Limulus polyphemus (Atlantic horseshoe crab): 106463907
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Entry
106463907 CDS
T08968
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106463907
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106463907
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106463907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
AAA_19
AAA_22
G0-G1_switch_2
nSTAND3
HA2_N
Motif
Other DBs
NCBI-GeneID:
106463907
NCBI-ProteinID:
XP_013779441
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MGKSKHKKRKKHSSHKDILSDSDEGKKVSSKSKHGSSLCKTKAWDMEGSERCIQDKNKLE
AKEEATSSITSNTEAGGYRKRSSENHSEGLEMRKKNIHRDGHTSKYLDQNEPVDFENHRA
VLNKMFFGDKDIIKRGSTTYDDFWIFLQKYQAMQMNAGTLKSHSVLMGSTQSGESSMGVP
KLYSKHHKINFNLKTDDVRELMCRGHIFKDEDETDQLTEADVIEFKQILLLYVNFLQKQK
FSKLRKLREAQANLPISKYAQDIVHAVKSHQVIVVAGDTGCGKSTQVPQYLLAAGFQKIA
CTQPRRIACISLCKRVAYETLNEYGSEVAYQIRFEKSKTQHTRILFLTEGLLLRQVASDP
LLSSYDIIILDEVHERHLSCDFLLGVVKCLMIQRPNLKVILMSATINIQLYTEYFGNCPV
IQVPGRLFPIEVFYRPTPAEERCTQTGRMNPNPYIQIMQLIDSKYPSGERGDLLIFLSGM
TEISTLVEAATIYAEQTQKWIILPLHSTLSLAEQDKVFDYPPEGVRKCIISTNIAETSVT
IDGVRFVVDSGKVKEMSYDATYRMQRLQEFCISRASAEQRKGRAGRTGPGVCYRLFSEKE
YEALSPYSTPEIQRVPLDSLILQMISMGLPDARKFPFLEAPPADSLEESIQSLKDQAALT
DEEMLTPMGQMLACLPVDVTIGKILVLGSVFHLVDPVLSLAATLSVQSPFTNRSYRDPDK
MAARRSLESDHGDPFTLLSAYHKWLEVKSNRHESSRKWCNRHGLEEQRFYEITKLRRQFK
DLLQNSGLMERKLYQTSSSRRVQRYGELRQLREMKRQFQQTPHQRKMLRLVSDIEGIVEE
GAEEDVDIKDVEFRMSNDCNQVQALLSTSNAYTHKDLVMLKLIVASGLYPQVAVADEHNS
YKSDSDQLFHTKAKPFVMLHPMSVLALQPDLLQLREMDVEQMQGFTSRTPLSMKHQLLTY
LLLLETTKPYLVNCLRVPAAHSLLLLSHSLDTNQDFTRIVCDGWLELRFVNGEGAQQFVL
QAIRIRDLWEDVLQNIFQETVSTPASDHELSREVRKKQQTLPKLLDRYLHLEVLHTIRRL
LAADLKELYIGSEDFYTSEGTSYMAGVFGEVNEYRAHPKKGGLVVKTYLTYNCILDVDQT
TLQYIQKPWLCPKCHQELTLSVLDQVRHQEQCQANENDEEEAQKRLSMNSLKKAFFCSEC
QEELFLTSTEMLRHKKSHMQQEKV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcaaaacacaaaaagagaaagaaacactctagtcataaagacattttaagt
gacagtgatgagggaaaaaaagtgtcaagtaaatcaaaacatggctcaagtctttgtaag
acaaaagcatgggatatggaaggttctgaaagatgtattcaagataaaaacaaacttgag
gccaaggaagaggctacttcttcaataactagtaatacggaggctggtggatataggaaa
agaagttcagaaaatcacagtgaaggtttggagatgagaaaaaagaatattcatagagat
ggtcacaccagtaaatatttagatcagaatgagccagtagattttgagaatcatcgtgct
gtattaaataaaatgttttttggtgataaagacatcatcaaaagaggttcaacaacgtat
gatgatttttggatttttcttcaaaaatatcaagctatgcaaatgaatgctggaactttg
aaaagtcattcagttttaatgggatctacgcaatcaggtgagagttcgatgggggttcca
aaattgtacagtaagcaccacaagataaattttaatttgaaaacagatgacgtaagagag
ctgatgtgtcgaggacatatttttaaggatgaggatgaaacagaccagttaacagaagct
gatgtaattgaattcaaacaaatccttcttctttatgttaattttctgcaaaaacagaaa
ttttcaaaactgcgaaaactcagagaagcacaagccaacctaccaatttccaaatatgct
caagatattgttcatgctgtaaaatctcatcaggttatagttgtggcaggagataccggt
tgtgggaagtccactcaagttccccagtacctgttagctgctggtttccaaaagatagct
tgcacacaaccacgaagaattgcctgtatctctctctgcaaacgagtagcttatgaaaca
cttaatgaatatggctctgaagttgcttatcaaattcgctttgaaaaaagcaagacacaa
cacactagaattctgtttttaactgaaggattactcctccgacaagttgcctcagatcct
ttgttgtcatcctatgatattattattttagatgaagtacatgagcgccatctatcttgt
gacttccttctaggagtagtgaagtgcctgatgatccaacgtcccaacctaaaggttata
ctgatgtcagcaacaatcaacatccaactttatactgagtattttggtaactgtccagtg
atacaagttcctggtcgtctgtttccaattgaagtgttttatcgtccaacaccagcagaa
gaacgttgtacccaaactggtcgaatgaaccctaatccttatattcagataatgcaacta
attgatagtaagtacccctctggtgagagaggtgatctgctaatatttctaagtggaatg
actgagatctcaactcttgttgaagcagctaccatttatgcagagcagacacagaaatgg
ataattcttcctttacacagtactttatcactggctgaacaagataaggtgtttgattat
cctcctgagggtgtacgtaagtgcataatatccacaaacatagctgaaacctcggtcact
atagacggagtcaggtttgtggttgattctgggaaagtaaaagagatgagctacgatgcc
acttatcgcatgcaaagacttcaagagttctgcattagtcgagccagtgcagaacagcga
aaaggacgtgcaggtcgtactggcccaggagtttgttatcgtcttttctcagagaaagaa
tatgaagccctgtcaccgtactctacaccagaaattcagcgggtacccttagattcatta
attcttcaaatgatctctatgggtttaccagatgctcggaaattcccatttttggaagct
ccccctgctgatagcttggaggagtcaattcagagcttgaaagaccaggctgccctaaca
gacgaagagatgctcactcccatgggccaaatgctagcttgtcttcctgtggatgtgaca
atagggaaaatactggtcctaggttcagtgtttcatttagtggatccagtactttcactt
gctgctacacttagtgttcagtcaccatttaccaatcgatcttaccgtgatcctgataaa
atggctgctaggcgatccttggaatcagaccatggagatccatttactcttcttagtgct
taccataagtggttagaggtgaagtccaatcgccatgaatcctccagaaaatggtgtaac
agacatggactggaggagcagaggttctatgaaattacaaagctgagacgacaattcaag
gatcttcttcagaattcaggactaatggaacgcaagctttaccagactagcagctcccgg
agagttcaaagatatggagaactacgtcaacttagagaaatgaagagacaattccaacaa
actccacaccaacgtaaaatgctaagacttgtgtcagatattgagggaattgttgaggaa
ggggctgaagaggatgtagacattaaagatgtagaatttcgaatgtcaaatgattgcaac
caggtccaggctttactctctactagtaatgcttacactcacaaggacctcgtgatgttg
aagcttatagtagctagtggactttacccacaagtagcagtggcagatgagcacaactcc
tacaagagtgattcagatcagctttttcacaccaaagcaaaaccatttgttatgcttcat
cccatgagtgttctagctctacagccagatctgcttcagctccgagaaatggatgttgaa
cagatgcagggatttacttcaagaacaccgctgagcatgaaacatcagctgctgacatac
ttgttgttactagaaactacaaaaccttatcttgtcaactgtttacgggtgcctgctgct
cattcgttactactactgtctcacagtctagacacaaatcaggatttcaccaggattgtc
tgtgatggttggttagaactaaggtttgtaaatggagaaggagctcaacagtttgtttta
caagccattaggattagagatctgtgggaagacgttttacaaaacatatttcaagaaact
gtttccacacccgccagtgaccatgaactcagtagggaagtgagaaaaaaacaacaaact
ttaccaaagttgcttgacaggtatcttcatcttgaggttttacatactatccgcaggctt
ctggcagcagacttaaaagaactctacattggttcagaagacttctatacttcagaaggg
acatcatacatggctggtgtgtttggtgaagttaatgagtacagggctcatccaaagaaa
ggagggcttgtagtgaaaacatatcttacgtacaactgcatacttgatgttgaccaaacc
acactccagtacatccagaaaccttggttgtgtcctaagtgtcatcaggagttgacattg
tcagtgttggaccaagtaagacaccaggaacagtgccaagctaatgaaaatgatgaagag
gaagcacaaaaaagactgtctatgaattctttgaaaaaagcttttttctgctctgaatgt
caagaagaattgttcttaacctctactgagatgctacgtcataaaaaatcccacatgcaa
caagaaaaagtttga
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