Limulus polyphemus (Atlantic horseshoe crab): 106461789
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Entry
106461789 CDS
T08968
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpol03009
]
106461789
Enzymes [BR:
lpol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106461789
Ribosome biogenesis [BR:
lpol03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106461789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
PCMT
FtsJ
GCD14
Motif
Other DBs
NCBI-GeneID:
106461789
NCBI-ProteinID:
XP_013777096
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MGRKAKFQEKPRKGPGKKTKKQKPPNLLHLVGAKEQDDSSQSLTRRARKHLKKLHQIEAK
RVTSKQKKEQNKRENITSEGETASESDVEDDVEENLKGFTDQNQDWLIPKGKKRKLVESD
HDEEDFEGQDSDDVLKDEFDEDESNSDNEKQDEEEELLPVEKASKKLQKKQKEMRKLAEE
ELKTNIAESETYVLPSGQEIEKETAQSPDLAVISQRIKDIVHVLSDFASRREDGRSRNDY
VDFLRKDLCLYYGYNDFMMEKLMELFPTAELIEVLEANEVQRPVTIRTNTLKTRRRDLAQ
ALINRSVNLDPVGKWSKVGLVIYDSQVPIGATPEYLAGHYILQGAASLLPVMALAPQVNE
KVLDMCAAPGGKTTHIASLMKNTGVLFANDIHQDRAKATVGNIHRLGITNTIVCCHDGRK
FPKVITGFDRVLLDAPCSGTGVVAKDPEVKTSKDAKDIQRCSHLQKELILAAIDCLDAHS
KSGGYLVYSTCSILPEENEWVIDFALKKRNVKVVPTGLDFGKEGLAKYREYRFHPSLKHT
RRFYPHTQNMDGFFVAKLKKFSNLIPNQDKLGKQENENTSMSKEKEAKLLDKPNEKEKDS
EDSPQVSTSKYTKSTSKVTPSSKTVHRKKFAWRTKKPDQERIKGIRPHLKKKPKLSKK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaagcaaagttccaagaaaagcccagaaaaggaccaggaaagaagactaaa
aagcaaaaacccccaaatctgcttcatttagttggtgctaaggaacaagatgattcatct
cagtcacttactagaagagcaagaaaacatctcaaaaaacttcatcaaatcgaggctaaa
agggttacatccaagcagaaaaaagagcagaataaacgtgaaaacattacatctgaaggt
gagactgcatcagaatctgatgtcgaagatgatgtggaagagaacttaaaaggtttcaca
gatcaaaaccaagattggttaattccaaaagggaaaaaaagaaaactcgttgaatctgat
catgatgaagaggattttgaaggacaggactctgatgacgtgctgaaggatgaatttgat
gaggatgagtcaaattcggataatgaaaaacaggatgaagaagaagagttacttcctgtt
gagaaagcttccaaaaaactacagaaaaagcagaaagaaatgaggaaattggcagaagaa
gaactaaaaacaaacattgctgaaagtgaaacctatgtcctacctagtggacaggaaata
gaaaaggaaacagctcaatctccagatctggctgtcatcagtcaaagaattaaggatata
gttcatgtgctttcagattttgctagtagaagagaagatggaagatcaagaaatgactat
gtggatttcttaagaaaagacttgtgtctttactatggttacaatgacttcatgatggag
aagttgatggaactcttccctacggcggagttgattgaagtgcttgaagctaatgaagtt
caaaggcctgtcaccatccggaccaacacgttgaaaacccgaagaagggacttggcacag
gccttgatcaatcgtagtgtaaacttggatcctgttggaaagtggtctaaagtaggatta
gtgatttatgactctcaggtgcctataggtgcaaccccagagtatttagctggtcattac
atcctccagggggcagcatcactacttccagtgatggccctggctccacaagtaaatgag
aaggttcttgacatgtgtgcagcccctggtggtaaaaccactcatatagcttctcttatg
aagaatacgggagttctgtttgctaatgatattcaccaagatcgagctaaagccactgtt
ggaaacatccaccgcttaggtatcaccaacaccatagtttgctgtcatgatggaagaaag
tttcccaaggtcattactggttttgatagggttcttcttgatgctccttgcagtggaaca
ggagttgttgctaaagatcccgaagtcaagacaagcaaagatgcaaaagatattcaaaga
tgttctcaccttcaaaaggagttaattctggctgcaatagactgtcttgatgcacactcc
aagtctggaggatatcttgtttattctacatgttctatactgccagaagaaaatgaatgg
gtgatagattttgctttaaaaaaacgaaatgtgaaagttgtaccaacaggactggatttt
ggaaaggaaggcttagcgaagtacagagaatatagatttcatccatctttgaaacacact
cgaagattttatcctcacacacaaaatatggatggattctttgttgccaagttgaagaaa
ttttcaaaccttattcctaatcaagataaacttggcaaacaggaaaatgagaacacaagc
atgtctaaagaaaaagaagcaaaattattggacaagcctaatgagaaagaaaaagatagt
gaagatagtccacaggtttcaacctcaaaatatactaaaagtacaagtaaagtaacacca
agttctaaaacagtccacaggaaaaagtttgcatggagaaccaaaaagccagaccaagag
aggataaaagggatcagaccacacctaaagaaaaaaccaaagcttagtaaaaaataa
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