Limulus polyphemus (Atlantic horseshoe crab): 106462072
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Entry
106462072 CDS
T08968
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like isoform X2
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpol03009
]
106462072
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106462072
Ribosome biogenesis [BR:
lpol03009
]
Eukaryotic type
Pre-60S particles
Helicases
106462072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Pox_int_trans
Motif
Other DBs
NCBI-GeneID:
106462072
NCBI-ProteinID:
XP_013777410
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MDIMKRTTVQDMEEDSWESLNLNVELLSAINQFNFKYMTPVQATCIPQFLSKKDVAVEAV
TGSGKTLAFLIPVLEILLQRSKNLKKHEVGAIIISPTRELALQTDEVLAQLLIKLPQFTH
QLVTGGYNPMFDIEHFKETGGNILVRTPGRLMDLLMSKNSDFNLASQVKSLEVLILDEAD
RLLELGFETTLNMILKYLPKQRRTGLFSATQTHEVDHLIRVGLRNPVCITVKEKGINENN
AIRTPSSLTNYYTICDPNQKFNCLVSFLRDHQQEKLIVFFSTCASVDYFSRLLEGILKKL
TIISIHRKMRKKRHNLLKNFKDLNRGILLCTDLMARGIDVPDVHWVVQYDPPCSASAFVH
RCGRTARIGNKGQALLLLLPTEETYISFLQLNQKVILEKKDLGETFFNVLPKVKKMSMRD
RDIFEKGKRAFVSYIQAYSKHECHLLFKVKDLDLGKLAEGFGLLKMPNMPEVKRQNVEGF
VATNVDIQSIPFRDKRKEKERQNNLKNFHKMGPRKKDFNLTKKLPRLKSKEKIFGKKEVN
TLKQKRRKTCSWSNDELEDLAHDARLIKKLRKGKISKEAFETQFDC
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggatatcatgaaaagaaccactgtacaagacatggaggaagatagttgggaatcactg
aacttaaatgttgaactactgtcagctataaaccaatttaatttcaagtatatgacacca
gttcaggctacttgtatacctcaatttctgtctaaaaaggatgtagctgtggaagctgtg
acgggtagtgggaaaactctggcatttcttataccagttttagaaatattattacagaga
tccaagaacttaaagaagcatgaggtaggggcaatcatcatttcaccaacgcgagaatta
gccttgcaaactgatgaagtgcttgcacagcttcttatcaagttacctcagtttacccat
caacttgtaacaggtggttacaatccaatgtttgatattgaacactttaaagaaactgga
ggaaacattttagtgcgaactccaggtaggttgatggatctcctgatgagcaagaattca
gacttcaacctagcatcacaagtaaaatctcttgaggttcttatacttgatgaagcagat
agactgctggagctaggttttgaaactacgttgaatatgatcctcaagtacctcccaaaa
caacgaaggactggtttgttttcagctacacagacacatgaagttgatcatttaattcgg
gttggtcttcgaaatccagtttgtatcactgtgaaggagaaaggtatcaatgaaaacaat
gcaatacggaccccatcatctcttacaaattattacacaatttgtgatcctaatcagaaa
ttcaactgtttagtgtcatttcttcgtgatcatcagcaagagaaacttattgtgtttttt
agtacttgtgcttctgttgactacttttctagactccttgaaggaatactgaagaaactc
accataatcagcattcatagaaagatgaggaaaaaacgtcacaacctgcttaagaacttc
aaagatcttaatagaggaattctactgtgtacagatctcatggctcgaggtattgatgta
ccagatgtccactgggttgttcagtatgatcccccttgctcagcaagtgcctttgttcat
cgctgtggaagaactgccagaattggaaacaaaggacaagcactactgttgttgttaccc
acagaagaaacgtatataagttttctccaactgaatcaaaaggtaattttggagaagaag
gacctgggagagacattttttaatgttctacctaaagtgaagaaaatgagcatgcgagac
agagacatctttgagaaaggaaaaagagcatttgtatcatatatacaagcctattccaag
catgaatgtcatctcctgtttaaggtgaaagatttagacctcgggaaattagctgaggga
tttggactacttaagatgccaaacatgccagaagtgaaaagacaaaatgtggaaggcttt
gttgcaactaatgtggatatccagagtattcctttcagggacaaaagaaaagaaaaggaa
cgtcagaataatctgaaaaattttcataaaatgggccccaggaaaaaagatttcaacttg
acaaaaaagttacctagactaaagagtaaagaaaagatatttggtaaaaaggaagtaaat
acgctgaagcagaaaagaagaaagacttgcagttggagcaatgatgaattagaagaccta
gctcatgatgctcgcttgattaaaaagcttagaaaaggaaagataagtaaagaagcattt
gaaacccagtttgactgttaa
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