Limulus polyphemus (Atlantic horseshoe crab): 106463160
Help
Entry
106463160 CDS
T08968
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106463160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpol04121
]
106463160
Enzymes [BR:
lpol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106463160
Ubiquitin system [BR:
lpol04121
]
Ubiquitin ligases (E3)
HECT type E3
106463160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Arm
WWE_5
Motif
Other DBs
NCBI-GeneID:
106463160
NCBI-ProteinID:
XP_013778611
LinkDB
All DBs
Position
Unknown
AA seq
2181 aa
AA seq
DB search
MADQPGRQRGGSKRNARHHQQGSRSPICTRSRTRILAQEKSQCEESLVVYEQPDRAGDTV
TDKRQIPVENINECSAPKKQKNNPEGILEVFKNNRSQPSATIDPPSTSALNETVSPSSGS
KVKLSTLTKNHSTRTCSKAEFGVERQLPAPEQWLPPSTSRYSYKVEKVTSASQLETVIKK
KPCRPHKVTSTLTVNSPVVTANFYSEDKPKATSSGTKDGFISHTKSFESSPHPRNQSTNR
RRLKKESNSSLDEASYFQVEVEDLAKHCGGSHNQLSSPFAIKKEPQLRTENLQTLPLNLV
PVDLSCHQPGPSGSNQNKGKGKNRQPGRKTSELQSGTVDGKTPTKGSRATGKAAKINQEK
ATRTKTTGSCASSRRRSSRASKLPAVSSSSVDGGAGRLQGAPGRSGMSEADSGQEGTSTT
FNSEDAANNVPTSSGVSSSMAAAADSESDDNEMGRLQALLEARGLPPHLFGALGPRMQHL
LHRSMGSSASSKAHQLLQGLQATGDEGQQLQAVMEMCQLLVMGNEDTLAGFPVKQVVPAL
INLLSMEHNFDMMNHACRALTYMMEALPRSSAVVVDAVPVFLEKLQVIQCMDVAEQSLTA
LEMLSRRHSKAILHARGVSACLTYLDFFSINAQRAALTIMANCCQNLMTDEFHFVQESLP
ILSARLTQQDKKSVESVCLAFSRFVDCYQNDPKILIEIANHGLLSNIQQLLMVTPPVISS
GTFVMVLRMLAIMCGSCPELAVQLLKQNIAETLRYLLMGSVDPVSDEIELIPRSPQELFE
ITSLIGELMPRLPMDGIFSVDAYLVKPTSSHSDAVVWQWRDDRGAWHPYTGIDSKIIEAA
HQSGEDEISLSTMGRTYTIDFNSMQQINEDTGTTRPVQRRVNHCSGTSSVSTSSISSIDS
RVDCLHENTELAASFIKSLFAVLYEVYSSSAGPAVRHKCLRALLRMVYFAPPELLGKVLK
NQVVSSHVAAMLSSQDLRVVVGALQMAEILMQKLPDIFGVYFCREGVMHRVNELAKAEPQ
QNSPCAKDLSQYSSPPVPISLSFSPCETTLPLANPHTGSSSADGSLHFVSSVLWGSPSSS
SSVSSGPMGLRVLPPNPSNPDEDHCSSIGQMRLSDVLKRKRTPKRGNATSRKVRTEDSPR
DSVNSNFSFRSSSRNERTFDNSPSQLLSASVLSVPASPAASLHSPLPGGSVSNSTNLQCT
GVGHSGRGRLSTAAAKTSSFLASLNPARWGRWSSTSPLPGRSLSSEPSTDQKATSCTNLS
GNREKIKAWIRDQAQKFENQYFKTENHGTLHPAMNVLNRITSSLEHLENVADGGLKALEE
IRDVVVESDISSFEVIHSKLVTKLLHYLTAASGYGACSRDDRLRIFLHVFKKAPLFKIST
LELDKLDPSPLSALVAKLNACVSQLEQFPVKVHDLPGGGGTGSSRGTSTLKFFNTHQLKC
NLQRHPSCSNLRQWRGGPVKIDPLALVQAIERYLVIRGYGRIRDDDDDGSDDENSDEDID
DTMAAMMINQGQARHKLQFLIGENVLPYNMTVYQAIRQYGAGGQGADGHETDTDSENPVG
YANIWVQTHTIWYRPVPDEDPSSNKAIVSSSSNSIHRSQGISSGCSSRRNKGASGGRTSP
KKKSDELWNEGLVPESVPLLSFYLTASLPDSFTVQDPSLEVICLLRVIHALCRYWGTLYD
MSCWNSAISQSEFLNSKLTAKANRQLQDPLAIMTGNLPQWLSQLAYVCPFLFPFETRHLL
FYVTSFDRDRALQRLLDMTPELSSSDSSERVTPRLDRRKRTVSRDDLLKQAEVVMQDLGS
SRALLEIQYENEVGTGLGPTLEFYALVSKEFQRADSDLWRGEAVTVSDGKGPADRTSYIH
SPCGLFPSPLSRSAKVSCVTKIRSKFKLLGKFMAKALMDSRMLDIPMNLIFYKWLLGQEG
SLRSSDIQFIDPGLVLTYFKLEELIVQKLKLEQDNTLTPQNLKKAIESLVLDGCLIEDLN
IDFTLPGYPHIELRKGGRDIALTIHNLEEYLQLVSHWTLYEGVKRQMEAFKEGFESVFPI
AQLQIFFPEELECLFCGSGSSRWDVKNLMECCRPDHGYTHDSRAIKFLFEILSNYNPEEQ
RRFLQFVTGSPRLPVGGFKSLSPPLTIVRKTFDPNENQDDYLPSVMTCVNYLKLPDYTSI
EVMRKKLEIAACEGQHSFHLS
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaacctggtaggcaaagaggggggtccaaaagaaacgctcgccatcatcaa
caggggtcacgatctcctatatgtactaggtcaagaaccagaattttagctcaagaaaaa
tcacagtgtgaagaatctcttgtggtgtacgaacagcctgacagagctggtgacactgtg
acagacaaaaggcaaatccctgtagagaacatcaacgaatgttcagcccctaaaaaacag
aaaaacaatcctgaaggtattttggaagtgtttaaaaataataggagtcagccaagtgcc
acaattgatccacccagcacctcagccttgaatgaaactgtttctccatctagtggtagt
aaagttaaactttctactttaacaaaaaatcatagtacaagaacttgttcgaaagcagag
tttggggttgagcggcaacttccagcaccagaacagtggttaccaccttccacttctaga
tattcttataaggtagaaaaagttacttctgcttcacaactggaaacagtgattaaaaag
aaaccttgcagaccccataaagttacttccacattgactgtgaactctccagttgtcaca
gctaacttttattctgaagacaaacctaaagctacctcttcaggaacaaaagacgggttt
atatcacacaccaaatcttttgaaagttctccacatccaagaaatcaaagcaccaatagg
cgacgcctaaaaaaagagtcaaattcatctttggatgaggcttcttattttcaagttgaa
gttgaagacttagcaaaacattgtggaggcagccataatcagttgtcaagtccttttgct
ataaagaaggaacctcagctgagaactgaaaatctgcaaactctgcctcttaatcttgtt
ccagtagatttgtcttgtcatcagccaggtccttctggctcaaaccaaaacaaagggaag
ggaaaaaatcggcagccaggtagaaaaacttcagaactccagtcaggtactgttgacggt
aaaactcctactaaaggcagtagagcaactgggaaggcagcaaagatcaatcaagaaaag
gccacaagaaccaagacaacggggtcgtgtgctagtagccgtcggcgttcctcccgagca
agcaagcttcctgcagtgagttccagtagtgtggacggaggagcaggccgactacaggga
gctccaggcaggagtggcatgtcagaagcagactcgggacaagaggggacgtcgactact
ttcaacagtgaagatgctgctaataatgtgcctacttcaagtggtgtgagcagttctatg
gcagcagctgcagatagtgaatcagatgataatgaaatgggtaggctacaggctctcctg
gaagctcgaggtctccctcctcatctctttggagccttagggccacgtatgcaacatttg
ttacatcggtcaatgggaagtagtgcaagtagcaaagcccaccaattacttcagggactg
caggctactggagatgagggtcaacaactacaggctgttatggagatgtgtcagttgttg
gtgatgggtaatgaggacacactggctggctttcctgtaaagcaggtagttcctgccctc
atcaatctcctgtcaatggaacacaattttgatatgatgaatcatgcctgtcgtgctctc
acttacatgatggaagctcttccaagatcttctgctgttgtggttgatgctgtacctgta
tttttagaaaagctgcaagtaattcagtgcatggatgttgctgaacagtctcttacagcc
cttgaaatgttatctcgcagacacagcaaggctatcctccatgctagaggagtttctgcc
tgccttacgtacttggatttcttctctataaatgctcagcgagctgccctcacaatcatg
gccaactgttgtcagaatctgatgactgatgagttccactttgtgcaggaatctctgcca
attctgagtgctcgtctcacccagcaggacaagaagtctgtagagagtgtgtgcttggcc
ttttcacgttttgtggactgttatcaaaatgatcctaagatcttgatagaaatagctaat
catggtcttctcagtaatattcagcagttgttaatggtgactcctcccgtcattagctct
ggcacatttgtgatggtattgaggatgttggctataatgtgtggctcatgtcctgagttg
gcagttcagttgcttaaacaaaatatagcagagactttgaggtaccttttgatgggcagt
gttgatcctgtatcagacgaaattgagcttattcccagaagcccccaggaactgtttgaa
atcacatctttaattggagagcttatgccacgattacccatggatggcatattcagtgtg
gatgcttatctggtgaaacctacaagcagccactcggatgctgtagtgtggcaatggaga
gatgatagaggagcttggcatccatacactgggatagatagcaagataatagaggcagcc
catcaatctggtgaagatgaaataagtttatcaactatgggaagaacatatactattgat
ttcaactccatgcagcagattaatgaagacactggaactacaaggccagtgcagcgaagg
gttaaccattgttctggaacatcatcagtgtcaacttcaagtatcagcagtattgattcc
agagtggattgtctccatgagaacactgaacttgctgcatccttcatcaaatctttgttt
gcagtactctatgaagtttatagcagttctgctgggcctgctgtgagacacaaatgtcta
cgagcacttctaagaatggtttactttgctccaccagaactattgggtaaagttctaaaa
aatcaagtagtatcaagccatgtagcagccatgttgtcatctcaagatttgcgggttgtg
gttggagcactacagatggcagaaattttgatgcagaaacttcctgatatatttggggtt
tatttttgccgagaaggtgttatgcaccgggtcaatgaactagctaaagcagagcctcaa
cagaatagtccttgtgctaaggatctgtcacaatattcatctcctccagttccaatatct
ttaagctttagcccttgtgaaactactctcccattggccaatccccatactggttcatct
tcagcagatggctctctgcactttgttagcagtgttctttggggatctccttcctcctcc
tcctcagtatcatcaggaccgatgggtcttcgagttctgccccctaacccctccaatcca
gatgaggatcattgttcttcaattggtcaaatgcgtcttagtgatgtgctcaagagaaaa
aggactccaaaacgtggaaatgctactagtcgtaaagtacgcacagaagacagccccaga
gattctgtgaatagtaatttttcttttcgaagctcaagtcgaaatgagcggacttttgat
aattctccaagtcagttattaagtgcttctgttttgtcagtcccagcctctcctgcagca
agccttcactctcccttgcctggtggttctgtttcaaactcaaccaatttacagtgtaca
ggagtaggtcactctgggagaggacgtctgagtacagctgctgcaaagacttcttctttc
cttgccagtcttaatcctgctcgatggggtcggtggagcagcacttctcctttaccagga
agatccttgagttcggaaccatctacagaccaaaaggccacaagctgtactaatttgtct
gggaatagagagaaaattaaagcttggatcagagatcaagctcaaaagtttgagaaccag
tatttcaagacagaaaatcatggaactttacatccagctatgaatgttcttaatcgaatc
acctcatctttggaacaccttgaaaatgttgctgatggaggactgaaagctctagaagag
attcgtgatgtggtagtagaaagtgatatatcttcatttgaagtcattcacagcaaattg
gttacaaagttgttacactacttgacagctgccagtggttatggagcctgtagtagagat
gaccgtctacgaatatttcttcatgttttcaaaaaagctccattgtttaagatctcaaca
ctggagttagataaacttgacccttctcccctctctgctcttgttgcaaaattgaatgcc
tgtgtaagccagctagaacagtttcctgtaaaagttcatgatttaccaggtggtggtggt
acagggagcagcagaggaacaagcaccctcaaatttttcaacacccaccagctcaagtgc
aatcttcagcgacatccatcatgttccaatcttagacagtggagaggaggacctgtaaaa
attgatccattagcacttgttcaagctatagaaagatatttagttattcgaggatatgga
aggattagggatgatgatgatgatggcagtgatgatgaaaactctgatgaagacattgat
gataccatggctgctatgatgatcaaccaaggccaggcccgtcataagcttcagtttttg
attggggaaaatgttcttccatacaacatgacagtgtatcaagccatcagacagtatggt
gcaggtggtcaaggtgctgatgggcatgagacagacacagactcggagaatcctgttgga
tatgctaacatctgggtgcagactcataccatttggtaccgtccagttcctgatgaagac
ccatcatcgaataaagccattgtaagcagtagtagcaattccattcatcgttctcagggt
atatcttcaggctgttctagtcgccgcaacaagggagcttcaggtggaagaacctcaccc
aagaaaaaaagtgatgaattatggaatgaaggactagttccagaatcagttcctttactt
tccttctacttaactgcttcactcccagattcatttacagttcaagatccttcattagaa
gtgatatgcctccttagggtgatccatgctttatgtcgttactggggaacactgtatgat
atgagctgttggaattcagccatttcccagtcagagttcctgaacagcaagttaacagcc
aaagctaacagacaacttcaagatccattagctataatgactggtaacctaccccagtgg
ttgtctcagttagcttacgtttgcccatttctcttcccctttgaaactcggcatttactg
ttctatgtgacttcttttgatcgagaccgagcactccagaggttgttagatatgacacct
gaactgagcagtagtgacagtagcgagagggtgacaccacgattagaccgaaggaagcgg
acagtttcgcgtgatgatttattaaaacaagcagaagtggttatgcaagatttaggaagt
tccagagctttattggagatacagtatgaaaatgaagtgggaacaggattgggaccaaca
ctggagttttatgcccttgtgtcaaaagagttccagcgagctgattctgatttgtggcga
ggagaagcagtaactgttagtgatggaaaaggtccagcagaccgcacatcatatattcat
tcaccatgtggattattcccctccccactcagccgaagtgccaaggttagttgtgtcaca
aaaatccgtagtaaattcaaactacttgggaagttcatggccaaagctttgatggactct
cgaatgttagatattcctatgaatctgatcttctacaagtggcttcttggtcaggaagga
agcttgcggtcttcagacatccagttcatagatccaggtttagttctcacgtacttcaaa
ctagaagagctgattgtacagaaactgaaactagagcaagataatactcttacaccccag
aacttaaagaaggctatagaaagtctagtgttagatggctgtttaatagaagacttgaac
atagacttcacccttcctggctatcctcacattgaactgagaaaaggtggacgagatatt
gctttaacaatccacaatttagaagaatatttgcaattggtgagtcactggacactatat
gaaggagtcaagaggcagatggaagcctttaaagaagggtttgagtctgtttttcctatt
gcacaactgcaaatattctttcctgaagagttggaatgtttgttctgtggaagtggaagc
agccgctgggatgtgaaaaatcttatggagtgctgtagacctgatcatggttatactcat
gatagccgtgccattaaatttctctttgaaattcttagtaactacaatccagaagaacaa
agaagatttcttcagtttgtcacagggtctcctaggttaccagtaggaggttttaagagc
ttatctcctccactgaccatagtaaggaaaacatttgaccccaatgagaaccaagacgac
tacttgccatcagtcatgacctgtgtaaattacttgaaactccctgattacaccagtata
gaagttatgagaaagaaactagaaattgctgcttgtgaaggacagcactctttccattta
tcttga
DBGET
integrated database retrieval system
