Limulus polyphemus (Atlantic horseshoe crab): 106462649
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Entry
106462649 CDS
T08968
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03015
mRNA surveillance pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106462649
09123 Folding, sorting and degradation
03018 RNA degradation
106462649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106462649
03041 Spliceosome [BR:
lpol03041
]
106462649
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106462649
mRNA cycle factors
Stress granule specific factors
106462649
Spliceosome [BR:
lpol03041
]
Complex C
Other components
Complex C specific factors
106462649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_occluded
RRM_5
RBD_RDR6
Nup35_RRM_2
RRM_Nup35
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
106462649
NCBI-ProteinID:
XP_013778045
UniProt:
A0ABM1BAD8
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MNPSGPNYPMASLYVGDLHPDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPSDAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGLGNVFIKNLDKSIDNKAMYDTFS
AFGNILSCKVATDEEGNSKGYGFVHFETEEAANNAIQKVNGMLLNGKKVFVGKFIPHNER
EKQMGEKARRFTNVYVKNFGDDLDDEKLREFFEKYGKITSAKVMSDNEGKSRGFGFVSFE
DPESAERAVDDMNTKEMNGRLLHVGRAQKKTERQAELKRKFEQLKIERITRYQGVNLYVK
NLDDVIDDARLRNEFAPYGTITSAKVMTDSNGRSKGFGFVCFSSPEEATKAVTEMNGRIV
VSKPLYVALAQRKEDRKAHLASQYMQRMAGMRMQLGQMFQPGGAGYFVPTMHQAQRGYFP
AQMPQMRGTPRWPGQPAIRHGGQPSAAFQGVHSVPFPRQSRPPGGAQPAIRSGMSARPIT
GQQGTAPGRVAGMHPSGVPGAGPATIPGANVNHPRPATFKYTANIRNPHQPVPVGQPTVQ
QVPQQAVHIQGQEPLTASMLAEANPQEQKQMLGERLFPLIHRMYPELAGKITGMLLEIDN
TELLHMLEHHESLKAKVEEAVAVLKAHQAKEALAAVAVVGVKKE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaagtggcccaaattatccaatggcttctctatatgttggagatcttcatcct
gacattactgaagctatgctttttgagaagttttcttctgctggaccagttttgtcaatt
agagtatgcagagatatgatcactagaagatcgctaggatatgcctatgtaaattttcag
caacctagtgatgcagaacgtgccctggacacgatgaactttgacacaattaagggtcga
ccaatcagaatcatgtggtctcaacgagatccttctctacgaaagtctggcttaggaaat
gtcttcattaaaaatttggacaaaagtattgacaataaagccatgtatgacaccttctca
gcatttggtaacatcctgtcctgtaaggtagctacagatgaagaaggaaactccaaaggt
tatggatttgtacattttgagactgaagaagctgctaataatgccattcagaaagttaat
ggcatgttgcttaatggaaagaaagtgtttgtaggaaaatttataccacacaatgaacgg
gaaaagcaaatgggtgaaaaggctcgtaggttcacaaatgtctatgtgaaaaactttgga
gatgacctggatgatgaaaagctgagagagttttttgagaagtacgggaagatcacgagt
gcaaaggtaatgtcagacaatgaaggaaaatcaagaggctttggttttgtaagttttgaa
gatccagagagtgctgaaagggcagttgatgatatgaataccaaggaaatgaacggcagg
cttcttcatgtgggacgagctcaaaagaaaacggagcgtcaggcagaactaaagcgaaag
tttgagcagctcaagattgaacgtattacacgatatcagggtgtcaatctgtacgtgaaa
aaccttgatgatgtgattgatgatgctcggttaaggaatgagtttgctccatatggaaca
atcacgagtgcaaaggtcatgacagacagcaatggtcgctccaaaggttttggatttgtg
tgcttcagttcaccagaggaagctacaaaagctgtgactgaaatgaatggtcgtattgtc
gtttccaagcccctgtatgtggcattagctcagagaaaggaggaccgcaaggctcacttg
gcctcgcaatacatgcagagaatggctggcatgcgaatgcagcttgggcagatgttccaa
ccaggaggagcaggatattttgtacctaccatgcatcaggctcagcgtggctacttcccc
gctcagatgcctcaaatgcgaggcactcctcgctggccaggccaaccagcaatccgccac
ggtggtcagccaagtgcagcattccagggagttcactctgttcccttccctcgacagtca
agacctccgggaggagcacaacctgcaatacgaagtggaatgagtgcccggccaattaca
ggtcagcagggaacagccccgggtcgagtagcaggaatgcatccatctggtgtacctgga
gctggtccagcaaccatcccaggggctaatgtgaaccaccctcgacccgctaccttcaaa
tacacagccaacatccgtaacccccatcaaccagtgcctgtaggtcagccaactgtccag
caggtaccgcagcaagctgtacacattcaaggacaggaaccactgactgcttctatgttg
gcagaggctaaccctcaggaacagaaacagatgctaggagaacgtcttttcccacttatt
catcgtatgtacccagaattggctggcaagatcactggcatgctgcttgagattgacaac
actgaattactgcacatgttggaacaccatgaatctctgaaagctaaagtggaagaagct
gtggctgttctaaaggctcatcaggccaaagaagccttggctgcagtagctgtagttgga
gttaagaaggaatag
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integrated database retrieval system
