Limulus polyphemus (Atlantic horseshoe crab): 106462896
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Entry
106462896 CDS
T08968
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpol03021
]
106462896
Transcription machinery [BR:
lpol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
106462896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_11
TPR_12
TPR_7
TPR_10
TPR_6
ARM_TT21_5th
TPR_9
ARM_TT21_4th
ANAPC3
PknG_TPR
TPR_EMC2
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
106462896
NCBI-ProteinID:
XP_013778315
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MAGSVEIPLRDTDEVIELDLDQLPEGDEVLGILRQEQAQLHLWVTLALEYYRQGKVEDFI
KLLDISRSDANLDYRDFEHDQMKALDTLAAFYVQQANKEKNKDKKRELFTKATLLYTTAD
KIIMYDQNHLLGRAYFCMLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDFRG
ALAFYKKALRTSPKCPAAVRLGMGHCFYKLGKHEKAKLAFERALQLDPQCVGALVGLAVL
ELNLKSSESIRNGVQMLSKAYRIDSTNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEN
EAMRAESCYQLARAFHIQQDYDQAFQYYYQATQFASPSFVLPHFGLGQMYIYRGDTENAA
QCFEKVLKAQPGNYETIKILGSLYAHSNSQSKRDQAKSHLKKVTEQFPDDVEAWIELAQI
LEQLDIQGALSAYGTATRILNEKVQADVPPEILNNVGALHFRLGNLQEAKKYYEASLERS
RNEAQHDEHYYSAISVTTNYNLARLFEALSQFHKAERLYKNILREHPNYVDCYLRLGCMA
RDRGQIYEASDWFKEALQVNQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQDVTANDT
YSLVALGNVWLQTLHQPTRDKEKEKRHQDRAIAIYKQVLRIDPKNIWAANGIGAVLAHKG
YITEARDVFAQVREATADFCDVWLNISHVYVEQRQYVAAIQMYENCLKKFFKYHNGEILM
YLGRAYFRCGKLRECKQVLLRARRVAPQDTVLLYNIALVLQRLATHVLKDEKSNLKTVLN
AVHELGLAHRYFQYLSVHGDRMKYDLAQANAEARQCQDLLSQAQYHVARARRLDEEEQEL
RRKQEEEREILRQKILEEKRIADEEKQRQEQELIQKRQEFVEKSKNKLVFDEISEEKTHK
RGRGRKTQDDYIYDGSSSGEGGEPKKKKKRPVSGSEGVEGADGEKKRKKKIHRKRSGRPQ
DDSEDEETSQKDRKRRKPSKRQESKKSKKVLDDGLTAKQRSRIVSKATISSSDDSDSDDK
RKNKDQGGSASNEDVRNNSKKDISSNSESGSDSDIKKTKKKIASDSDNGSEKEKKHKRRK
VVSSESDEEKSERSNKTDDDKDRKSSENESDAERSEKGYSASDKHQSDDDDGASVKRGTD
DDASDKHGSADEDSGSVKSAKEQNYSENSDEEQRVHEQSEKEENDSEHSEKEDNASASEE
SGKGNASEHSDQEENATDRSEKHNSDDESRKGDDAESGSEGRSPQNSPVESEENAQNNSS
DSD
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatcagtcgaaattccacttcgtgatacagacgaggtgatagagcttgatttg
gatcaactgcctgaaggagatgaagttttgggaattttacggcaggaacaagcccaactc
cacttatgggttacacttgctttggaatattatcgccaaggaaaagtggaagattttata
aagttgcttgatatttccagatctgatgccaacttagattatagggatttcgaacatgac
caaatgaaggcattggatactttagcagctttttatgttcagcaggcaaacaaagagaaa
aacaaggataagaaaagagagttatttactaaagctactcttttatatactactgctgac
aaaattataatgtatgatcaaaatcacctcttgggtcgagcttacttttgtatgttggaa
ggagataagatggatcaagctgatgctcagtttaattttgttctcaatcagtccccaaac
aacatcccctctttacttggtaaagcctgtatagctttcaacaaaaaagattttagagga
gctctagctttttataaaaaagcacttcgcacaagcccaaaatgtcctgcagcagttaga
ttaggaatgggacattgcttttataaacttggaaaacatgaaaaggcaaaacttgctttt
gaacgagctttgcaactggatccacagtgtgttggtgctttagtgggtttagcagttctt
gagctgaatttaaaatcttcagaatcaattcgtaatggggtacagatgctttccaaagct
tatagaattgattctacaaacccaatggttctcaatcatttagccaaccatttttttttt
aagaaagattatggaaaggtgcagcatctagctcttcatgcttttcataacactgaaaat
gaagcaatgcgtgcagagagctgttatcagctagctcgagcatttcacatacagcaagat
tatgatcaagctttccaatattattaccaggctactcagtttgcttcaccatcatttgtg
ttaccacattttggcctaggtcagatgtacatttatagaggagatactgaaaatgcagca
cagtgttttgaaaaagtattgaaagctcagccaggaaattatgaaactataaagatactg
ggatctctgtatgctcattctaatagtcagtctaaaagagatcaggcaaaatctcattta
aaaaaagtaactgagcaatttccagatgatgtagaagcatggattgaacttgctcaaatt
cttgaacagttagatattcaaggagcactgtctgcttatggcacagctacacgaattttg
aatgaaaaagttcaagctgatgttcctccagaaatattaaacaatgtaggagcacttcat
tttcgcttaggtaatttgcaggaggctaagaaatattatgaggcatcactagaacgttcc
cgtaatgaagcacagcatgatgaacattattatagtgcaatttctgtcacaaccaattac
aatcttgctcgcttatttgaggctctaagtcagtttcacaaagctgaaagactatacaaa
aatattttaagagagcatcctaattatgttgactgctatctccgactaggatgcatggca
agagataggggtcagatttatgaagcttctgattggtttaaagaagctttgcaagttaat
caagaccatcctgatgcatggtcattaattggtaatcttcatcttgcaaaacaagagtgg
ggccctgggcaaaaaaaatttgagcgtattttaaaacaggatgtaacagcaaatgataca
tactctcttgttgctttaggaaatgtttggttgcagacactgcaccaacctacaagagat
aaagaaaaagaaaagagacatcaggatcgagcaattgccatttacaaacaagtacttcgc
atagatcccaaaaatatttgggcagccaatggcataggagcagttcttgcacataagggg
tacattactgaagcgagagatgtctttgcacaggttcgtgaggctactgctgatttttgt
gatgtttggctgaacatatctcatgtttatgttgaacagcgtcaatatgttgcagccatt
cagatgtatgaaaattgtttgaagaagtttttcaagtatcataatggagaaattttgatg
tatttaggaagagcttactttagatgtggaaaattgcgagaatgtaaacaagtacttttg
agagctagacgtgttgccccacaggatactgttctgttgtataatattgccttggtgtta
cagcgtcttgcaacacatgttttaaaagatgaaaaaagtaatcttaaaactgttttgaat
gctgtccatgaacttgggcttgctcacagatattttcagtaccttagtgttcatggtgat
cgtatgaaatatgatcttgctcaagctaatgctgaagctagacagtgtcaggacctctta
agccaagcacagtatcatgtagcaagagcccgtcgtttggatgaagaagagcaagaactt
cgccgtaaacaggaagaagaaagagaaattttaagacagaaaattttagaggagaaacgt
attgctgatgaagaaaaacaacgtcaagaacaggagttaatccaaaaaagacaagagttt
gttgagaagagcaagaataagctggtatttgatgaaatttcagaagaaaagacacataaa
agaggccgtggaaggaaaactcaagatgattacatttatgatggatccagtagtggtgaa
ggaggagagcctaaaaagaaaaaaaagaggcctgtcagtggatctgaaggagttgaaggt
gctgatggagaaaagaaaaggaagaaaaagatccatcgtaaaagaagtggaagaccacaa
gatgatagtgaagatgaagaaacatctcagaaagaccgcaaacgtaggaaaccttctaaa
cgtcaagaaagcaagaagtccaagaaagtactggatgatggcttgacagcaaaacaacga
agtcgaattgtttctaaagcaacaatttcatcaagtgatgattctgacagtgatgacaaa
aggaaaaataaagatcaaggaggtagtgccagtaatgaagatgtaagaaataacagtaaa
aaagatatatcgtccaacagtgaaagtggttctgatagtgatataaaaaaaactaaaaag
aaaatagcttctgattctgataatggttctgaaaaggaaaaaaagcacaagagacgtaaa
gtggtttcttctgagtctgatgaagagaaatcagaaaggtcaaacaaaactgatgatgat
aaggacaggaaatcttctgagaatgaatctgatgcagaaagatcagaaaaaggttacagt
gcttcagataaacaccagtcagatgatgacgatggtgcctctgttaaacgaggcacagat
gatgatgcttctgataaacatggttcagctgatgaagatagtggttcagtcaagtcagca
aaagagcagaattattcagagaattctgatgaggaacaacgtgtccatgagcaatctgaa
aaagaggaaaatgactcagaacattctgaaaaagaagacaatgcctctgcatctgaagaa
tctggaaaaggaaatgcctcggagcattcagatcaagaggagaatgccacagacagatct
gagaaacataattcagatgacgaatcaagaaagggggatgatgctgaatctggcagtgaa
ggaaggtcaccacaaaacagccctgttgaatctgaagagaatgcccaaaataactccagt
gatagtgactga
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