Limulus polyphemus (Atlantic horseshoe crab): 106462664
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Entry
106462664 CDS
T08968
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03013
Nucleocytoplasmic transport
lpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106462664
03015 mRNA surveillance pathway
106462664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106462664
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106462664
mRNA cycle factors
P-body specific factors
106462664
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
106462664
NCBI-ProteinID:
XP_013778062
UniProt:
A0ABM1BAE7
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MDDQEVFNNVTCESKGGDIEKKPEVRGKSWKREREERGRRQQNQQQQQQDDSSNCETETE
SSDKFALEEPVILAEEKRGWGDGWKKLEDSVEHNSSSQDIEEGDELKEQQMLQETETDAG
GEEESKQHLEAFIIETVERLRRKAELRTANSNIAANRPEDSFFSKLDSSLKKNTAFVKRL
KNLTEAQRDSLIKDMNGLNLTKYISEAAAAIVEAKLKMSDLNTAVKICSLLHQRYSEFST
QLLENWQKVLPMKKDEKITNPSKIRVDLRFYSELISCGVFTLKEGLPLLGNLLTILTATD
KEEHNNINILLSFCKHCGEDYAGLVPQKMRNLAQKHGLEIPKSDLLPPDRQKGLRNLLKD
YYRSLCRHVVKDQKTLHNMEQHNRRILQTKGELSTERKEKFEAAQVAFQKLLSSTQQFSD
IIDEDLPELPREDVSSQDPDVANLDVHNRFKDGEFEGTTSLWEDDDTRSFYENIPDLKAF
IPGILFKDSAQAPILKSQLEPMDAGLEEELSKLELDEVEALELEEEKLEDSDTKSETSSK
QDEKDLTETILQDVDESDENSGIVATNKMILDGFLFSLLNCVNREMIDQAAVDFCMNLNT
KPNRKKLVRTLFLVPRTRLDLLPFYARFVATLNPCMPDVSNDLVTLLKQDFKFHIKKKDQ
INIESKVKTVRFIGELTKFNIYPKSESLYCLKMLLFDFTHHHIEMACNLLETCGRFLFRS
PDSHQRTKVYLSQMMRKKSVMAIDSRYATMVENAFYYCNPPEAPITVKVERLPIQEYLRK
LLYKDLSKNNTEKILRQMRKLNWDDPDISAYATKCLMSIWNVKYYNVRCVANLLAGLVAY
QENVGPQVVDGVLEDIRLGMEVNPELFLILYSYSDSYSELDSPDNLFRIRLVCILLETCG
QYFNSGSSKKKLDCFLVFFQRYYWHKKSSDIFSEEHPFPVTLEFLVKDTIQVLRPKFKLA
DSQEEAVQAVEDLLKELKPKLVEILPSLRNSSEEVDQTEESGLGPIEEEEEDQDDDCQSL
DGSDQEQDMDGDTDLYSGSQSQPNEEGGPIEVDVTSTSEDEGEESIKESDDALVTDIPRV
VPCPEDDDFMTAFDRILSESMLQRNQESVKPQTDIVIPMNIKGGNKKVQTIPTAFLEPKI
EEQKNTINFVLMTRKGNKQQFKSLEVPLMSDLAQNLKDREKAERAEKEQVKKLTLDINER
QEEEDYQEMLAAQQRPAVLNLNRDRRHRYQHPKGAPDADLIFGNKYVDIQVASKIH
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccaagaagtattcaacaacgtgacttgtgaatcaaagggtggagatatagag
aaaaaacctgaagtaaggggaaagagttggaaacgtgagcgtgaagaaaggggaaggcgt
cagcaaaatcaacagcagcagcaacaagatgatagctcaaactgtgaaactgaaacggaa
tcatcagacaaatttgctcttgaagaaccagttattttggctgaagaaaagagaggttgg
ggtgatggctggaagaaattagaggactcagtcgaacataactcttccagtcaagacatt
gaagaaggtgatgagttgaaagaacagcaaatgttacaggaaactgaaacagatgcaggg
ggagaagaggaaagtaaacaacacctggaagcctttatcatagagactgtagaaagactg
agaagaaaggctgaactaaggacagcaaacagtaatattgcagcaaaccgtccagaagac
tccttctttagtaagttggactctagtctcaaaaagaacacagcatttgtgaaaagatta
aaaaaccttactgaagctcaaagggactcgcttattaaagacatgaatggactgaatcta
actaagtacatcagtgaagctgcagctgccattgtagaagcaaaactcaagatgtctgac
ctgaacacagcagtaaaaatttgctccctgcttcaccaacgttattccgaattttccact
caacttttagaaaattggcaaaaagttctacccatgaaaaaggatgagaaaataaccaat
cccagtaagataagagttgatctacgtttttattcagagctgatatcatgtggagtgttt
acattaaaagagggactcccattacttggtaatctactgaccattttaactgctacggac
aaagaagagcacaacaatattaatattcttctgagtttttgtaagcactgtggggaagat
tatgctggattggtgcctcagaaaatgagaaatctggctcagaagcatggactagaaatc
cctaaaagtgatttattgcccccagatcgtcagaaaggccttcgtaatctgctgaaagac
tactataggtcactatgtcgtcacgttgtgaaagatcaaaaaacacttcataatatggag
caacacaaccggagaatattacagaccaaaggtgaattaagtactgaaaggaaagagaag
tttgaagcagcccaagtagcctttcagaaactcctgtccagtactcagcaattttctgat
atcatagatgaagaccttcctgagcttcccagagaagatgttagtagtcaagacccagat
gtagcaaatttagatgtacataacagatttaaggatggggagtttgaaggcaccacatct
ctttgggaagatgatgatacaagaagtttttatgagaacataccagatcttaaggctttt
ataccaggtattcttttcaaggatagtgctcaggctcctatactgaaaagtcagctagaa
ccaatggatgcaggcctagaagaagaactcagtaaactggaacttgatgaagtagaagcc
ttggaactagaggaagaaaaattggaagattctgatacaaagtctgaaaccagcagtaaa
caagatgaaaaagatttaacagagacaatcttgcaggatgtagatgaatcagacgaaaat
tctggcatagttgctaccaacaagatgatcctcgatggatttttattttctcttctaaac
tgtgttaacagagaaatgattgaccaggctgctgtggacttttgtatgaatttaaacacg
aaacctaacagaaaaaagttagtccggacattgttcttagtgccacgtacgaggttggat
cttctcccattttatgcccgatttgttgcaactcttaatccttgtatgcctgatgtttcc
aatgatcttgttacattgctcaagcaagattttaagttccatataaaaaagaaagaccaa
atcaacatagaatccaaagtcaaaacagtgaggtttattggtgaactgaccaagtttaac
atctatccaaagtcagaatcactgtattgtttgaaaatgctactgtttgatttcactcat
catcacatcgagatggcttgtaacctattagagacttgtggacgctttttattcagatca
ccagattcgcaccaacgcacaaaagtttacttgagtcaaatgatgagaaagaaatcagtg
atggcaatagacagtcgatatgcaactatggtagaaaatgctttttattactgcaatcca
ccagaagctcccataacagttaaagtagaacgtctcccaattcaagagtatttgcggaag
ctgctgtataaagacctctccaagaataacactgaaaagattttacgccaaatgaggaag
ttaaattgggatgatcctgatatcagtgcctatgctactaagtgtttaatgtccatatgg
aatgttaagtactacaatgttcgatgtgtcgctaacttacttgctggtcttgttgcatat
caggaaaatgttggacctcaggtagttgatggtgtgcttgaagatattagattaggaatg
gaggtaaacccagagttatttttaattctatattcatactcagattcctattctgagctg
gactcaccagataacctttttagaattcgtcttgtctgtattctgctagagacctgtgga
cagtattttaacagtggctcaagtaaaaagaagttggattgtttccttgtcttctttcag
cgttattactggcacaaaaagtcctctgacatattttctgaagaacacccttttcctgtg
actcttgagtttttggtgaaagatacaattcaagtattacgacccaagtttaaactagct
gattctcaggaagaggctgtacaggctgttgaagacctcctgaaagagctgaagccaaaa
cttgtcgaaattcttccatctctgagaaattcttccgaagaggttgaccaaactgaggag
agtggactaggacctattgaagaagaggaagaggatcaagatgatgattgtcaaagttta
gatggcagtgatcaagagcaagacatggatggagatactgatctatacagtggtagtcag
agccagcctaatgaggagggtggacctattgaggtggatgttacgtcaacaagtgaggat
gaaggtgaggaaagcattaaggaaagtgatgatgctttagtaacagatatcccacgtgtt
gttccttgtcctgaagatgatgattttatgactgcctttgacagaatattatctgaaagt
atgctgcaacgtaatcaagagtccgtaaaaccccagactgacattgtcattccaatgaac
ataaaaggtggaaacaaaaaggttcaaacaattcctactgcatttctggagcccaagatt
gaagaacagaaaaacacaattaactttgtacttatgacaagaaagggaaacaagcaacag
ttcaagagtttagaagttcctctcatgtcagatctggctcagaacttaaaggatcgagaa
aaggctgaacgagccgagaaagagcaagtgaaaaaacttactttagacattaatgaaaga
caagaagaagaagattaccaagagatgttggcagctcaacaaaggcctgctgtcctcaat
ctcaaccgagacaggcgccatagataccaacatccaaaaggagctcctgatgctgatctg
atatttgggaacaagtatgttgacatccaggtagcaagtaagatccactag
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