KEGG   Limulus polyphemus (Atlantic horseshoe crab): 106461767
Entry
106461767         CDS       T08968                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein 1, mitochondrial-like isoform X1
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
lpol  Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:lpol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lpol03016]
    106461767
   03029 Mitochondrial biogenesis [BR:lpol03029]
    106461767
Transfer RNA biogenesis [BR:lpol03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    106461767
Mitochondrial biogenesis [BR:lpol03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    106461767
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR PPR_1 NEMO GMC_oxred_N DUF6568
Other DBs
NCBI-GeneID: 106461767
NCBI-ProteinID: XP_013777072
LinkDB
Position
Unknown
AA seq 699 aa
MLKKYHIFYQMCVICKRSNTRFISINLLRSSFVLKKENENYALQQNKLQYSTCASDILGR
LKPNSDTFGTLDQDLEKNLNSKGKNPSSKVQLKGRKGKPQDVTDSFKISVSDKNSETELT
DSDVFGTVADAESVIKYQTESDLHTDEPDDDDVFISYGKKMSPKEYGDKMKELIKERKLK
DALQLYNQMIKEDRVKPVKYIYTLLIGACGRVGYTKMAFKLFKHMRDRGMTPSPATLTGL
FNACAETPFLNYGLQKAIHLREQIMEKGWQPSNITFHSMIKAFGRCGDLETAFSLADEMT
ENGHVVTAETFNFLLQACITNKEAGFTHAIQVFRFMKFSTTLPEVHAFNLLLRAVRDCGI
GPPDVSKQLLEEWQKESYSLSRKAKDPKPSKEILKISSSKFVQKELVSESSDKTRSITRE
EEGNKSPAIINPESSICVLEKSETPNLLLSSGNGDNQQVIGLRNVEKPEDRLALIGGLDG
FLQLMIASKAKPDIRTFSLLLETLPSTTESEVALLQWIDKLQLSPDTDFFNLLIKKRNYR
KDFFGAKEVLSLIRKYGLYPDIVTFGVLALGCKTKNLGLQLLEEMEAAGFRPNVEIFGSL
VRNATFIPDFWYLISLMNKMKDLEVEPDPPVLKCLEYIRQKARKILAAQDRGEKVPLPYT
KKYVKEGFRVYNLYYKQWLKNTYVEIPQHPWAQYQQKTP
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgttgaaaaaatatcacatattttatcaaatgtgtgtcatttgtaaacgaagtaataca
agattcatcagtataaacctgcttagaagcagctttgttctcaagaaagaaaatgaaaat
tatgcactccagcaaaacaagctgcagtacagtacatgtgcatcagacatcctgggcagg
ttaaaaccaaattctgatacttttggcacccttgatcaggacttggagaaaaacttaaat
agtaagggtaaaaatccatcttctaaagttcaactaaaggggagaaaaggtaaaccacag
gatgtaacagattcattcaaaatttctgtctctgataaaaactctgagactgagttgact
gacagtgatgtatttggaactgtagcagatgctgaatcagttattaaatatcaaacagaa
tcagaccttcacacagatgaacctgatgatgatgatgtctttatcagctatggaaaaaaa
atgtcaccaaaagagtatggggacaaaatgaaggaactcattaaagaacggaagctgaaa
gatgctctccagctgtacaaccaaatgataaaagaagaccgtgtcaagccagtgaaatac
atttatacattgttgattggtgcatgtggaagagtaggatatacaaagatggctttcaag
ttattcaaacatatgagagatcgtggtatgacaccatcacctgcaactctaactggttta
tttaatgcctgtgctgaaacacctttccttaattatggtctacaaaaggctattcattta
cgagaacaaataatggaaaaagggtggcaacctagcaatatcactttccattctatgatc
aaggcatttggacgatgtggagatctggagacagctttttcattagcagatgaaatgact
gaaaatggacatgttgttactgcagagacctttaatttcctattacaagcttgtataaca
aataaagaagctggttttactcatgccattcaggtgttccgattcatgaaattttctaca
actctgcctgaagttcatgcatttaatcttctccttcgggctgttcgagattgtggcatt
ggccctccagatgtatctaagcaacttttagaagaatggcagaaggagtcatatagtctt
tcaagaaaagccaaggaccctaaaccttccaaagaaattctgaagataagttcatccaag
tttgttcagaaagaattagtgagtgaatcaagtgataaaactagaagcattactagggaa
gaagagggaaacaaatccccagccatcatcaatccagagagtagtatatgtgttctggaa
aagagtgaaacaccaaacttgttgctttcttcaggaaatggagacaaccagcaggttata
ggtttgagaaacgtggagaaacctgaagacagattagctttgattgggggacttgatggt
ttcctgcaactgatgattgcttctaaggctaaacctgatattagaactttctcactttta
ctggaaaccctgccctcaaccacagaaagtgaagtggcactacttcaatggattgataaa
cttcaactaagccctgacactgacttctttaatcttcttatcaagaaaagaaactataga
aaagatttttttggtgcaaaggaagtattatcactcattcgcaagtatggattgtatcca
gatattgtgacttttggagttttggccttgggatgcaaaacaaaaaatttgggtctccaa
cttttagaagaaatggaggctgctggtttcagaccaaatgtagaaatatttggatcactt
gtacgaaatgccacttttattcctgacttttggtacctcatctcacttatgaataagatg
aaagatttagaggtagaacctgatcctcctgtcctcaagtgtttagaatacattcgacag
aaagcaagaaagatccttgcagctcaggaccgaggagaaaaggtaccattaccatacacg
aagaaatatgttaaagaaggcttccgtgtgtataacttgtactataagcagtggttaaaa
aatacttatgttgaaatacctcaacatccttgggcacaatatcagcaaaaaactccatag

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