Limulus polyphemus (Atlantic horseshoe crab): 106462459
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Entry
106462459 CDS
T08968
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106462459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpol03400
]
106462459
DNA repair and recombination proteins [BR:
lpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106462459
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
106462459
NCBI-ProteinID:
XP_022245437
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MSHIENEEGKPEQQQAFISFYLSMPQQPSTTFRFFDRNDFYTLHGSDAVFVAKEFFKSMS
VVKYYCSGSRKLETVSLSKLNFESFVRDLLLFHHYRVELYKSQTGSRNNSSWVLDSKASP
GNLTEMEGLLFGNMELVEARGVISIKLSTETKLIVVGIAFGDTILRKLIITDFSDNDHFS
NLQAVLVHLSPRECLLMKDNSPQQTRLRLVIERSGISITDCKSADFACKDIAQDLQRLLK
FKSGETAHSVLPNEVDHKQSAGALASVIKYLELLSDETNFGQYHLLTFDLTQYVRLDGAA
VRALGILPSTNDGSKSHSLLGLLNKCRTSPGQRLLGQWIKQPLINIHKIEERLNIVETFV
NNTELRQALHEDHLRKIPDLQRLARKLQQKKATLQDCYKIYLFLNHLPAIQNQLESQEGK
CMAVFRELYCCPFKDFEEDFVKFREMVETTLDMFMVENGEFFVRPDFDQDLKELYDQMNE
LEEQIQKTLPKVCIPFNFSISIIITLGETIFDDHVIYDLSHSHVAWSCVPQPHSYREEKA
LRNRKDFFTIDTKQNGVRFHNSLLRQLNAKYVAIRLDYEKQQKNVVDMIMDIAAGYSEPL
LQMSDVIAHLDVLVAFSVLAVSAPVPYVRPQLLPKGSGIISLKQARHPCMELQENVSFIP
NDVNFEQGKSIFHIITGPNMSGKSTYIRSVALNILMAQIGCFVPSEEARISVVDAVLARV
GAEDRQLKGVSTFMAEMLETSSILKSVTSDSLIIIDELGRGTSTYDGFGLAWSVSEHVAT
KVGCYCLFATHFHELTALSGEVQGVNNLQVTALTSDDTLTMLYKVIPGVCDQSFGIQVAA
LAHFPNHVIEFAKKKVKEFEIFSIDSSEMKGKEDMEPHLKKQKILKEADEIMHNFVEAAQ
KTCSGSNCLSAFEELKNEIQNNNNIVIKKIISGEQD
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagccatatagaaaacgaagaaggaaaacccgaacagcagcaagctttcatttcattt
tatttatcaatgccacagcaaccatctacaacctttcgtttttttgacagaaatgatttt
tatactttacatggatctgatgcagtgtttgttgccaaggaatttttcaaatctatgtct
gtagtcaagtattactgttctgggtctagaaaactagaaactgtctctctcagcaaattg
aattttgagtcatttgtgcgagacctgctgttatttcatcattatagagtggaattatac
aaatcacagacaggaagcaggaacaatagctcttgggtgttggatagtaaggcatcacca
ggaaatttgactgaaatggaaggtcttttgtttggaaacatggaacttgtagaagccaga
ggagttatttccattaaactgagtacagaaaccaaactaattgttgtaggcattgccttt
ggtgatacaattttgagaaagctgattattacagatttttctgacaatgaccacttctcc
aatcttcaggcagttcttgtgcatctaagcccaagagagtgtttactaatgaaagacaac
agtccccaacagactcggttaagattagtgattgaaagaagtggaatttctattacagat
tgtaaatcagctgattttgcatgcaaagatattgctcaggatttgcagcgattgctgaag
tttaagtctggagaaactgcacacagtgttttaccaaatgaggttgaccataaacagtct
gctggagccttggcttcagttattaaatatctagaacttttatcagatgaaacaaatttt
ggacagtatcatctcttgacctttgacttaactcagtatgtacgtttggatggagcagca
gtaagagctctaggcatattaccctctactaatgatggcagcaagtctcatagtttactg
ggtctacttaacaaatgtcgtacttcaccaggacaaaggcttttaggacagtggattaaa
caacccttaattaatatccacaagattgaggagcgattaaacattgtggaaacatttgtc
aataacactgaactacgtcaggcactacatgaagatcaccttcgtaaaattccagatctt
caacgacttgcaagaaagctgcagcaaaaaaaggcaaccctacaggattgctacaagatc
tatctctttcttaatcatcttccggctattcaaaatcagcttgagagtcaagaaggaaaa
tgtatggcagtattcagagaattgtactgttgccctttcaaggattttgaagaagatttt
gtaaagttcagagagatggtggaaacaacattagacatgttcatggttgagaatggggaa
tttttcgttcgtccagattttgatcaggacctaaaagaactttatgatcaaatgaatgaa
ctagaagaacaaatacagaaaactttgcctaaggtatgtatcccttttaacttttctatt
tctatcataatcacacttggagaaaccatttttgatgaccatgtgatatatgatttatcc
cacagtcatgttgcatggagttgtgtaccacaaccacattcctatcgtgaagagaaagcc
cttcgaaatagaaaagatttcttcaccattgataccaaacaaaatggagttcgttttcat
aattcattactccgtcagttgaatgcaaagtatgtggctatacgtttagactatgaaaag
caacaaaagaatgtagttgatatgatcatggatattgctgctggatacagtgaaccactt
ctacagatgagtgacgtgattgcacatcttgatgtgttagtggctttctctgttttagct
gtcagtgctcctgtaccttatgttcgaccccagctacttccaaaaggttcaggaattatt
agtttaaaacaagctcgtcatccttgtatggagttgcaagaaaatgtttctttcattcca
aatgatgtaaactttgaacaaggcaaaagtatctttcatattattacgggtcccaacatg
agtggaaagtcaacttatattcgctcagtggctctgaacattctgatggcacagataggc
tgttttgttcccagtgaagaagcacgtatatcagtggtagatgcagtcttggctagagtt
ggtgcagaagacaggcagttaaaaggagtttcaactttcatggcagagatgttggaaact
tcctcaattttaaaatctgttacctccgattctcttattatcattgatgagttaggaagg
gggacatccacatatgatggatttggtttggcttggtctgtttcagaacatgttgctacc
aaagttggctgttactgcttgtttgccacacactttcatgagttgacagctctctctggt
gaggtccaaggagtaaacaacttgcaagttacagctttgacatctgatgatacattgact
atgctttataaagtaataccaggagtttgtgaccaaagttttggaatccaggtagctgca
cttgctcacttcccaaatcatgtcatagagtttgccaaaaaaaaggtcaaagaatttgaa
attttcagtattgacagttcagaaatgaagggcaaggaggacatggaacctcatttaaag
aaacaaaagatattaaaggaagcagatgaaattatgcataactttgttgaggcagcacag
aaaacttgcagtggcagtaactgtttgtcagcttttgaggaattgaagaatgagattcaa
aacaataacaacattgtaataaaaaaaattatttcaggtgaacaagattaa
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