Limulus polyphemus (Atlantic horseshoe crab): 106462053
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Entry
106462053 CDS
T08968
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106462053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106462053
03009 Ribosome biogenesis [BR:
lpol03009
]
106462053
03036 Chromosome and associated proteins [BR:
lpol03036
]
106462053
Enzymes [BR:
lpol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
106462053
Messenger RNA biogenesis [BR:
lpol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
106462053
Ribosome biogenesis [BR:
lpol03009
]
Eukaryotic type
90S particles
RNase
106462053
Prokaryotic type
rRNA processing factors
106462053
Chromosome and associated proteins [BR:
lpol03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
106462053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
106462053
NCBI-ProteinID:
XP_013777383
UniProt:
A0ABM1B978
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MIFKINMTTPRYGGGHQYQPRCNVVCAGPPRNPGSIRNFFPSASPQVQPTLSRPPLNPDQ
YTLNPGAVSNQSGFPSPALPPFQSHDEIIHDYGQQIPVVGTRWMQSKTYHSSYFYNSQKV
SNTNLLSSVQSYQRPVSTQHIEFTGQNVSPQTPAVKSQDFSSVPGHYSCQSLNVLPPPWS
VESDKYVQENTDHLSQSYECRVSWSVNENNRQVNASSRILNQSCSPYPSSYKDCNQEAEM
ADFKGVQLISNSHSRPFNRNPVRQREPTWVTSSSSSTSNSQKYSEPSEAKTLHRSDTNTF
IKTAQHDNSKSLRNLDSENRKRREDLKHYTKYESQFNRSDESSSYKQREKRRYSSRSHTK
ELHDVKHSRTTYERSSKDRRSDRSHSSGREYNRSKRTLATQSYCYRQSGRDHGWENKALD
YSDTNSESWKSNGKTHLMTKRRSVSEKRVKSLSPEIKHHSKDYKYFNPLKRPKIKNDDTK
DQEYSCSSNEFSNDERTGDESEIDQTSWLRCSPADLYYQRNIQSSCMYGTEKLKILHNTF
RSELVERTDRIKVNKPKYEAPPRKTKIYHLTKEKSESCSSSSNEECESEEEEEEENPLKE
LERKKLHPDRLHEELWYNDPGEMNDGPLCRCSAKAQRSGIRHGIYSGEALLPSCDPNSNN
SSRLHHYLVTMSPHTNFLTKCPTLIKHDGHEFIFEGFSMFSHEPLGNIPTCRVIRFNIEY
TVVYLEEKFPEHFTVEGLELFSKYLFEGILELVDLNWKAHGDPEGCPRFHFMPRFARALE
DSGKELLSMNVVLQYLLTSNIPLVEETQLKKIVQISQYDWQDIADEVKGMIVTCPGKKPC
SLRVDQLDREICDPDKGIFPEVVHFGMRPPQLCYAGNPTYQKAWRDYVKFRHLLANKPKI
SYADRHKLLQKEMRLQEMRMKSDLKRDVTVVVSSKNFYRTGIMCDIVQHAMLLPVLVCHL
RFHLSLSLLEKEIGHQFKNRFLLQLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDR
RIHYVNTRKRGINTLINIMSRFGQREETTSNINHNERLEFLGDAVVEFLSSIHLFYMFPD
LEEGGLATYRAAVVQNQHLAVLAKKLQLEKYMLYAHGSDLCHDLELRHAMANCFEALMGA
LFLDGNIEVADRVFSRTLFSEPELMDVWVNYPPHPLQEQEPEGDRQWIESVPLLTKLHEF
EKSTGIEFTHIRLLARAFTHRSVGYNNLTLGSNQRLEFLGDTVLQLVASEYLYKYFPEHH
EGHLSLLRSSLVNNRTQSVVCDDLGMVEFAIYPYPKGELKTKDRADLLEAFLGALYVDKG
LKYCRYFCQVCFFPRLQDFIMNQDWNDPKSKLQQCCLTLRSMDGGEPDIPVYKVVECKGP
TNTRVYTVAVYFRGQRLATGTGHSIQQAEMAAAHNALKASKNLFPQLSHQRRVIEQTKKH
DSSKKKRKK
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgatatttaaaataaacatgacaacaccaagatatggtggtggacaccagtatcaacca
agatgcaatgtagtttgtgccggaccaccaagaaaccccggaagtatcagaaacttcttt
ccttcggcatctcctcaagttcagccaacactttcaaggccaccacttaacccagaccaa
tacacgttaaacccaggagctgtatccaatcagtcaggttttccatccccagcattgcca
cctttccagagccatgatgagattattcatgattatggtcagcagattcctgtagttgga
actcggtggatgcaatcgaaaacatatcactcaagttacttttataactcacagaaagta
agtaatacaaatcttctgtcaagtgtgcagtcttaccagagaccagtttctacccagcat
atagaatttacaggccagaatgtatctccacagactccggctgtaaaatctcaagatttt
tcttcagttcctggtcattacagctgtcagtcactgaatgtacttccaccaccttggtca
gtagaatctgataaatatgttcaggaaaataccgaccacctttcacagtcttacgagtgt
agagtttcgtggtctgttaatgagaacaataggcaggtaaatgcttcatctaggatatta
aatcaaagttgctcgccatatccttcatcttataaagactgtaatcaggaagcggaaatg
gctgactttaaaggagtacaacttataagtaacagtcattctcgcccttttaacagaaat
cctgtaagacaaagagagccaacttgggtaacttcatcaagcagtagcacatctaacagc
cagaagtatagtgaaccatcagaagctaaaacgttgcacagaagtgacacaaacaccttt
atcaaaactgcacaacatgataacagtaaatcccttaggaacttagattcagaaaataga
aaaagaagagaggacttgaaacattatactaaatatgaaagtcagtttaatagaagtgat
gaaagctcatcttataagcaaagggaaaaaaggaggtattctagtagaagtcatactaag
gaattgcatgatgtcaaacacagtagaacaacatatgaaagaagtagtaaagacagaagg
tctgacagaagtcattcatctgggcgagagtacaacagatcaaagagaacattagcaaca
caaagttattgttatcgccaatcaggaagagaccatggttgggaaaataaagcattagat
tatagtgatactaattctgaaagttggaaatcaaatggtaaaactcatttaatgacaaaa
agaagaagtgtaagtgagaaaagagtgaaaagtttaagtccagaaattaaacaccatagt
aaagattacaaatactttaacccattgaaaagaccaaaaatcaaaaatgatgatacaaaa
gaccaagagtattcatgttccagtaatgagttttcaaatgatgaaagaactggtgacgaa
agtgaaatagatcaaacatcatggcttaggtgctcaccagctgatttatactatcagaga
aacattcagagttcttgtatgtatggaactgaaaagttgaaaattcttcataatactttt
cgatcagaacttgtagaacgaacagacaggatcaaggttaataaaccaaaatatgaagct
ccaccaaggaaaacaaaaatttatcatctgactaaagaaaaatcagaatcttgcagcagt
agcagcaatgaagagtgtgaaagtgaagaagaagaagaagaagagaatcccttgaaggaa
cttgaaagaaagaaacttcatcctgatcgacttcatgaagagctttggtacaatgaccca
ggagaaatgaatgatggaccattgtgccgatgtagtgcaaaggctcaacgttcaggtatt
cgacatggaatttattctggagaggctcttcttccatcttgtgatccaaatagcaacaat
tcatctagacttcatcactatttagtcacaatgtctcctcacactaactttttaacaaag
tgtcccacattaattaaacatgatggtcatgaatttatatttgaaggattttctatgttt
tctcacgaacctttgggaaatataccaacttgcagagttatacgttttaatattgagtac
actgtggtatatttagaagaaaaatttccagaacattttactgtagaaggattagaactt
ttttcaaagtaccttttcgaagggattctggagttagtggacttaaattggaaagcacat
ggtgatcctgagggatgtcccagatttcattttatgccccgctttgcacgtgctcttgaa
gatagtggaaaggaactattgtcaatgaatgtggttttgcaatatcttttgacaagcaac
ataccattggttgaagaaacacaacttaaaaaaatagttcagattagccagtatgattgg
caagatattgcagatgaagtaaaagggatgattgtaacttgtccaggcaaaaaaccatgt
tctcttcgtgttgatcagcttgatcgagaaatatgtgacccagataaaggtatttttcct
gaagttgttcattttggtatgagaccacctcaactgtgttatgccggtaatcccacttat
caaaaagcttggcgagattatgttaaatttcgccatttattagctaataagcccaagata
tcatatgctgatcgtcataaactccttcagaaagaaatgagattgcaagagatgagaatg
aaaagtgacttaaaaagagatgttactgttgttgtcagtagcaaaaacttttatagaact
ggtattatgtgtgatattgtgcaacatgcaatgttactcccagtgcttgtgtgtcatctc
cgattccatttgtccttaagtttactggaaaaagagataggtcatcaatttaagaaccgt
tttcttctgcagctggcactcactcatccgtcatatcgcgaaaattttggcactaaccct
gatcatgcaagaaattccctgacaaattgcggcatccgacaaccagaatatggtgataga
agaattcattatgtgaatactagaaaacgaggaataaacacattaatcaatattatgtct
cgttttggtcaacgtgaagaaacaacatccaacataaaccataatgaaaggctcgaattt
ttgggagatgctgttgttgagtttctttctagcattcatctattttacatgtttcctgat
ctggaagaaggtggacttgctacatacagggctgctgttgttcagaaccagcatcttgct
gttttggccaagaagcttcaactggagaagtacatgctttatgcacatggatcagatctc
tgccatgatcttgagttaagacatgctatggctaattgctttgaagctttaatgggagca
ttatttcttgatggaaatattgaagtggctgacagagtcttttctcgaactcttttcagt
gagcctgaattgatggatgtgtgggtaaactatccacctcatccattacaggagcaggaa
cctgaaggggaccgtcagtggatagagtctgtacctcttctgacaaaactgcatgagttt
gaaaaatctacaggaattgaattcacacacatccgtttacttgctagagcttttactcat
cgtagtgttggatataacaatctaactcttggatccaaccagcgattggagttcttagga
gacaccgttttgcaattagttgcctcagaatacttgtacaagtactttccagaacatcat
gaagggcatctctctttgcttcggagttccttagtaaataatcggactcagtcagtagtg
tgtgatgaccttggcatggtagaatttgctatttatccatatcccaaaggtgaacttaaa
actaaagaccgagccgatcttttagaggctttccttggtgctctgtatgttgacaaagga
ctcaagtattgtcgttatttttgccaggtttgtttttttccacgtcttcaggattttatc
atgaatcaggactggaatgatcctaagtctaaacttcagcaatgctgtttaaccctcagg
tccatggatggtggagagccagatattcctgtatataaagttgtagagtgtaaaggccca
actaacacaagagtttatactgttgctgtttactttagaggccaacgacttgcaacagga
acaggtcatagtatccaacaagctgagatggcagcagctcacaatgctctgaaagcatca
aaaaatctgttcccacaacttagtcatcaacgcagagtcatagaacagacaaaaaagcat
gactcctctaaaaagaaaagaaaaaagtga
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integrated database retrieval system
