Limulus polyphemus (Atlantic horseshoe crab): 106461267
Help
Entry
106461267 CDS
T08968
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04382
Cornified envelope formation
lpol04512
ECM-receptor interaction
lpol04518
Integrin signaling
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106461267
04518 Integrin signaling
106461267
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106461267
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106461267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpol04147
]
106461267
00536 Glycosaminoglycan binding proteins [BR:
lpol00536
]
106461267
Exosome [BR:
lpol04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106461267
Glycosaminoglycan binding proteins [BR:
lpol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106461267
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
FAM81B
Motif
Other DBs
NCBI-GeneID:
106461267
NCBI-ProteinID:
XP_022243841
UniProt:
A0ABM1SJN5
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MKFKKVLFCQFIALFFLLLLIEYSEAAACKGCQVQPCICVGEKGIPGIIGLAGVTGPPGP
PGRMGDEGPYGPYGARGERGEPGALGPKGIRGEQGVPGFSGSAGVPGLPGDEGMRGKQGF
PGCNGTDGAPGQHGIPGIPGVRGPPGPLGDYGMRGDPGEGGINSIGVKGEPGESGRPGPV
GRRGLTGLTGEKGVQGPLGVPGVKGDQGELGPKGPTGEGREGSKGPKGNRGYPGDVGPQG
PTGRRTPDPNIKHFRQGKKGVAGEKGEKGAKGEQGYDGIPGEVVSTTFDIVLDIFTFYSF
MIHSAGQHPNFMKCLMNIKSVHNGPPGPTVSIGEPIPGSPGSQGPVGERGEPGGPGRPGN
VGPVGYRGSPGIPGPQGPPGEPGPPGLSFKGEPGEDGIPGKRGPFGRPGVPGVQGLTGDK
GLPGFTVIGNPGEDGRSGLHGARGLPGQRGDPGFTGPKGIPGIGVYKTGPPGEYGLQGLP
GEPGSPGTPGRDGEPGFQGPRGDDCGYCPPGRHGIAGERGEDGRQGPRGPRGFPGYRGQR
GRKGESGRPGSPGFKGVPGRTGSDGMEGRKGIKGEHGELIYPGATKGAKGESGEVGPPGL
DGIPGKEGPPGPEGFRGFSGAKGQPGNFGDDGSPGFVGPPGPPGRPGPKGKEGDVLYASK
GFKGEKGDPGFDGFDGQVGDKGEKGEPFPLDRLEKDERYIRFRGPKGYPGVPGLKGNRGI
TGAKGYSGLKGLNGRAGQPGRKGASPRGETGRKGYPGIDGDPGLPGSPGLPGIRGKPGLD
GHPGTKGALGSPGDEGQEGPYGLRGPPGRQGDQGDYGIPGFYGEPGVPGPRGDPGLKGSA
GQSGFPGLKGEKGVPGVAGIGTIGPPGQPGFRGFDGQRGQKGNEGPPGRVGFPGEKGRVG
LPGNKGASGIPGKEGIPGTPGIPGKDGLSGLTGMRGEPGEAGAPGNDGLPGQRGLEGLPG
LKGEQGEPGYEGYRGRQGLPGFRGEAGDSGPQGPEGPPGDPSPVGQKGGIGEPGFLGPPG
RPGPPGLPGRLGPKGVQGVPGESLGAEFGPKGEVGDQGFRGPPGTPGPKGFMGIMGAPGN
EGVRGDKGYSGFPGFPGRDGSPGRPGVKGRSGLPGFPGVPGSKGERGIVGLPGQKGSVGD
EGIPGRPGPEGHKGQVGDTGEHGRPGLPSTEVSRGDRGEPGVPGLPGYPGERGESGLSGL
PGLKGQRGDPGFEGSPGIPGRDGSKGYPGEPGGVGEKGLPGYPGPKGEPGTTGISGFPGL
PGTPGVKGERGDVGEIGLIGPKGYRGFSVDGQKGERGEVGYAGDPGRFVIGPKGESGNPG
VPGLIGPPGDDGLPGVSTPGQRGNPGPPGFDGLLGQKGRRGDRGVDGITGFPGPRGLRGD
DGFPGEPGVPGYVGPDGDKGESGDNVPPPLIHERPRGFPGDRGLKGPKGITGYPGSIGLP
GLDGDRGIPGEPGPPGPTGRPGPQGPKGENGLRGNNGVEGFPGSRGQPGDPGQRGPPGSP
APSRGYYYTRHSQSVEIPQCPRGTTPMWNGYSLLYIMGNERAHGQDLGGPGSCLRRFSTM
PFMFCNLNNVCNLASRNDYSYWLSTPEPMPMMMTPIVGRDIQRYISRCVVCESSTQVIAV
HSQTMEIPDCPTGWDGLWIGYSFFMNTDAGAEGSGQPLWSPGSCLEDFRPNPFIECQGHG
RCNYYTTAYSFWLATIERNADFRVPDSQTLKAGDLRSRISRCKVCIRRLSGGNNDKEIFL
PISS
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaaaaaagtattattttgccagtttattgcattgttttttcttcttctcctg
atcgagtacagtgaggctgcggcctgtaaaggttgtcaagttcagccatgcatctgtgtg
ggagagaaaggtattcctggaattataggtcttgcgggagtcacaggtccacctggacca
ccaggtcgcatgggtgatgaaggaccatatggtccatatggtgcacgtggagaaagagga
gagcctggagctttggggcctaaaggaattaggggtgaacagggtgttccaggattcagt
ggatcagctggtgttccgggtttacctggagatgaagggatgcgagggaagcaaggattt
cctggatgtaatgggacagatggagcaccaggtcaacatggtataccaggaattccaggt
gtacggggtccacctggtccacttggagattatgggatgaggggagatccaggagaagga
ggaattaattctattggagttaaaggtgaacctggggaatctggtcgacctggccctgtg
ggccgcagaggactcacaggcttaacaggagagaaaggagttcaaggtccactaggagtt
cctggtgtaaaaggtgatcaaggtgaactagggcctaagggacctacaggagaaggcagg
gaaggatctaaaggcccaaagggtaacaggggttatccaggagatgtaggaccacaaggg
ccaacagggcgaagaactcctgatccaaacattaaacattttaggcaaggaaagaaaggt
gtagcaggtgaaaagggagagaaaggtgctaaaggagaacaaggctatgatgggatacca
ggagaagtagtaagtacaacgtttgatattgtacttgatattttcactttttactctttt
atgattcacagtgcaggacaacatcctaattttatgaagtgtttaatgaacatcaaatct
gtccacaatggtccacctggaccaactgtatctattggtgaacctattcctgggtcccca
ggatctcagggtccagtgggggagaggggggagccaggaggtccaggaagacctggaaat
gtaggacctgtaggatatcgtggttctcctggaataccaggtccacaaggtcctccaggt
gagccaggaccacctggacttagtttcaaaggagagcctggagaagatggaattccagga
aaacgaggtccctttggaagacctggtgtaccaggagtacagggtctaactggtgataaa
ggtctgcctggatttactgttattggtaacccaggagaagatggacgatctggtctgcat
ggggcacgtggacttccaggtcaacggggtgacccaggttttacagggccaaagggtata
cctggaattggtgtgtataaaactggaccacctggtgaatatggacttcaaggccttcct
ggagaaccaggttctccagggactccaggcagagatggagagccaggctttcagggacca
agaggggatgattgtggttactgtccaccaggacggcatggtattgctggagaaagagga
gaagatggacgccaaggacctcgtggcccaaggggtttcccaggatatcgtgggcagcga
ggaagaaaaggagaatctggaaggccaggttcaccaggctttaagggagttccaggtcga
acaggatctgatggtatggaaggacgaaaaggaataaagggtgaacatggagaattgata
tatccaggagctaccaaaggagcaaaaggagaatctggagaggttggtccacctggtctt
gatggaatcccaggaaaagaaggacctccaggtccagaaggttttagaggattttctgga
gcaaaaggacaaccgggaaattttggagatgatggttctccaggatttgtaggtcctcct
ggaccacctggtcgtcctggacctaaaggaaaagaaggggatgttttgtatgctagtaaa
ggttttaaaggagaaaaaggtgatcctggttttgatggctttgatggtcaagttggagat
aagggtgagaaaggagaaccctttcctttggatagattggaaaaagatgaaagatatatt
cgctttagaggtccaaaaggctaccctggtgtacctggtttaaagggaaacagaggtatt
actggtgcgaaaggctattctggtttaaagggtcttaatggtcgtgctggacaacctggc
aggaaaggagcttctcctcgtggtgaaacagggagaaaagggtatcctggtatagatggt
gatcctggacttccaggaagtccaggactgcctggaattagaggaaaaccaggtctagat
ggacatccaggaacaaagggtgcacttggttcacctggagatgaaggacaagaaggtccc
tatggattacgggggcctcctggtcgacaaggagaccaaggagattatggaattcctgga
ttttatggagaacctggggtacctggtcctagaggagatccagggcttaaaggttctgct
ggacaaagtggttttcctggactgaagggggagaaaggagttccaggtgttgctggaata
ggcactattggccctccaggacaacctggattcaggggatttgatggccaaagaggacaa
aaaggcaatgagggaccacctgggagagttggatttcccggagaaaaaggaagagttggt
ctgccaggcaataaaggagcatcaggaattccaggcaaggagggaataccaggaacccct
ggaattcctggaaaagatggattgtcaggattaacaggcatgagaggtgaacctggagaa
gcaggagccccaggaaatgatggattacctggacaacgtggactggaaggtctccctggc
cttaaaggagagcaaggagaaccagggtatgaaggatatcgcggacgccaaggtctacca
ggattcagaggtgaagcaggggattctggacctcaagggcctgagggtccacctggggat
ccttccccagtgggtcagaaaggaggtatcggagagcctggatttttgggtccacctggg
agaccaggaccacctggcctaccaggaagattgggacctaagggagtacaaggggtccca
ggagagagcctaggggcagagtttggaccaaaaggagaagtaggtgatcagggttttaga
ggacccccaggaaccccaggaccgaaaggattcatgggaatcatgggagctccaggaaat
gagggagtgaggggagataaaggatatagtggtttcccaggctttccaggaagggatggc
tctccaggacgtcctggagtaaaaggaagaagtggactaccaggctttcctggtgttcca
ggatcaaagggagaaagaggtatagtgggcttaccaggacaaaaaggatctgttggtgat
gaaggaatccctggaagacctggaccagaaggacataaaggtcaagttggagacacagga
gaacatggacgaccaggtctcccatcaactgaagtcagtagaggtgatcgtggtgaacct
ggagtgccaggacttcctggatatccaggagagagaggagaatcagggctatcaggatta
cctgggttgaaaggacaacgaggagaccctggatttgaaggttctcctggaatccctggg
agagatggttccaaaggttatcctggagaacctggtggggttggtgaaaaagggttacca
ggctatccaggtcctaaaggagaaccaggtaccacaggcatctctgggtttccaggtctt
ccaggtacaccaggtgtaaaaggagaacgaggtgacgtaggagaaataggtctaatagga
ccaaaaggatatcgaggatttagtgtagatggccagaaaggtgaacgtggtgaagttgga
tatgcaggggatccaggtcgttttgtgattggtccaaagggtgaatctggtaatcctgga
gttcctggtttgattggtccacctggagatgatggattaccaggtgttagtactcctggt
cagcgaggtaaccctgggcctccaggatttgatggcctgttaggtcagaaaggcaggaga
ggtgatcgaggagttgatggaatcacaggttttcctggaccacgagggctaagaggagat
gatggttttcccggtgagcctggtgtaccaggatatgttggaccagatggtgacaagggc
gagagtggtgacaatgttccacccccattgatacatgagcgacccagaggattcccagga
gatcgaggtcttaaagggccaaaaggaattacaggctatcctggaagcattggtcttcct
ggtctggatggtgaccgtggaattccaggtgaacctggacctccaggtcctactggaaga
cctggtcctcaaggcccaaaaggggaaaatggacttcgtggaaataatggagtagaaggt
tttccaggttctcgtggccaacctggagatccaggacagcgtggacctccaggatcccct
gcaccatctcgtgggtactattatactcgtcacagccagtcagtagaaatacctcaatgt
ccaagaggtacgacaccaatgtggaatggttattccctcctctatattatgggaaatgaa
agagctcatggacaggatttaggtggtcctggtagttgtttgagaaggttttcaacaatg
ccatttatgttttgtaaccttaataatgtttgtaatttggcatctcgtaatgactatagt
tactggttaagcacacctgaaccaatgcccatgatgatgactcctattgttggaagagat
attcagcgatatatcagtcgatgtgttgtttgtgaatcttcaacccaggttattgctgtt
catagtcaaactatggaaatacctgactgtcctactggatgggatggactctggattggt
tacagtttcttcatgaatacagatgcaggtgcagaaggaagtggtcagccactgtggtcc
cccggttcttgtctggaagattttcgacccaatcctttcattgagtgtcaaggccatgga
cgatgcaattactacactacagcctacagtttctggcttgcaactattgaaagaaatgct
gacttccgagttccagattcccaaactctgaaagcaggagatcttcgctccagaatctcc
aggtgtaaagtttgtatacggagactgtcaggaggaaataatgacaaagaaattttcctc
ccaatttcatcgtag
DBGET
integrated database retrieval system
