Limulus polyphemus (Atlantic horseshoe crab): 106461634
Help
Entry
106461634 CDS
T08968
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03013
Nucleocytoplasmic transport
lpol03015
mRNA surveillance pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106461634
09122 Translation
03013 Nucleocytoplasmic transport
106461634
03015 mRNA surveillance pathway
106461634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106461634
03041 Spliceosome [BR:
lpol03041
]
106461634
03009 Ribosome biogenesis [BR:
lpol03009
]
106461634
03012 Translation factors [BR:
lpol03012
]
106461634
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106461634
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106461634
mRNA cycle factors
Stress granule specific factors
106461634
Spliceosome [BR:
lpol03041
]
Complex C
Other components
EJC/TREX
106461634
Ribosome biogenesis [BR:
lpol03009
]
Eukaryotic type
90S particles
Helicases
106461634
Translation factors [BR:
lpol03012
]
Eukaryotic type
Initiation factors
eIF-4
106461634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
106461634
NCBI-ProteinID:
XP_013776925
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MASALGRRIVQNEDLSNVEFETSEDVEVISAFDNMGLREDLLRGIYAYGFERPSAIQQRS
IKPVIKGRDVIAQAQSGTGKTATFSIGVLQTIDTQLRETQALILSPTRELAVQIQKVILA
LGDYMNVQCHACIGGTNLGEDIRKLDYGQHVISGTPGRVFDMIRRRNLRTRAIKMLVLDE
ADEMLNKGFKEQIYDVYRYLPPCTQVLLISATLPHEILEMTNKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMH
GDMPQRERDTIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKNDDIRILRDIEQYYSTQVDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggctctaggtaggagaattgtacaaaatgaagatctttctaatgttgaattc
gaaacaagtgaagatgttgaagttatttcagcatttgacaatatgggactacgagaagat
cttttaagggggatttatgcttatggatttgagaggccttcagcaattcagcagagatca
attaaaccagttattaaaggaagagatgttattgcccaggctcagtctggaactggaaaa
acagctactttctccattggtgttcttcagaccatagatacccagttgcgtgaaacacaa
gctttaatattgtctcctacacgagaattggctgtccagatacaaaaggtaatcctagct
cttggagactatatgaatgtacagtgccatgcatgtatcggaggaacaaatttgggtgaa
gatataagaaagttagattatggacaacatgtgatatctggcacaccaggcagagtgttt
gacatgattcgtcgaagaaacttgagaacgagagctatcaaaatgctggttctggatgaa
gctgatgaaatgttaaataaaggttttaaggagcagatttatgatgtctatcgttattta
ccaccttgtactcaagttctcttaatttctgccactctaccacatgaaatattggagatg
actaacaagtttatgacagatcctattcgtatattggtaaaacgtgatgaattgacattg
gaaggaattaaacaattctttgtggctgtggaacgtgaagagtggaaatttgacacactg
tgtgacctttatgacaccctcactataacacaggctgttattttctgtaacacaaaaagg
aaggtagactggctgacagagaaaatgcgtgaagctaacttcacagtatcatcgatgcat
ggtgacatgcctcaaagggaaagagatactataatgaaagagtttcgttctggacagagc
cgagtattgatcacaacagatgtatgggctcgaggaattgatgtgcagcaggtgtcactt
gttattaactatgatctaccaaataacagagagttatatatccacaggattggtcgttct
ggacgttttggaaggaagggtgtggcaattaactttgtaaaaaatgatgacatcaggatt
cttcgagatattgaacagtactacagtacacaggtggatgaaatgcccatgaatgtggca
gatctcatctga
DBGET
integrated database retrieval system
