Limulus polyphemus (Atlantic horseshoe crab): 106462644
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Entry
106462644 CDS
T08968
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106462644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106462644
Spliceosome [BR:
lpol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106462644
Complex C
U5 SnRNP specific factors
106462644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_2
TPR_16
Suf
HAT_Syf1_CNRKL1_N
TPR_17
TPR_8
HAT_PRP39_C
FAT
ARM_TT21_2nd
T7SS_EccA1_N
TPR_21
fn2
Motif
Other DBs
NCBI-GeneID:
106462644
NCBI-ProteinID:
XP_022245664
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MATIAPNALVSKRKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDASDVPDDRHAPA
NKRKKKDEDEDDDEDLNDSNYDEFAGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK
EYREAKLKRELERYRQERPKIQQQFNDLKRDLASVTESDWKTIPEVGDARNKRQRNPRPE
KFTPMPDSILTKAALGGDSVTTVDPRQQAYSVGLATPFPGTTTPGGLMTPGWATPSGDLD
LRKIGQARNTLMDIKLNQVSDSVSGQTVVDPKGYLTDLQSMIPTHGADISDIKKARLLLN
SVRETNPNHPPAWIASARLEEVTGKIQAARNLITKGCEMCPNSEDVWLEAARLQPNDLSK
AVIAQAVRHMPSSVRIWIKAADLETEIKGKRRVYRKALEHIPNSVRLWKAAVELEEPEDA
RILLSRAVECCSTSVELWLALSRLETYDNARKVLNKARENIPTDRQIWITAAKLEEANKN
MHMVEKIIDRAISSLRANGVEINREQWFKDAIECEKSGSVLTCQAIIKTVIGIGVEDEDR
KHTWMEDADMVLKPWFSYFAKFYGNETQPKFCLQSFHGFMLLYSIFLFLIQGDVPAARSI
LSLAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVMMKSVKLEWALGD
LIQAKSLLEEGLKLYPEFPKLWMMKGQILEQEQKPEAARDAFNQGVSSVTETHHPLTVKL
HHPLESLETLLQRAVAHCPKAEVLWLMGAKSKWLAKLETKPLCSRIKPIFVILTTAMQEC
PGSGILWAEAIFMEARPQRKTKSVDALKRCEHDSHVLLAVSKLFWSERKTTKAREWFTRT
VKIDPDLGDAWAYFFKFEMLHGTEEQQDEVRKGCVNAEPHHGEHWCSVSKDIQNWRKKTV
EILVLAANAVLIPV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaattgcaccaaatgcattagtcagtaaaagaaagaaacattttctcggtgtt
ccagctcctctgggttatgttgctggtgttggaagaggtgctactggattcaccactcgg
tcagatatcggtcctgcccgtgatgcaagtgatgtacctgacgatcgccacgcaccagca
aataaacggaaaaagaaagatgaagatgaggatgatgatgaagacttgaatgattctaat
tatgatgagtttgctggttatggaggaagtttgttcagtaaagacccttatgacaaagat
gatgaagaagcagatgctatttatgaagccattgacaagcggatggatgaaaaaagaaaa
gaatacagggaggccaaacttaaaagagagctagaaagatatcgacaggagcgtccaaaa
atccaacagcagtttaatgatttaaagagagacttggctagtgtaactgaaagtgattgg
aagaccatccccgaggttggtgatgctcgtaataagagacaacggaatcctcgtccagaa
aagttcactcctatgccagactccattttaacaaaagcagcattgggaggagattctgtc
acaacagtagaccctcgtcaacaggcctatagtgttggactagctactccttttcccggt
acaacaacaccaggtggcttaatgacaccaggatgggccacaccaagtggtgacctggac
ttgagaaagattggacaagcaaggaacactcttatggacattaaactgaaccaggtttct
gattcagtgagtggccagactgtagttgatcctaaaggttatttgacagacttacagtcc
atgattccaacacatggagctgacattagtgacatcaagaaagctaggcttctgctgaat
tctgtgagagagaccaatcctaaccaccctcctgcttggatagcctcagctcgattggag
gaagtgacaggaaagatacaggctgcaagaaacctcatcactaagggctgcgagatgtgt
cccaactcggaagacgtttggcttgaagcagcacgtcttcagcctaacgatttgtctaaa
gctgttatagcccaagctgtacgccacatgccatcatctgtaagaatatggatcaaagca
gcagacttagaaacagaaattaaaggaaaacgacgggtttatagaaaagcattggaacat
attccaaactctgtgaggttatggaaggcagcagttgaattggaagaacctgaagatgct
cggatcctcctaagcagagcagtggaatgctgttcaactagtgttgagctatggttagct
ttgtctcgacttgaaacatatgacaatgcaagaaaggttttgaacaaagctcgagaaaat
atacccactgaccgtcagatctggatcacagctgctaaactggaagaagcgaacaaaaat
atgcatatggtggagaagattatagacagagctatcagctctttaagagcaaatggagta
gaaatcaatcgagagcagtggtttaaggatgccatagagtgtgagaagtcagggtctgtg
ctgacctgtcaggccattattaaaacggtcattggtattggagtagaagatgaggatcgc
aaacacacgtggatggaggatgctgatatggtactgaaaccgtggttttcatattttgct
aagttttacgggaatgaaactcaaccaaagttttgcttgcaatcatttcatggttttatg
ttattatattcaatttttttatttttaatacagggtgatgttcccgcagcaagaagtatc
ctgtctctagcttttcaggctaaccctaacagtgaagaaatctggttggctgctgtgaag
ctagaaagtgaaaacaacgagtatgaaagagcccgccgtttattggcaaaggcccgttct
agtgccccgacagccagggtgatgatgaagtctgtgaagttggagtgggctctaggtgat
ctaatccaggcaaaatcacttctagaagaaggcttgaagctttatccagagttccccaag
ttgtggatgatgaaaggacagattcttgaacaagaacaaaaacctgaagctgcaagagat
gctttcaaccaaggagtaagtagcgtaactgaaacacatcaccctctaacagttaaacta
catcatcctttggaatcgttggaaacacttttgcagagagcagtggctcattgtcctaag
gcagaagttttgtggttgatgggagcaaaatccaagtggttagcaaaattagaaactaaa
cctttgtgctctcgaataaaaccaatttttgttatcttgaccacagctatgcaggaatgt
ccaggaagtggaattctttgggcagaagccatcttcatggaggcaagaccacagaggaag
accaagagtgtggatgcattgaaacgctgtgaacatgattcgcatgtattgctagctgtg
tccaaactgttttggtcagaaagaaagacaacaaaagcaagggagtggtttactcgtaca
gtaaagatcgatcctgaccttggagatgcctgggcctattttttcaagtttgaaatgtta
catggtactgaggagcaacaagacgaggttaggaagggctgtgttaatgctgagccacac
catggagagcactggtgttctgtatcaaaggacatccaaaactggaggaagaagacagtg
gaaattcttgttctcgcagccaatgctgtgcttatcccggtatga
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