Limulus polyphemus (Atlantic horseshoe crab): 106464694
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Entry
106464694 CDS
T08968
Name
(RefSeq) collagen alpha-2(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04382
Cornified envelope formation
lpol04512
ECM-receptor interaction
lpol04518
Integrin signaling
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106464694
04518 Integrin signaling
106464694
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106464694
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106464694
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpol04147
]
106464694
00536 Glycosaminoglycan binding proteins [BR:
lpol00536
]
106464694
Exosome [BR:
lpol04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106464694
Glycosaminoglycan binding proteins [BR:
lpol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106464694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106464694
NCBI-ProteinID:
XP_022248170
UniProt:
A0ABM1SX14
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MSIGQRYREVFQGRRTATIARYGSFVRVSTWLCLIFFILNIVAIKANRRGDIGIIDWNRN
QSVICRGRDCKGCYCVGEKGNRGTPGLPGPRGVQGPRGFVGKEGLPGDKGDKGEPGVQGL
RGPKGDRGMMGMPGFPGIPGPQGLPGPPGLKGLPGFDGCNGTDGLPGKPGRPGDHGPIGP
PGVPGSKGQKGEPASGRSGLKGQKGEPGKDGLPGYPGGPGKDGVRGPPGEPGLRGLPGIR
GEPGYPGLKGDRDVEKIGPKGEPGEKGIRGSPGPPASCPSEVIRRNQTFIGAKGEKGIPG
LKGDRGMRGERGFPGSPGLPGHPGLQGIKGEKGLPGIPGPKGRDGFPGARGPPGLKGDRG
EDGFPGADGPRGLKGNPGIPGDPGPRGLPGPPGLSLGGKGTPGPIGPPGPRGFPGPPGYP
GEDGKSGSDGLPGLPGPPGGIGVPGSPGIEGPPGPKGNKGSPGLDGLNGRRGPPGLPGVP
GPKGEPGFKGDCGISVPGPKGMDGAPGLNGIPGQKGERGPKGERGFPGDSLLGIPGPPGL
PGQKGEPGLDGIPGRNGRPGLPGVKGEPGICNDCQPGQKGEKGERGLIGAPGLTGLRGPV
GPHGFPGEKGNDGLPGLIGSPGEDGEHGIPGRDGQKGQKGEPAFVKGVIGPKGDKGDQGP
PGPIGNPGREGQPGVHGPPGFPGVKGDKGLQGLPGNVGLRGPPGPMGFPGPKGESSVGRP
GPRGEKGDQGLPGNVGYRGPKGERGVPGGPSRPGPPGIPGRDGEKGEPGPVGFPGKDGLP
GINGLPGEDGLPGLPGPKGFPGPSGEKGNPGRSGVPGEPGIVGPRGNPGLPGQPGLKGEK
GIPGYGRPGSPGLPGPRGPKGSKGYPGSEGQKGECGLPGLPGPKGQPGEFGLHGPRGFKG
DKGEPALEGLPGPPGPAGRDGIKGEKGYVGPPGVQGPPGRPGEVGERGLPGLPGLPGFDG
QKGEPGVPGRDGVGVPGLKGYKGEPGLPGPPGVPGPPGRNGLPGVKGDKGVRGFDGLPGP
EGPRGFVGPKGIPGYHGLPGPKGEPGLAAAKGEKGEPGLPGILGPPGAPGRDGFDGLPGQ
KGNQGPQGVGLPGPRGPKGDRGPTGPPGIRGFDGQKGEPGLPGMPGDRGYDGKPGPRGLP
GLPGIDGPPGPPGKPGDIGLPGFPGPKGIRGAPGIPGLTGPKGDVGPPGRDGIPGLYGLK
GNKGEKGLRGFPGQGFGEKGDRGPPGTEGSKGERGITGPPGFPGEKGDRGPRGLDGLIGK
DGPAGLPGEPGPVGPRGPPGEPGHSYRGEPGIPGKPGEDGLPGIDGSKGEPGRPGLPGQR
GEPGDPGYVGHPGPKGDLGPSGPPGLPGTGFPGPKGSTGFPGIPGQKGDKGFEGLPGPPG
LPGVSGRPGLDGLPGVSGEKGDKGERGFPGQPGLPGLNGERGFPGPPGPRGPPGLKGDKG
AKGSKGIVKDVIKGMKGEPGPPGVPGRKGERGLPGRPGIPGVKGDSGQPGLVGLRGFPGP
EGMKGNPGLPGLPGIRGYPGEKGSQGPPGLPGKGYGDYLMGFLLVRHSQSISVPQCPQGM
PKVWDGYSLLYIEGNEKSHNQDLGYAGSCLSRFSSMPFLFCDFNNVCNYASRNDKSYWLS
TTAPIPMMPVSENAIRQYISRCVVCEAPANVIAIHSQSLQVPDCPQGWYNLWIGYSFAMH
TAAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTVDSKAQFERP
LSETLKAGNLRTRVSRCAVCIKRPHISHEFS
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtctataggccagagatatcgcgaggtttttcaaggccggagaacagcaacaattgcg
agatatggatcgtttgtgagagttagtacatggttatgccttatattctttattcttaac
atcgtagcaataaaagcgaacagaagaggcgacattggaataatcgactggaatagaaat
caaagtgtgatttgcagaggaagagactgtaaaggatgctactgtgtcggagaaaaaggg
aacaggggcacaccaggtttaccagggccaagaggtgttcaaggcccaagaggttttgta
ggaaaggaaggattgccaggtgataaaggagataagggagaaccaggtgttcaagggcta
cgaggtccaaaaggagatcgagggatgatgggtatgcctggatttccaggtattcctggt
cctcagggattgcctggtccaccaggtctaaaaggtttgcctggctttgatggatgtaat
ggaacagatggtttacctggcaaaccaggcagacctggtgatcatggtcctatagggcct
ccaggagttccaggctccaaaggtcagaaaggtgaacctgcctctgggcgttcaggatta
aaaggtcaaaaaggagaaccaggaaaagatggattgccaggatatccaggtggaccaggg
aaagatggagttaggggtcccccaggagaacctggattaagaggactgccaggaatacgt
ggggaacctggatatccaggactaaaaggagaccgtgatgttgaaaaaattggacctaaa
ggagaaccaggagaaaaagggatcagaggctcaccaggtcctccagcatcatgtccttca
gaagtgattcgaaggaaccaaacttttattggagcaaaaggtgaaaagggaattcctggg
cttaagggtgaccgtggaatgagaggtgaaagaggttttccaggatctccaggtttacct
ggacacccaggattacaaggaataaaaggagagaaaggtttaccaggaattcctggacca
aagggtagagatggatttcctggagcacgtggaccacctggacttaagggggacagagga
gaggatggatttcctggtgctgatggaccacgtggattgaaaggaaatccaggaatacct
ggagatcctggacctcggggactaccaggtcctcctggactttctttgggaggaaaggga
acacctggacctatagggcctcctggacctcgtggctttcctggcccacctggctatcct
ggagaagatggaaaatcaggatctgatgggcttcctgggcttcctggtccaccaggtgga
ataggtgtgcctggttctcctggaatagaaggaccacctggtcctaaaggaaacaaagga
tcccctggacttgatgggcttaatggacgcagaggaccacctggtctgccaggtgtacct
ggtccaaagggtgaacctggatttaaaggagactgtggcatatcagttcctggtcctaaa
ggaatggatggtgctccaggattgaatggaattcctggacaaaaaggagagagagggcca
aaaggagaaagagggttcccaggtgactcacttttaggtattcctggacctcctggacta
ccaggacaaaaaggagaaccaggtcttgatggaattcctggccgtaatggacgccctggc
ttgcctggtgtaaaaggagaaccaggaatttgtaatgactgtcaaccaggtcagaagggt
gagaaaggggaacgaggattgattggagctccaggacttacaggtctacgtgggcctgtt
ggacctcatgggtttccaggagaaaaagggaatgatggacttccaggtttaattggatca
cctggtgaagatggtgaacatgggattccaggtcgtgatggtcagaagggacaaaaagga
gaacctgcttttgtaaaaggagtcattggaccaaaaggtgataaaggagatcaaggacca
ccaggcccaattggaaaccctggacgtgaaggacaacctggtgtccatggaccacctgga
tttcctggtgtgaaaggtgataagggattacaaggactccctggaaatgtgggtcttcgt
ggtcctcctggtcctatgggttttcctggtccaaagggagagtcttctgtaggtcgacca
gggccacgtggtgaaaagggagatcaaggacttccaggaaatgttggttatagaggacca
aaaggagaaagaggagttccaggagggcctagtcgccctggtcctccaggaataccaggt
agagatggagaaaagggtgaaccaggtccagttggatttcctggaaaagatggcttacct
ggaattaatggcctacctggagaggatggcttacctggacttccaggaccaaaaggtttt
cctggcccaagtggagaaaagggaaatcctggacgatctggagtacctggagagccagga
attgttggtccacgtggaaatcctggcttacctggacaaccaggattaaaaggtgaaaag
ggtataccaggttatggtcgtcctggttcaccaggtttacctggccctagagggcctaag
gggagcaaaggatatccagggagtgagggacaaaaaggtgaatgtggcctaccaggatta
ccaggtccaaaaggccaaccaggagagtttggcctccatgggccacgtggctttaagggg
gacaagggggaacctgcattggaaggcttacccggccctcctggacctgctggacgtgat
ggaatcaagggagagaaaggatatgttggaccacctggtgtacaagggcctcctggacgt
cctggagaagttggagaaagagggttgcctggtttacctggacttcctggatttgatggg
caaaagggagaacctggtgttcctggaagagatggggttggagttcctggattaaaaggt
tacaaaggagaaccagggcttccaggtccacctggtgtccctggaccacctggaagaaat
ggattacctggagttaaaggagataaaggtgtgagaggctttgatggtttacctggacct
gagggaccaagaggatttgtaggacctaaaggaattcctggatatcatggactgcctgga
ccaaaaggtgaaccaggcttagcagcagcaaagggggaaaagggggagcctggattacct
ggtattttgggaccacccggagctccagggagagatggatttgatggattacctggtcag
aaaggaaatcaaggtccacaaggagtaggactgcctggacctcgtggaccaaagggagac
agaggtcctactgggcctcctgggattcgaggatttgatggccagaagggtgaaccaggg
ttaccaggcatgccaggtgacagaggttatgatggaaagcctggaccaagaggacttcct
gggctacctggaattgatgggcctccaggaccccctggaaaacctggtgacattggtttg
ccagggttccctgggccaaaaggaattcgaggagcacctggtatacctggtttaactgga
ccaaaaggtgatgtgggaccaccaggtagagatggtattcctggattgtatggcttaaaa
ggcaataaaggtgaaaaaggacttcgtgggtttccaggacaagggtttggagaaaaaggt
gacagaggtcctcccggaacagaaggttcaaaaggagaaagaggaattactggacctcct
ggatttcctggtgaaaaaggagatcgtggcccaagaggattagatggacttattgggaaa
gacggacctgcaggattaccaggagaaccaggacctgtaggtcccagaggaccaccaggt
gaaccaggccattcatatcgaggagaaccaggaattccaggtaaaccaggtgaggatgga
cttcctggaattgatggaagtaaaggagagccaggtcgacctggtctaccaggacagcgg
ggagagcctggagatcctggatatgtgggtcatccaggtccaaagggagatcttggccca
tcaggaccaccaggactgccaggaacaggatttccaggccctaaaggaagtactggtttc
cctggaattccaggacagaaaggagataaaggatttgaaggccttccaggaccccctggt
ttacctggagtttcaggaagaccaggtttggatggattgccaggtgtatctggagagaaa
ggagataaaggtgaacgaggatttcctggacagcctggcttaccagggttaaatggagaa
agaggatttccaggaccacctggtcctcgtggcccacctggactcaaaggagataaaggt
gcaaaaggatcaaagggaatagtaaaagatgttattaaaggtatgaaaggagaaccaggt
ccaccaggtgtccctggacgaaaaggtgaaagaggactaccaggaagaccaggcattcca
ggtgtgaaaggtgattctggacaaccgggtcttgtaggccttcggggttttccagggcct
gaaggaatgaaaggaaatcctggtttaccaggactaccaggaatacgaggttatccaggt
gaaaaaggttcacaaggacccccaggtctaccagggaaaggttatggagattacctgatg
ggttttcttctggttagacacagtcaatctattagtgttcctcagtgtccacagggtatg
cccaaagtttgggatggatatagccttttgtatattgaaggcaatgaaaagtcacataat
caggatctgggttatgctggttcctgtttatcccgtttcagttccatgccattccttttc
tgtgacttcaacaacgtttgcaattatgcaagtaggaatgacaaatcttattggttatca
acaactgctcctattcctatgatgccggtttcagagaatgctattcgacagtacattagt
cgttgtgtggtttgtgaggcaccagctaatgttattgctatccatagtcagtcacttcaa
gtcccagattgccctcaaggctggtataacctgtggataggctacagttttgctatgcac
acagcagctggagcagaaggaggaggtcaatcactttctagtccgggaagttgtctggaa
gattttcgggctactccattcattgaatgtaatggagctcggggcagttgccattatttc
gctaataaattcagcttttggttgacaactgtggattcaaaagctcaatttgaaagacca
ttgagtgagactcttaaagcaggaaatctgagaactcgagttagcaggtgtgcagtttgt
ataaagagaccacatattagccatgagttttcataa
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integrated database retrieval system
