgttccacccccattgatacatgagcgacccagaggattcccagga
gatcgaggtcttaaagggccaaaaggaattacaggctatcctggaagcattggtcttcct
ggtctggatggtgaccgtggaattccaggtgaacctggacctccaggtcctactggaaga
cctggtcctcaaggcccaaaaggggaaaatggacttcgtggaaataatggagtagaaggt
tttccaggttctcgtggccaacctggagatccaggacagcgtggacctccaggatcccct
gcaccatctcgtgggtactattatactcgtcacagccagtcagtagaaatacctcaatgt
ccaagaggtacgacaccaatgtggaatggttattccctcctctatattatgggaaatgaa
agagctcatggacaggatttaggtggtcctggtagttgtttgagaaggttttcaacaatg
ccatttatgttttgtaaccttaataatgtttgtaatttggcatctcgtaatgactatagt
tactggttaagcacacctgaaccaatgcccatgatgatgactcctattgttggaagagat
attcagcgatatatcagtcgatgtgttgtttgtgaatcttcaacccaggttattgctgtt
catagtcaaactatggaaatacctgactgtcctactggatgggatggactctggattggt
tacagtttcttcatgaatacagatgcaggtgcagaaggaagtggtcagccactgtggtcc
cccggttcttgtctggaagattttcgacccaatcctttcattgagtgtcaaggccatgga
cgatgcaattactacactacagcctacagtttctggcttgcaactattgaaagaaatgct
gacttccgagttccagattcccaaactctgaaagcaggagatcttcgctccagaatctcc
aggtgtaaagtttgtatacggagactgtcaggaggaaataatgacaaagaaattttcctc
ccaatttcatcgtag
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integrated database retrieval system
