Limulus polyphemus (Atlantic horseshoe crab): 106462619
Help
Entry
106462619 CDS
T08968
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106462619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpol03021
]
106462619
03041 Spliceosome [BR:
lpol03041
]
106462619
03036 Chromosome and associated proteins [BR:
lpol03036
]
106462619
Transcription machinery [BR:
lpol03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106462619
Spliceosome [BR:
lpol03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106462619
Complex B
106462619
Complex C
U2 SnRNP specific factors
106462619
Chromosome and associated proteins [BR:
lpol03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106462619
TFTC complex
106462619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
106462619
NCBI-ProteinID:
XP_013778015
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MFLYNLTLQRATGITHAVHGNFSGTKQQEIAVSRGKILELLRPDPNTGKVHTLLTVEIFG
VIRSIMGFRLTGGSKDFLLLGSESGLSLFISSMFLFIKTXKVHQETFGKSGCRRIVPGHY
LSIDPKGRAVMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLVCHMVGVDVGFENP
MFACLEMDYEEADNDPTGEAAQTTHQTLSFYELDLGLNHVVRKYSEPLEEHGNFLISVPG
GADGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKTTLETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRQLKNLVLVDELESLSPIMHCQIADLANEDT
PQLYTACGRSSRSSLRVLRHGLEVSEMAVSELPGNPNAVWTIKKKSDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCAQIGDDALVQIYPDGIRHIRADKRVNEWRTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTDRKEMSADVICMALAGVPAGEQ
RSRFLAVGLADNTVRVISLDPSDCLSPLSLQALPDTPESLSIVEMGGSEGGGESLQGMLY
LNIGLQNGVLLRTVLDQVTGDLSDTRTRYLGSKPVKLFKVRMQGTDAVLAMSSRSWLSYY
YQNRFHLTPLSYETLEYASGFSSEQCPEGIVAISTNFLRILALEKLGAVFNQVSTPLEYT
PRKFVIHPDTGYLILIETDHNAYTEKTKQERKQQMSQEMIEAAGDDEQDLANEMAAAFLN
ENLPETTFSAPKAGPGMWASVIRIIDPIEGKTIDKVSLEQNDAAFSICLTKFANHGDELF
LLVGIAKDFQLNPRQSNGGSIHVYKFVDEGRQLELVHATPVDEVPGAICPFQGRVLVGVG
RVLRIYDLGKKKMLRKCENKYIPNFIVTIHAMGNRVIVGDTQDSFQFLRYKRQENQLIVF
ADDTNPRWVTTATLLDYDTIAGADKFGNMVMIRLPPVISDEVDEDPTGVKALWDRGWLGG
SSQKAETIASFHIGEVILSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHL
EMHMRSENPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSLEPSKQKSIAEDLDRNPSEV
SKKLEDIRTRYAF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgttcttatataatctaaccctacagagggccacaggaattactcatgctgttcatgga
aatttctcgggaactaaacagcaagaaattgcagtttcccgaggaaaaattcttgaactg
cttaggccagatcccaacacaggaaaagttcataccttacttacagttgaaatatttggg
gtgattcgttctataatgggttttaggctcacaggtggatcaaaagacttcctactctta
ggctctgaaagtggcttgagtttgtttattagcagcatgtttttatttattaaaacttaa
aaggttcaccaagaaacatttggaaaaagtggatgtagaaggattgtaccaggacattat
ctgtctattgatccaaaaggacgagctgtcatgattggtgctgtagagaaacagaagctt
gtgtacatccttaaccgtgatgctgctgctcgattgacaatttcatctccccttgaagcc
cacaaatctaatacacttgtctgtcacatggttggagtggatgttggttttgaaaatcca
atgtttgcttgtttagaaatggattatgaagaagcagacaatgatcctacaggtgaagca
gcccaaacaactcatcaaacactgtctttttatgaattagatctgggactgaaccatgtt
gtgagaaaatacagtgaacctttagaagaacatggaaattttctaatatcagttcctggt
ggagcagatggacctagtggtgttctcatatgttctgaaaactacatcacctacaaaaac
tttggagaccagccagatattcgttgtcctatcccgagaagaaggaatgacttggatgat
ccagagagagggatgatttttgtttgtagtgcaactcataaaactaaatcgatgttcttc
ttcttagctcaaacagagcaaggtgacatcttcaaaactacactggaaactgatgaagac
atggtaacagaaatcaagcttaagtattttgacactgttcctgtagcaactgcaatgtgt
gttctgaagacaggatttctatttgtggcttctgagtttggaaatcactacttgtaccag
attgcacatttaggtgatgatgatgatgaaccagagtttagtagtgcaatgccactggaa
gaaggagatacatttttctttgctcctcgtcaactaaagaatctagttttggttgatgaa
ttagaaagtctatctcccatcatgcattgccagattgcagatttagctaatgaagatacc
cctcagttatatacggcctgtggtcgaagttcacgatcttcactacgagttttgagacat
ggtttggaagtgtcagagatggctgtgtctgaactaccaggtaaccccaatgctgtatgg
actataaaaaagaagtcagatgatgaatttgatgcctacattattgtatctttcgtcaat
gccacccttgtattatctattggtgaaacggtagaagaagtgacagattctgggtttctt
ggtaccaccccaaccttgtcctgtgctcagattggagatgatgctttagttcaaatctac
ccagatggcatacgtcacattcgagcagataaacgtgtgaatgaatggcgtacaccaggg
aagaaaaccattgttaaatgtgcagtaaaccagagacaagttgttatagctcttactgga
ggtgaacttgtttactttgaaatggatccaacaggacagttaaatgaatacacagataga
aaagaaatgtcagctgatgtgatctgtatggcacttgcaggagtaccggcaggagaacaa
cgttcaaggtttctggctgttggcttagctgataatactgttagggtgatttcacttgat
ccttctgactgcttgtcccctctgagtcttcaggccctgcctgatacaccagaatcgctg
tccatagtagagatgggtgggtctgagggtggaggagaatcactgcagggaatgttgtat
ttgaatattggactacagaatggtgtacttttgcgaacagtccttgaccaagtaacagga
gatttgtcagacactcgaactcgctacttgggctctaaaccagtgaagctttttaaagtt
agaatgcaaggcactgatgcagttttagctatgtctagtcgatcgtggttgagttattat
taccaaaatcgtttccatcttactcctttatcttatgaaacgttggagtatgcttctgga
ttttcttcagaacagtgtcctgaaggaattgtagccatctctacaaatttcttgaggatc
ttggctttagagaagttaggagctgtctttaaccaagtctcaacacctttggagtataca
cccagaaaatttgttattcatccagatactggatatctgattctcattgaaactgaccat
aatgcttatacagaaaaaaccaaacaggaaagaaaacaacagatgtcccaggaaatgatt
gaagcagctggggacgatgaacaggacttggccaatgaaatggctgcagcttttttgaat
gaaaatcttccagaaacaacatttagtgccccaaaagctggtccagggatgtgggcctct
gtgattcgaatcatagacccgattgaaggcaagaccattgataaagtttctttagaacag
aatgatgcagcatttagcatttgtttgacgaagtttgctaaccatggagatgagttattt
ttgctggtgggaattgctaaagatttccagttaaatcctcgacagtccaatggtggtagt
atccacgtgtataaatttgtagatgaagggcgacaactggaacttgttcatgcgacacct
gtggatgaagttccaggagccatatgcccctttcaaggtcgtgtccttgttggtgttggt
cgagtgcttcgtatttatgacttggggaagaagaagatgttgagaaagtgtgaaaacaag
tatattcccaacttcattgtcactattcatgccatgggaaatcgtgtgattgtaggagat
acccaggatagctttcagtttttgcgatacaagcgtcaggaaaatcagttgattgtgttt
gccgatgacaccaacccacgctgggtgacgactgcaacactacttgactatgataccatt
gctggtgctgataagtttggaaatatggtcatgattagacttccacctgttatcagtgat
gaagtagatgaagatccaacaggagtgaaggccttgtgggaccgaggctggttgggaggt
tcttcacaaaaggcagaaacaatagccagctttcacataggtgaagtgattttatcactc
cagaaggccactctcatccctggaggctcagagtccttggtgtacacaaccctctctgga
acagtgggggtccttgttccattcacttcgcatgaggaccacgattttttccaacattta
gagatgcacatgcgctcggaaaatcctccattgtgtggccgtgatcacctgtccttcaga
tcgtactatttccctgtcaagaatgtgattgatggagacctgtgtgaacagttcaactct
ttggaacctagtaaacaaaagagcattgctgaagatctggatcgaaatccaagtgaggtc
tccaagaagttggaagacatcagaacaagatatgctttctaa
DBGET
integrated database retrieval system
