Limulus polyphemus (Atlantic horseshoe crab): 106464935
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Entry
106464935 CDS
T08968
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpol03021
]
106464935
Transcription machinery [BR:
lpol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106464935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TPR_Trm732_C
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
106464935
NCBI-ProteinID:
XP_013780563
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MDVNPLNCVTGRGSWHSDGLDRLFLLLDTGSSPVTRKAAALQLGDVQKLHPHELRNLLAK
RKGGSSAAVDWTGRMTFSKFDINKVIQHGGHLLASEGKEYELDETTGVNCKEKVALERQL
LNKRLGLDIAERMGIDTNDIFSNDDLQLTAKEEKNGEAKKALSEVFETELSQITPNLGDK
DISKISKRRSRLLAKQKSKESPDYISQSFDKDGEPQVKKPRRTTTVLVEQPSTEDTLLLD
NVPDNESLWEESREWPLESFCDEVMQDLFSPSWEERHGAAIALREIVKIHGKGAGKTVDT
PSNQMELVNQLWLEDLALRLLCVLALDKFGDFISDQVVAPVRETCAQALGSVLNLMWQSR
VEGILHIVLQLMGHEEWEARHGGLLVLKYLLAIRLDMTLRLLPVVFHPVFQGLQDPVDDV
SAVAAAVFVPVTDQLVEALPGKVPEVIASLWDSLLELDDLTASTSSILMLLSALLSHPSR
ESSLEMPLADFVPRLWPFLGHSSSVVRKSALQTLVTLTTKCKQQLCEKWLPLVLSDALRL
LYQRCLLENIEEILQLSYQAWKQVVTRAPLGSLLTAACPFLSGWLCMMMQPAQLAINPAV
ITTWLEIKHKIKEKSHGKGRKSSSSEAHIKDGPEQYYLGGVESLSDSSLERDKCVMRARH
IAARFLGLLSCFITKPMPGMVYTTEMESPIECFAKLLLFHLNSKSALQRMAVGLVLIEWA
EFEKDNSCPLSVKEKCFCCLCENIYFDEIALAFTRVQQECKDFMAMLRHYKLPLDTTFQT
GVVLTLDQATALSTTVFSTLVQTTKLKPKVLETLDERRRSVLRSVTQTSHDQLALNNVVQ
SSLAAALVALHYLPDKLNPIIRPLMESIKKEENEQQQYLAAKSLIKLLNLCMERIPCPNP
KVIKNITTFLCTDSTTTPNVTTHQALVQESKGTEEGNGSRVSTPVDVADQYTGILLLHKM
QKLAEKVTLRRSNSINNKRAICTTSTSIDTVSDDTFQTDDETHQNQIQKRGATFAITEAA
RYFGVELPQKLPKLWEITFHTLKNSIDASNFDPISLLKNDAQAQDLVNSFQVLEVIGSAL
HPQLHSELISLLPYVSCCLKHPYSAVRHMSARTLGMFSKVITEETMKLVLGDVLERLERI
DDDTQRQGAIEALACVIDHLGLNIVPYIVLLIVPVLGKMTDHNESVRLMATHCFASLIRL
MPLEGEFKDNPKLCPELNRKKIQERQFLDQLFDPKKIENYKVSIPIKAELRSYQQEGVNW
LAFLNKYKLHGILCDDMGLGKTLQSLCIVGADHYNRDQKYKEKKSPDSKPLPSLVVCPPT
LTGHWAYEVEKFVHPHYLNPLHYTGPPAERTRLRSKAKRHNLIIASYDIVRNDIDFFGSI
NWNYCILDEGHIIKNGKTKLAKAIKQLTANHRLILTGTPIQNNVLELWSLFDFLMPGFLG
TEKQFTARYSKPILQSRDAKSSSKEQEAGVLAMESLHRQVLPFLLRRMKEDVLKDLPPKI
IQDYYCDLSPLQVQLYEDFARSRAKQNLDDTLSDEETVSVQGTAHIFQALQYLRKVCNHP
KLVLGTQHPEYERFINQLKKQNSALTDIQHAAKLCALRQLLLDCGIGNTPLTTSAGQSGP
EPVVNQHRALVFCQLKSMLDIVERDLFKVHMPNVSYLRLDGSIPAGQRHSVVHQFNNDPS
IDILLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRG
TLEEKIMGLQKFKMTIANTVISQENSSLQTMGTDQLLELFTLDDCKKGENAAAKSSTVTH
DGKGMKAVLENLPELWDADQYEQEYDLSNFLKALKK
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaacccactgaactgtgtgacaggaagaggatcttggcatagtgatggattg
gatcgccttttccttctcttggacactggctcctctcctgtcacaagaaaagctgctgca
ttacaacttggagatgtacaaaagcttcatcctcatgaactgcgcaacttgttggccaaa
aggaaaggtggttcttctgctgctgttgattggacaggccgcatgaccttttcgaagttt
gacatcaacaaagttattcagcatggaggtcaccttttggcttcagaaggaaaagaatat
gaattagatgaaacaacaggtgtgaactgtaaagagaaagttgcactagaacgtcaactg
ttgaataaaagattggggctagatatagctgagcgaatgggaatagacacaaatgatata
ttctcaaatgatgatcttcagcttactgctaaagaagaaaagaatggagaagcaaagaag
gccttatctgaagtttttgaaacagaactgtcacaaatcactccaaatctaggtgataaa
gacattagtaaaattagcaaaagacgatctcgtttgttggctaaacaaaagtccaaggaa
tccccggattatatctcccagagttttgataaagatggtgagccacaagttaagaaacct
agaagaaccactactgttcttgttgaacaaccatctacagaagatactcttcttcttgac
aatgttcctgataatgaaagtctatgggaagagtctagggaatggccattagaatcattt
tgtgatgaggtcatgcaggatttgtttagtccttcatgggaagaacgacatggtgctgcc
atagcattgagagagatagtaaaaattcatggcaaaggagctggcaaaactgttgataca
ccctcaaaccagatggagttagtaaatcagctgtggcttgaagatttggcactgagattg
ttgtgtgtcctagccttagataagtttggagacttcatttctgaccaagttgtggctcct
gtacgagaaacctgtgcccaggctttaggttcagttctaaatttaatgtggcaatctaga
gtggaagggatactacatattgttcttcagttgatggggcatgaggagtgggaagcccgg
catggaggattgctggttctcaaatacttgttagctattcgactcgatatgactttgaga
ctgttacctgtagtgttccatcctgtattccaaggacttcaagatccagtggatgatgtc
agtgctgttgctgctgctgtctttgttcctgttacagatcaacttgtagaggcactgcca
ggaaaagttccagaagttatagcatctttatgggattcgttactagaacttgatgattta
acagcatcaactagcagtattctaatgctgttatctgctcttctttcccatccatcaaga
gaaagcagtttagagatgccattggctgattttgtacctagattatggccatttttagga
cacagttcttcagttgtacgtaaatcagcacttcaaacgttggtaactttaacaacaaaa
tgtaaacaacagttatgtgaaaagtggcttcctctagttttatctgatgccttaagactt
ttgtatcaacgatgtttgctggaaaacattgaagaaatattgcaactctcatatcaggca
tggaagcaggttgttacaagagcaccactaggaagtcttcttactgcagcctgccctttt
ctgagtggctggttgtgtatgatgatgcaacctgctcaattagctatcaatcctgctgtg
ataaccacttggttggagataaaacataaaattaaggaaaaaagtcatggtaagggaaga
aagtcaagcagttcagaagctcatataaaagatgggccagagcagtattacctaggtgga
gtagaatctcttagtgacagctccttggaacgtgataaatgtgttatgagggccaggcac
atcgcggcaaggttccttggattactgtcctgctttatcaccaaacctatgccaggtatg
gtatataccacagaaatggagtctcctattgagtgctttgcaaaacttctacttttccac
ttaaactctaagtcagcattgcagagaatggctgttgggcttgtattgatagaatgggca
gagtttgaaaaggataattcctgtccacttagtgtgaaggagaagtgtttttgttgcttg
tgtgaaaatatatactttgatgagattgccttggcctttacaagagtccaacaggaatgc
aaagatttcatggccatgctgcgacattataaacttccactagataccacatttcaaaca
ggagtagtattaacattggaccaagccacagctctttccacaacagtattttctacactt
gtccaaacaaccaaactaaagcctaaagtgctagagacactagatgagagacggcgatct
gtacttaggagtgtgacacagacaagtcatgatcaattggcactgaacaatgtagtgcag
tcgtctttggcagctgcactagttgcattacattatcttcctgataaactcaacccaatc
attaggcctttaatggaatcaataaagaaagaagaaaatgaacagcagcagtacttagca
gcaaagagtctcattaagctactgaatctatgtatggagaggattccttgtccaaatcca
aaggtaatcaagaacataactacttttctttgcactgattctacaaccactcccaatgtc
acaacacaccaagctttggtgcaggaaagtaaaggtactgaagaaggcaatggaagtcgt
gtctctactccggtagatgttgcggatcaatatactggaatattgctgctccataaaatg
caaaaattagctgagaaagtgactctccggagatcaaattctataaataacaaacgtgcc
atctgtactacttcaactagtatagatactgtttctgatgacacttttcaaactgatgat
gagacacaccaaaatcaaatacagaaaaggggagcaacttttgccattacagaagctgca
aggtattttggtgttgaacttcctcaaaaattgccaaaactttgggagattactttccat
accttgaaaaattctatagatgcttccaactttgaccctatttctcttctaaaaaatgat
gctcaagctcaagatttagtgaatagttttcaagttcttgaagttattggttcagctctt
catcctcagctacacagtgagttgatttctcttctgccatatgtttcctgttgtttgaaa
catccttacagtgcagtacgtcacatgtctgctcgaaccttaggtatgttcagtaaagtt
ataactgaagaaactatgaagttggtgctaggcgatgttcttgagagattggagaggatt
gatgatgacactcaacgacagggtgctatagaggcactagcctgtgttattgaccattta
ggtttaaacatcgtaccatacatagtccttcttatagtcccagttttgggaaagatgact
gaccacaatgaaagtgtcaggcttatggctacccactgttttgcttctctcatcagactc
atgcctttggagggtgagtttaaggataatccaaagctctgtccagagctaaatagaaag
aagatacaggaacggcaatttttagaccaactctttgatccaaagaagattgaaaattac
aaagtgtctatacccatcaaggcagaactaagatcttatcaacaggagggcgttaattgg
ctggcttttttgaacaagtacaaattgcatggaattctgtgtgatgacatggggctaggg
aagactctgcagtccttgtgcattgtaggagctgatcattacaatagggaccaaaagtac
aaggaaaagaaaagccctgatagtaagccactgccatccctggtggtatgccctcccaca
ttaacaggtcactgggcatatgaagtagagaagtttgttcatccacattaccttaatcca
ctacattatacaggtccacctgctgagagaactcggttaagaagcaaggccaaacgacac
aatcttatcatagcatcatatgacattgtacgtaatgacattgatttctttggatctatc
aactggaattactgtatcttggatgaaggtcacatcattaaaaatggaaagactaagctg
gccaaagccattaaacagcttacagcaaaccataggctaatccttactggaacacctatc
cagaacaatgttctagaactgtggtctctgtttgactttctcatgccgggattccttgga
actgaaaaacaatttacagcacgttacagcaagccaatactacagagcagagatgcaaaa
tcttcatccaaagagcaggaagctggtgttcttgccatggagtctctacacagacaggtg
ttaccattcttgctgaggagaatgaaggaagatgttctgaaagatcttccaccaaagatc
atacaggattactactgtgacctcagtccacttcaggttcaattgtatgaagactttgcc
cgcagtcgtgccaagcagaatctggatgacaccctgagtgatgaagagacagtgagtgtc
caaggaacagcacacatctttcaggccttgcagtatcttcggaaagtgtgtaaccaccca
aagttggtcctgggaactcagcatccagagtatgaacgtttcatcaatcagttaaagaaa
cagaacagtgctttgactgacatccagcatgctgccaaactgtgtgctctcagacaactc
ttgcttgactgtggaataggtaacactccactgacaacttcagctggtcagtcaggtcca
gagcctgtggttaatcagcaccgtgccttggttttctgtcagttgaagagtatgctagat
attgtagagcgagatttgttcaaagttcatatgccaaatgtgagctacctacgattggat
ggaagtatccctgctggacaacgacattctgtggtacatcagtttaataatgatccttca
attgacattttgcttttaacaactcaagtgggaggattaggccttaatcttactggagct
gacactgtcatctttgttgaacacgactggaatccaatgaaagatttgcaggcaatggac
agagctcatcgtattggtcagaagaaggttgtcaatgtatatcgtcttattacacgagga
acacttgaagaaaaaataatgggacttcagaaattcaaaatgaccatagccaacacagtc
atcagccaggagaattccagtctccaaacaatgggcacagaccagcttcttgagcttttc
accttagacgattgcaagaaaggagaaaatgctgctgcaaagtcaagtacagttacacac
gacggaaaagggatgaaggcagtattagaaaacttgccagaactctgggatgcagatcag
tatgaacaagaatacgacttgtccaattttctaaaagcattgaaaaaataa
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