Limulus polyphemus (Atlantic horseshoe crab): 106463824
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Entry
106463824 CDS
T08968
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106463824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106463824
Spliceosome [BR:
lpol03041
]
Complex B
Other components
Prp19-related factors
106463824
Complex C
106463824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_YTH1
zf-CCCH_2
RRM_occluded
zf-CCCH
RRM_PARP14_3
zf-CCCH_4
Nup35_RRM_2
RRM_3
zf-CCCH_3
SpdB
zf-CCCH_10
TetR_C_21
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
106463824
NCBI-ProteinID:
XP_013779352
UniProt:
A0ABM1BCQ8
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MATSKGANTYNRQNWEDAEFPILCQTCLGDNPYIRMTKDRFGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNICQTCLLDLEYGLPVQVRDHALNLKDEVPKSDVNKEYYSQN
MEREVQNLDATQPYGTLSKAQAPSDLLMKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLRRADTMPKLEPPEDMFITTLYVGNLG
EKMTEKDLRDYFYQFGEIRSVTMVSRQQCAFIQFTSRSAAELAAEQSFNKLILCGRRLVI
KWGRSQAKAAASATKEGVEKKLEPVPGLPGALPPPPEELTNNYFNLTDTTNILLPPPPPL
PPPPNVSRPPLPSAGPRYPPPPPPFLRPPGIPPPGPPPALRPIGMFPPPPRIPPPSAPPR
PPPGTSVQSQAIKAPPTHPAIHYPSQDPQRMGSAGPADD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccaaaggagcgaatacttataaccggcagaattgggaagacgcggaattt
ccaattttatgccaaacatgtcttggggacaacccttatattcgaatgaccaaagatcga
tttggaaaagaatgcaagatctgttcacgtccatttacagtatttcgttggtgtccaggt
gctcgtatgcgtttcaagaaaacagaagtttgccagacatgtagtaagctgaaaaacatt
tgtcaaacatgcttgttagatctggaatatgggctgcctgttcaagtcagggatcatgca
ctaaatctgaaagatgaagtgccaaagtcagatgtgaacaaagagtattattcacagaat
atggaaagagaggtacaaaacttagatgctactcaaccatatggaactttatctaaagct
caagcaccaagtgatttactcatgaaattggcccgcactacaccatactataagcgaaat
cgacctcatatatgtagtttctgggtgaaaggagaatgtaagcgtggagaagaatgtcct
tacagacatgaaaaacctacagatccagatgatccactagctgaccaaaatattaaggat
cgttactatggtatcaatgatcctgtggctgataagttgttgagaagggcagacacgatg
ccgaagttggagcctccagaagatatgttcataacaacactttatgttgggaatcttgga
gaaaaaatgactgagaaagatttaagagattatttttatcagtttggtgagattcgatct
gttaccatggtgtcacgtcaacagtgtgcttttatacagtttacgtcacgatctgctgct
gagttggctgccgaacagtcttttaataagctgatcttgtgtggccgtagacttgtaatc
aaatggggaagaagtcaggctaaagcagcagcttcagcaaccaaggaaggagtggaaaag
aaattagaacctgttccaggactaccaggggctttaccacccccaccagaggagttgaca
aacaactatttcaacctaacagatacaacaaacatacttctaccacctcctccaccactt
ccacctccaccaaatgtaagcaggccacctttaccttcagcaggaccaaggtatccacct
cctccaccaccatttctgcgaccaccaggaattcctccacctgggccaccacctgcactt
cgacctattggaatgtttcctcctccacctcgtataccacctccttctgctcctccaaga
cctccaccaggtacatcagtacaaagccaagctatcaaggctccaccaacgcatccagca
atacactatccatcacaggatcctcaaagaatgggttctgctggaccagcagatgattag
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