Limulus polyphemus (Atlantic horseshoe crab): 106462224
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Entry
106462224 CDS
T08968
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106462224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lpol04091
]
106462224
Lectins [BR:
lpol04091
]
C-Type lectins
Lecticans
106462224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Frem_N
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
106462224
NCBI-ProteinID:
XP_013777577
LinkDB
All DBs
Position
Unknown
AA seq
3098 aa
AA seq
DB search
MCWTVSFIFCILVSFAIQTHEYLPGVPLSEQDVVKTNSGIKVPFGRAVYVDPVKDLEIRV
RDGDRCTVKVIQNDPLSQRPGKLTPSHFPCKFDIREVQYSHFGARTPPQDMVKLLLRYDT
ADDTIIVPFTINVQVLFDQLEVVTRNMPITVDNLLGVSTPIDNKALQFTYDKNKQDCEVM
VLESEELPRYGEVVNISNSGVRQNCDSFLQADIRYRHTSYSSPNQDYIPMVVRVTDSNGN
LLKHEYFQVTVRIKDGQPNTPPQPSFSSLLLMDVNQFIMTAITPQILSAQDSETIPEKLI
FNITSPLSYGEGQIVSTDDQNVPISSFYQKDLDDLKIAYKPPASDSDIKRTFGVEMEVID
AEGLNSDPFSLMIIVHPKNTLAPLATRNSGLMLFEGQSRKLQSSKNLEIADENNIDDVIV
SVKDGLRHGQLLLMGSPVKQFSPADLDAGLVTYQHDGSDTYSDNIIFKLDDGVKQVEFLF
PITVYPEDDEPPVLNVNTGVTIRKEEMKITPFVLSATDVDSDEFRIKFELKNPRSSEGEI
FMKQTEAPIDPQNWQFVNGSYKRAITTWTQQDLLEGRIFYRRTGDHKTEPIIDRIKFRVS
DDNIPPNESGDKEFVIKIMPLDNIPPEPYLGTPLEIVVDEFEKTVITKKHLRFTDMDTKD
RYLKYVITRKPYNTDPNNPLDPGKIVLSETPDQEVTNFTQAQVNHHKIAYKPPSVELGII
PRIIQFEFQVEDSIGNVLPGQTFTIRLKPVDNKPPVIYNKGLEVFENGFVTLSLNVLDAD
DVDTEPNSIVFTVKQVPNHGILNYGIKNLRKGATFTKKDIANGLVSYINNGAEKDSDKIE
LEISDGIHKVPITINIQIRPIDDEAPALEIAPGTIGASVNVKEGGKAPITTKIIKASDPD
TEDLKITFLIDYPPRQGRIELNGVNTDRFTQGDMESERVFYIHNGAEIGETSTVDTFNLS
ISDMSNDLLLGGNKIDYIHVKVNIEPVDSVAPVVTVKPTLVVPEANKATITLFHLNSTDR
DTKDDNIVCTILVQPLHGYVENISPGPGSERSRAGIPVTAFKIADIKSGFINYVQSVHKG
VEPTNDRFTFSCSDGINFSPRSIFPVQIEPTNDEIPQIFMREFVVEEGMKLSIDLPILNA
DDLDVPKNTLTFRIKNKPKHGKIVVQLATGDEIIDSFTLDQISYGSNIMYEHDDSETKED
EFELEVSDGLHNTSKKVKVMIYPVDDETPRLAINDGLEVGKGEGKLVTNRLLKAEDIDTD
DSTIMFVVRQPPRHGDFILLDPISRLPYLNLTKGTNFTQGDIDEELIMYVHTGREGVRDL
IKFDVTDGRNTYVDRYFWISVEGVDLVYPDVINKGVELPEGGRVTLTTDVLSTSDLNSDD
EYLSFIITRDPTRGHLESTDNPGIPVTLFTQMDLAGNKIYYVHTDGEETKMDSFEFEVTD
GYNSVFRTFRISISDVDNKKPIVFINKLRILESGEGLITPFELKVEDRDTDDKKLKLTIT
QVPVHGKILYNNLYPITVFTMEDLRENRISYHHDGSESKEDNFSFTLTDGTHVGFYVYPD
TAKETRRPQTVEIEIVPVDNNVPQVVLNRGASAIGPLHNGQLGYRFTNKVLRAEDSDSQE
IVIQYIITVPPKHGVIINKALGNESISNFTQGDINGMVIYYILDDLENATSDIFHFKVVD
AGANELPGQDFRLNWAWISLEYDTYEVNETKKYLKVKLFRRGYLGETSFIGIKTKNITAK
QGEDFGKHYAEQVQFSPGQTEAYWKLRITDDSLFENGEEFEILLEEPVMAATEYPDKAVV
TILDDEDVSTVEFPEPEYEVKENVGEILVPVERKGDLSKEMMVVCSTEAGSATGTIPASV
QSFSDFISRPESHKSVIRFNQGEELKYCRLVIIDDSLYEDDESFKIRLSQPLGGKVGVQN
VTKVIIAPDKHDVPFFYFGEPEYYVDESDGYVEVKVWRTGTDLSKPASVTVRSKPSDPPS
AEAGNDYVGTGKTLNFPPGATLETFRITILDDLGQPVLEGPETFELVLRMPMNAELGKPS
HAVVTINDSLSDLPSMQFRDTEYTALENDGEVTAYIIRSGDLGQVSTVHCYTRQDTAKVT
EDYVERPNTNESLVIFEPGDREKPCTVILVNDSIHEQEEIFRLRLGSPSSETAGGALVGP
KNVTKITIKDKGDKPVIKFEKNRYNVKEPRHPDDIAVVEVPVIRRGDLSKTSHVRVHTKD
GSAKSGKDYVPFSRELEFGQNVSRIIVEIEILYDEEKEHREALTLHLRPDRDMIADIEDS
KVIIYIQEVNIVADVTFPFEPMVVSLKDYDDAASASSSPIPGYPVVCITSCNPKHPDSDR
TGTLCSSEGINDNLTEFRWRVAAPSGHDGVTSELRNIESRTFFTGTHDITLDSIYFAPGS
RVQCAARAVNQDGDPGLELESKTVVISYSNGLCSPRIEGSTGAEPFTAKMRYTGPDDQDY
PNLIKLTVVIPHRDGMLPAISTQPLSNFELTLSPDSLRVGTHKCSNLIDYQEVRTKHGFL
TNDTKNPNVIGEVEPYQYSSDLRTDPTLRFYRNLDLEACMWEFTAYYDMSELVTDCGGTI
TSDGQVLNLVQSFVSVRVPLYVSYIFHSPVATGGWQHNDLISHMRLTFVYDTAILWKNGI
GAPEESQLQGNLYPTGMRIREDGRLVVNFRTEPRFKGRFVLSHPGSGLTSMVMSQDQPEL
TFTLELIRSEPTYAQPEQQWEFVSDLAVRDYSGNYHVKLIPCTATDTMEYSHSLECNPRD
PIVFDLQIRFQQVSDPVPAEFSLNTHFHLMRKKALWLSDGSMGFGEDSDVSFVPGDTVYG
RIMVDPVQNLGESFYMTIEKCFLCTGEDGYVPKYNPDNYEYGCMAESPNLLHTFKIIDRG
APNTVKNYFRNVSFNAVLAVDDVEPEVANLKNQPGADGFRFDSAPLFQVSSGTQWFVHCI
YTVRSEKNAARGIGKRSIPYHSLQNAGAALSRRKRASKDVDGVGKDGLGTNMNRIVLQFS
RDSGTTAEEEEASGDSGVFQDGANKENNETGLPLIPVIAGIVCSLIVVIIVAVVLVRRKW
NSENKFPPSHAATVVASNGQTRLVVPSYNITDGDNTEV
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atgtgttggactgtaagctttatattttgcattctcgtctcattcgccatccaaacacac
gaatacctaccaggtgttcctttgagcgagcaggacgtggtcaaaactaatagtggtata
aaagtaccctttggcagggctgtttatgtcgaccccgtgaaagatctggaaatcagggtc
agagatggagatagatgtactgtcaaggttattcaaaatgaccctctttctcaacggcca
ggtaagctgaccccctctcacttcccttgtaagtttgatattcgggaggtacagtactcc
cactttggggctcgcacgcctcctcaagatatggttaagctactgctacgttatgataca
gccgatgacaccataattgtgccatttactataaatgttcaggtactttttgatcagttg
gaagtcgttaccagaaacatgccgattacagtagacaaccttctgggagtaagcacgcct
attgataataaagcactgcagtttacgtatgacaagaacaaacaggattgtgaggtgatg
gttcttgaaagtgaggaactgccacgatatggggaggttgtaaatatctccaacagtgga
gtgaggcagaactgtgacagctttctgcaggcggatatccgctacagacatacgtcttat
tcctcgcctaatcaggattacattcccatggtggtaagagtgaccgattctaatggaaat
ttacttaaacacgaatacttccaagtgactgtgaggataaaagatggccagcccaatacc
cctcctcagccaagtttcagctctctgttgttaatggacgtaaatcagtttattatgaca
gctatcacccctcagatactctcagcgcaagattcagagactattccagagaaacttatc
ttcaatatcacgtctcccttaagctatggagagggtcagatcgtcagcactgatgatcag
aatgttcccatttcatctttttaccaaaaagacttggatgaccttaagatagcttataaa
cctcctgcatctgattctgacattaaaaggacttttggagtggagatggaagtaatagat
gctgaagggttgaattcagatccgtttagcttaatgattattgtccatcctaagaacact
ttggcgcctctagctacacgaaattctggacttatgctatttgaaggccagtccaggaag
cttcagagttcaaagaacctagaaatagctgatgaaaataatattgatgatgtcattgtg
tctgtaaaggatggcttgagacatggtcagctactgttgatgggtagcccagtgaaacag
ttctcacctgctgatcttgatgctggtttggtaacatatcaacatgacggtagtgatact
tatagtgataatataatctttaaactagatgatggtgttaaacaggtagaatttcttttc
cctatcactgtttatcctgaagacgatgaaccacctgtgctaaatgtgaacactggtgtg
accattcgtaaggaagaaatgaaaataaccccatttgttctgagtgccactgatgttgac
agtgatgaatttagaataaagtttgaattaaaaaatcctcgttcttcagaaggagaaata
ttcatgaaacagaccgaggcacctattgatccacaaaactggcaatttgtgaatggtagc
tacaagagagccatcacaacctggacacaacaggaccttttggaaggtcgcatattttac
agacgcactggtgaccacaaaactgagcccatcatagaccgcatcaaatttcgtgtatct
gatgataacatccctccgaatgaatctggagacaaagaatttgttatcaaaattatgccc
cttgataatatacctcctgagccatatttaggaactcctcttgaaatagtagtggacgaa
tttgaaaaaactgtcattacaaaaaagcatcttcgtttcacagatatggatactaaagac
agatacttgaagtacgtgatcacacgtaaaccatacaacactgacccaaacaatccatta
gatccaggaaagatagttttatccgaaactcctgaccaagaagtcactaactttactcaa
gctcaagttaatcaccataagatagcttacaagcccccatcagttgaactaggtatcatc
ccacgaattatacagtttgagtttcaagtggaagattcgataggaaacgttcttcctgga
caaactttcaccattaggctgaaacctgtggataacaagccaccggttatctacaataaa
ggactggaagtatttgaaaatggttttgtgacactcagtcttaatgttttagatgctgat
gatgtcgacacagaacctaactccattgtttttactgttaaacaagttcccaatcacggt
atcttgaattatggaattaaaaacctcagaaaaggtgctacattcacaaagaaagatatt
gctaatggacttgtgagttacattaataatggagctgagaaggatagtgataagattgaa
cttgaaatatcagatggcatacacaaagttcccataaccataaatatccaaattcgtcct
attgatgacgaagcacctgctctggagatagctccgggtacaattggtgcatctgtaaac
gtgaaggaaggtggcaaagcacccatcaccacgaaaattattaaagcttctgatccagac
acagaagacttgaaaataacatttcttattgactaccctccaagacagggcaggattgaa
ctgaatggagtcaacactgacagatttacccaaggtgatatggaaagcgagagagtgttt
tatatacataatggagctgaaataggagaaaccagcactgtagatacctttaatttatct
atatctgatatgtccaatgacctgctattgggaggtaataaaattgattatatccacgtc
aaagttaatattgaaccagtggacagtgtagcccctgttgtaactgtaaaaccaacacta
gtcgttcctgaagccaacaaggccactataaccctgtttcatttaaattctaccgataga
gacactaaggatgataatatagtttgcactattctagtgcagccattacatggatatgta
gaaaatatatctcctggtccaggttctgaaaggtctagagctggaatacctgtcactgcc
ttcaagatcgccgatataaaaagtggatttataaattatgttcagagtgtccataagggg
gtggaacctaccaatgacagattcacgttcagttgttcagatggaataaacttttctcct
agatctatttttccagttcagattgaaccaaccaatgacgaaatccctcagatatttatg
agagagtttgttgttgaagaaggcatgaaactaagtatcgacttgccaattcttaatgca
gacgatttggatgtcccaaagaatacgttaacattcagaattaagaataaaccaaagcat
ggcaaaatcgtggtccagttggccacaggagacgaaataattgatagttttaccctagac
caaatatcctatggctcaaacattatgtacgaacacgatgattctgaaactaaggaagat
gagtttgaattggaagtaagtgatgggttacataataccagtaaaaaggttaaggttatg
atttaccctgtcgatgatgaaactcctcgcttagcaatcaatgacggtttggaggtaggt
aaaggagagggtaagttagttacaaataggttacttaaagcagaggacatagacactgac
gacagcactataatgtttgtagttcgacaaccacctagacatggcgattttattttgttg
gatcccatttctcgattaccttacctcaacctaacgaagggaaccaactttacacagggc
gatattgatgaagaattaatcatgtatgttcacacaggaagggaaggtgtcagagatctg
attaaattcgatgttactgatggtcgcaacacttatgttgacagatacttctggatttcc
gtggaaggggtcgatctagtatatcctgatgttatcaataagggcgtggaacttccagaa
gggggacgggttacattgacaacagatgttcttagtactagcgatctcaacagtgatgat
gaatacctaagtttcatcataaccagggatccaaccagagggcatctggagtctaccgac
aatccaggtattccagtgacgttattcactcaaatggatctcgctggaaacaagatctac
tatgtccacactgatggtgaagagaccaagatggacagttttgaatttgaggttacagat
ggctacaactctgtgtttcgaacgttcaggatctcaattagcgatgtggacaacaagaaa
ccaattgtgtttatcaacaaactgcgaatactcgagagcggtgaaggacttattactcca
tttgagttgaaagtagaggacagagacacggatgataaaaagttaaaacttactataact
caagtcccagttcatgggaagatattatataacaatctctaccctattacagtattcacc
atggaagatttacgagaaaataggattagttatcaccacgatggtagcgaaagtaaagaa
gacaatttttctttcaccttaacggatggcactcacgtggggttttatgtgtacccagac
acagcgaaagaaacccgaaggccacagacagttgaaatagaaatcgtaccagttgataac
aatgtgccccaagttgtgttaaataggggcgcttcggctatcgggccactacacaatggt
caactcgggtaccgctttactaacaaagttcttcgagcagaagactcggatagccaggaa
attgttatacaatacattattactgtgccaccaaaacatggggttattatcaacaaggcc
ttagggaacgaaagtatttccaacttcactcaaggcgacatcaatgggatggtcatttac
tacatccttgacgacctggagaacgccacgagtgacatcttccatttcaaagttgttgat
gcaggtgcaaacgaattaccgggtcaggattttcgactaaactgggcctggatatctctg
gaatacgatacatacgaagtaaatgaaacgaaaaagtacttgaaagttaagctgtttcga
agaggctatttaggcgaaacgtcgtttattggtattaagacgaaaaacattacagcgaag
cagggcgaagattttggtaagcattatgctgaacaagtccagttcagtcctggacagacg
gaagcttattggaaacttcgaatcacagacgacagcttatttgagaatggcgaagagttt
gagatcttgttagaggagccagtcatggctgccactgaatatcccgataaggccgtagta
actattttggatgacgaagacgtttcgacagtggagtttcctgaaccagaatacgaggta
aaggaaaatgttggagaaatcctagtgcctgtcgaaagaaaaggtgatcttagcaaggag
atgatggtggtctgttccaccgaagcaggttctgcaacagggacgattccagcatctgtc
cagtcgttctcagacttcatcagtcgtcctgagagtcacaaaagtgtcatcagatttaac
caaggagaagaactcaaatactgccgtttagtgataattgatgattcactgtatgaagat
gatgagtccttcaaaatcagactctcccaaccgttggggggcaaagtgggggtacagaat
gtaacaaaagtcataattgctcccgataaacacgacgtcccattcttctatttcggcgag
cctgaatattacgtagatgaaagcgacggttatgttgaggtaaaagtttggaggaccgga
actgacctcagcaaacctgcaagtgtcacagtccgctcaaaaccttccgacccgccatct
gcagaggctggaaacgattacgttgggaccgggaaaacgttgaatttcccacctggcgca
actctggagaccttcagaataaccatcttggatgatctgggtcaaccagttttggaagga
ccggaaacttttgagctggttctgcgtatgccgatgaatgctgagttgggcaagcctagt
catgctgtggtgaccattaacgattctctttctgacttaccatccatgcagttccgggat
acagaatatacagctttagaaaatgatggtgaagttacggcgtacattattcgaagcggt
gacctaggacaagtgtccactgtccactgttacacccgccaagataccgcgaaagtcaca
gaagactatgtagaaagaccgaatactaacgagtctctcgttatttttgagccaggtgac
agggaaaaaccatgcacagtgatcttggttaatgatagtattcacgagcaagaagaaata
ttccgattgaggcttggatctccctcaagtgaaacggcaggtggcgctttggtcggtccc
aaaaatgtgactaaaattacaataaaagataaaggagacaaacccgtaataaaattcgaa
aaaaatcgatataatgtaaaagaacctcggcatcctgatgacattgcagtagtggaagta
ccggtaattcgaaggggtgatctaagcaaaacgtctcacgtgcgagtacacactaaagat
ggttcagccaagtctggaaaagattacgttccattttccagggaactggaattcggacaa
aatgtaagccgaataatcgtagaaatcgaaattctgtacgatgaggagaaggagcatcgt
gaggctttaactctccatctccgtccagatagagatatgattgctgatatagaggacagc
aaagtgattatttatattcaagaagttaatattgttgctgacgtcaccttcccattcgaa
ccaatggtcgtttcgctgaaagattacgatgatgcagccagtgcatcatccagtcctatc
ccagggtatccagtagtgtgtattacgtcgtgtaaccctaaacatccagactctgataga
acaggtactctctgcagctcggaaggtatcaacgacaatttgacagagtttcgttggcgt
gtggcagcccctagcggtcacgacggtgtaacaagcgagctgaggaacatagaatcaaga
acctttttcactggcacacacgatattactctggatagtatttactttgcaccaggaagt
cgcgtgcaatgcgctgcacgagctgttaaccaagacggggatccagggctggagttggag
agcaaaactgtggttatatcctattctaatgggttgtgttcacctcgtattgagggatcc
accggtgcagaaccatttactgctaagatgaggtatacaggtccagatgatcaggattac
cccaacttgataaaactgaccgtggtcattccacaccgtgatgggatgctaccagctatc
tcgacgcaaccattgtccaacttcgaactgacgttgagcccagatagtctgagagttggt
acacataagtgttctaatctaatagattaccaagaagttcgcaccaagcatgggtttctc
accaacgatacgaagaatcctaatgttatcggtgaagttgagccttaccagtatagttca
gatctgaggacagaccctacactcaggttctataggaacttggacttggaagcttgcatg
tgggagttcacagcgtattatgatatgtcagaactagtgaccgactgtggaggaacgatc
accagtgatggacaggttttaaacctcgtccagtctttcgtgtctgttcgtgttccattg
tatgtttcgtatattttccattctcctgttgctactggcggatggcaacacaatgatctt
atatcacacatgcgactcactttcgtctacgacaccgccatcttgtggaagaacggaata
ggagctccagaggagtctcagcttcagggtaatctctaccctactggcatgagaatacga
gaagatggacgactagttgtaaactttagaacagaacctcggttcaaaggccggtttgta
cttagtcatccaggaagtggtcttacgtccatggtgatgtcacaggatcaaccggaactg
acgtttactttggaattaattcgtagtgagccaacttacgcccagcctgaacagcaatgg
gagttcgtctcagatctagcagttcgagattattctggaaactatcacgttaagttgatt
ccgtgcactgccacggacactatggaatactcccactctttggaatgtaatcctcgagac
ccaatcgtatttgacctccagattcgatttcagcaggtcagtgacccagtgccagcagaa
ttcagcttgaacacccatttccacctgatgcggaagaaagccctctggctctcagatggg
tccatgggattcggagaagattcggacgtttcttttgtaccaggagacacggtttatgga
cgcataatggtagatcctgtccaaaatctaggagagtctttttacatgaccatcgagaag
tgcttcctatgtacaggagaagatggttacgtacccaagtacaaccctgataactacgag
tacggatgtatggctgaatctcctaacttgctgcacactttcaaaatcattgatagagga
gctcccaacacagtaaaaaattatttcagaaacgtgtctttcaacgctgtgctggctgtt
gatgatgtggaaccggaagttgcgaatctgaaaaatcagccgggtgctgatggtttccgt
tttgattctgcgccactttttcaagtgtcgtctgggacacagtggtttgttcactgtatc
tacactgttcgttcagagaaaaatgctgctaggggaataggaaaacggagtattccgtat
catagtttacaaaatgctggtgctgccctctcacggcgcaagcgggcgtccaaagatgta
gatggagttggtaaagatgggcttggaaccaacatgaatcgtattgttctacagttctca
cgagactccgggacaacagcagaggaggaggaagcatcaggtgactctggtgtattccaa
gatggtgccaataaagaaaacaacgaaactggtcttccgcttattccagtaattgctggt
atcgtctgttctctgatagtcgtcattatcgttgccgtcgttcttgtccgaagaaaatgg
aattcagaaaataaatttccgccttcccatgcagccactgtcgtagcttcgaatggacag
actcggctcgtagttccatcttataacatcaccgatggagacaacactgaggtgtaa
DBGET
integrated database retrieval system
