Limulus polyphemus (Atlantic horseshoe crab): 106465057
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Entry
106465057 CDS
T08968
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106465057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106465057
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106465057
Spliceosome [BR:
lpol03041
]
Complex A
U2 snRNP components
U2 related factors
106465057
Complex B
106465057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
SNF2-rel_dom
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
106465057
NCBI-ProteinID:
XP_013780706
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRDRNALLECRKTKMCYRNLQNRYSRRRSRSRSISSSPERDRRRLSRSRSKERSRRSRT
PDRFRRSRSRERRRSRSPFRRHYRRSRSPRRRPRSRERRSRSRDKQSDSHDRGKCSHLTS
RDSLKKGIEVEEKKSDEALKGTFEKFDQLDKEAQQKELELEMQRRRERIEKWRAERKKKD
IEEGGGSQTLIVMPPSKKWSLEDDEDEEPPSESGNKEDIEEEEVDPLDAFMQGIQEDVRQ
MHNKGVKKDTDTEEKQSKVTVIMGVAKKQSNTRKGELIEQDQDALEYSSEEEGEDLQTAM
SDLQANKTKKMVTISRDDISYMPFRKNFYVEVPELAKMTQEEVEIYRAEMEGIQVRGKTC
PKPIKTWAHCGVSKKVLEVLKKHNYEKPTPIQAQAIPVIMSGRDVIGIAKTGSGKTVAFL
LPMLRHILDQHPLEAEDGPIGIVMTPTRELAMQITKECKKFTKSLGLRAVCVYGGTGISE
QIAELKRGAEVIVCTPGRMIDMLAANSGRVTNLRRCTYVVLDEADRMFDMGFEPQVMRII
DSTRPDRQTVMFSATFPRQMEALARRVLTKPVEVQVGGRSVVCKDVEQHVVVLEDEEKFL
KLLELLGVYQEEGSCLVFVDKQEHADMLLRDLIKASYNCHALHGGIDQFDRDSTICDFKA
GKISVLIATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGKKGYAYTFITPDQ
GRYACDIIRALELSGNPVPANVQELWEMYKVKQEAEGKKVKSSSGFSGKGFKFDEAEAQL
ANEKKKFQKAALGLQDSDDEDAEADIDQEIETLLAPKKRVKEVTMAQLAQITTAGNLSTI
TGPSAGSAEKLELAKRLASRINLQKNFGLDPKGATQQATEAVLKGQMSTPLISAKTLAEQ
RAEKLHAKLNYQPKAEDEDKDEEQLEAETFKKYEEELEINDFPQQARWKVTSKEALAQIS
EYSEAGITVRGSYYPPGKDPKDGDRKLYLAIESTNELAVAKAKSEIVRLIKEELIKMQNS
YQPINKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagacaggaatgctttactagaatgtaggaagacaaaaatgtgttatcgaaat
ctacaaaacaggtattctcgaaggcgttcaaggtctcgaagtatatcaagcagtccagaa
cgagacagaagaagactaagtaggtcacgtagtaaggaacgatcccgacgttctagaacc
cctgataggtttcgacgctcacgttcaagagaaagaaggagaagtcgttcaccttttcga
cgacactacagaagatcacgatcaccccgacgccgtcccagatccagagagcgacgatct
cgtagtagggataaacaatcagatagtcatgatcgaggcaaatgtagtcatttgaccagt
agagactctttgaaaaaaggaattgaagttgaagaaaaaaaaagtgatgaagcactgaaa
ggaacttttgagaaatttgatcagttagataaggaagctcaacaaaaagaattagaatta
gaaatgcagaggagaagagaacgaatagagaagtggcgtgcagagcgtaaaaagaaagac
attgaagaaggtggtggaagtcaaacacttattgtaatgcccccaagtaaaaaatggtcc
ttagaggatgatgaagatgaggaaccaccttctgaatcaggtaacaaagaagatattgaa
gaggaagaggttgatccacttgatgcttttatgcagggaattcaagaagatgttcgtcag
atgcacaacaaaggtgtgaaaaaagatacagacactgaggaaaaacaaagtaaagttaca
gttattatgggggtggccaagaaacagagtaacacaagaaaaggtgaattgattgaacaa
gatcaagatgccttagagtattcttcagaagaagaaggggaagatttgcaaactgcaatg
tctgacttacaagcaaataaaacaaaaaaaatggtcacaatctccagagatgatatttct
tacatgccattccgtaagaatttttatgttgaggttccagaacttgcaaaaatgactcaa
gaagaggtggaaatatatcgagcagaaatggagggtatccaagtgagggggaagacttgc
cctaaacctattaagacctgggctcactgtggtgtcagcaagaaagttttagaagtacta
aaaaaacataactatgaaaaaccaacaccaattcaagcacaagctattccagttattatg
tctggacgagatgttattggaatagcaaaaactggatctggcaaaactgtggcattccta
ttaccaatgttacgtcatattcttgatcagcatccattagaagctgaagatggaccaata
ggaatagtaatgacgcccaccagagaacttgctatgcaaataacaaaagaatgtaaaaag
ttcacaaaaagtttgggactacgtgctgtgtgtgtttatggaggcacaggtatctcggaa
cagattgctgaactaaaacgaggtgctgaggttatagtttgtacccctggtcgaatgatt
gacatgttagctgcaaatagtggaagagtaactaatctgagacgctgtacatatgtggta
ttggatgaagctgatcgtatgtttgacatgggatttgagcctcaggtcatgagaataatt
gatagtacccgtccagatcggcagactgtgatgttttcagcaacatttccacgacaaatg
gaagctctggctcgccgtgtgctaactaaaccagttgaagtacaagttggtggacgtagt
gttgtttgtaaagatgttgaacaacacgttgtggttcttgaagatgaagagaagtttcta
aaactgttagagttattgggtgtttaccaggaagaaggcagttgtttagtctttgttgac
aaacaagaacatgctgatatgcttctacgtgacctcatcaaggcatcatacaattgccat
gctcttcatggtggtattgaccagtttgatagggactccaccatctgtgattttaaagct
ggaaagattagtgttctgattgctacatctgtggctgcaagaggattggatgtcaaacat
ttaatactagtcgtaaactacgattgtcctaaccactatgaagactatgttcatagatgt
gggcgtacaggacgggcaggaaagaaaggctatgcttatacattcatcactccagatcag
ggtcgttatgcttgtgatattatcagggctttagaactgtctggtaacccagttccagct
aatgttcaggaactctgggagatgtataaagtcaaacaggaagcagaaggaaagaaagta
aaaagcagtagtgggttctcaggtaaagggttcaaatttgatgaggcagaagcacagttg
gccaatgaaaagaagaaatttcaaaaagcagctttaggtctacaagattctgatgatgag
gatgcagaagctgatattgaccaagaaattgaaacattactggcaccaaagaaaagagtg
aaggaagtcaccatggctcagctagcccagataacaacagctggtaatttatcaacaatc
actgggccctctgctggcagtgcagaaaagctagaactggctaaacgtcttgcatctcgc
atcaatcttcagaagaattttggtttggatcctaaaggtgcaacacagcaagctactgag
gctgttcttaaaggacaaatgtcaactccgctcatatctgccaaaactctggcagaacaa
cgagctgaaaaactccatgccaaactcaattaccagcctaaagctgaagatgaagataag
gatgaggagcagttagaagcagaaaccttcaagaaatatgaagaagaattagagataaat
gattttcctcaacaggctagatggaaagttacatcaaaggaagctctagcacaaattagt
gagtattctgaagcaggaattactgttcgaggctcctactacccacctggaaaagatcca
aaagatggtgaccgcaaactctatctggcaattgaaagcactaatgaacttgcagtggct
aaagctaagtctgaaattgtacgtctcatcaaagaagaactcatcaaaatgcaaaactct
taccagccgatcaacaagggccgctacaaagttttatag
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