Limulus polyphemus (Atlantic horseshoe crab): 106465821
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Entry
106465821 CDS
T08968
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Endostatin
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
106465821
NCBI-ProteinID:
XP_013781510
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MVLQNTISVYFQCEEFGKSIVTRIPEGLRFDPASTLYIGQAGPLLGGYFVGTLQELRLNS
NPYLAEVYCQEIFEDIGSGGFNNYHEDIEPRPVSEDDEGYIPISSGESDLDKEEGTKHHR
GPPPLPSPPPPPLSGFEGGYSILEPSYGPVSAIPGPKGEKGEPGDEGQPGIKGEQGTIPE
DFYSKYALPGQKGERGIPGPVGPKGEKGDSVIGPVGPPGPPGLPAPIPPTDSWFDIEPKE
GPPGLQGPPGPPGECVCDTSLFNITGPPGKDGFPGPPGQDGKAGEPGLRGLPGIPGEQGI
QGAVGMKGDKGDQGFSGPQGPPGQKGEPGLNGTPGTPGPRGLPGPPGPPSHGRGSIFGLD
GSGYSSGWFGSGEEPLGPFSGQPGPRGPSGLPGVPGSPGIKGERGFHGEKGDQGLKGDVG
PVGPKGLKGEQGLPGLDGLPGLIGDRGPHGIKGGKGDIGPPGPPSPSVEGKEIVPVAGPP
GPKGEKGDQGLKGAEGPPGLPGLYGLKGEPGNRGLPGELGPVGPPGKIGPPGLPGPPGVT
EVVTVDGVAKVIGEKGDVGLRGRRGRRGPPGPPGPPGSIGPIGEIGFPGFPGKPGPPGVP
GQKGSTGIGLKGQKGERGEPGQLSFEEGEVEGLKFLKVPGPKGEKGSQGDPGVRGPLGPE
GPVGALGPRGFSGIPGKSGSKGEKGEPGPPGLPSTGEVEFIPVPGPPGPPGPPGIPGETV
EGLPGPSGVGLPGPPGPPGPPGLPGSEFFRTSNSINDQSVQYIPGPPGPPGPPGPPGDEG
KEKKDHLAVVPGAVTFKNMESLLRMSDISPIGTLGFVLDEEALLVRVSRGWQYVGLGSLV
PLPLATTTTSTTTAPLSPPVDSLTLEKAPRLRIAALNQPYTGDMHGVRGADYECYRQSRK
ANLRGTFRAFLASRVQNVNSLVHYMARDLPIVNIKGEVLFNSWRDIFTGAGAVFPYPPRI
YSFDGRNVLADNTWTQKIVWHGSDKHGIRDMEGFCDAWNSNSLKKVGVASSLLRHRLLDQ
EKYSCNNAFIVLCMEAMSQQELQHRKKRETGRDFTEEEYSELINTLEQENLLEDIEQ
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggtccttcagaacactattagcgtctactttcagtgtgaggaatttggaaagagtatc
gtaacacggattccggaaggactcagatttgatccggcttccactctctacatcggtcaa
gcagggcccctgctgggtggttactttgtggggacgttgcaagaactgagactgaacagc
aatccctacctggcagaagtttactgtcaagaaatttttgaggatatcggcagtggaggc
ttcaataattatcatgaagacatagagccgaggcctgtgtctgaagatgacgaaggttat
ataccaatatcaagtggggaaagtgatttggataaggaggaagggacgaaacaccacagg
ggtccacctccattaccttcaccaccaccaccaccattatcaggttttgaaggaggatat
agtattttagaaccatcctatggtcctgtgtctgcaatacccggacctaaaggagagaaa
ggtgaacctggtgatgaaggacaacctggaatcaagggtgaacaaggcaccataccagag
gacttttattctaagtatgctttgccaggccaaaaaggagaaaggggcatacctgggcct
gtaggacccaagggtgagaagggagattcagttattggccctgttgggccaccaggacca
cctggattacctgctccaattccacccactgattcttggtttgatattgaacccaaagaa
ggacctcctggacttcaaggccctcctggaccaccaggtgaatgtgtctgtgatacttct
ttatttaacatcactggccctcctggtaaagatggttttccaggtccaccaggacaagat
ggtaaggctggtgagcctgggttaagaggattacctggcataccaggggagcagggaata
caaggggctgttggtatgaagggtgataagggtgaccagggattttctggtccacaaggt
ccaccaggacagaaaggtgaacctggacttaatggtaccccaggaactccaggaccacgt
ggactgccaggtccacctggacctccatcacatggtcgaggaagtatatttggtttagat
ggatctggatattcttctggatggtttggatcaggtgaggaacctcttggaccttttagt
ggtcaacctggacctcgtggaccctcaggtcttccaggggtcccaggatcacctggcata
aagggagaaagaggttttcatggtgaaaagggagatcaaggacttaaaggagatgtaggt
ccagttgggcctaagggactaaaaggagaacaaggtttaccaggacttgatggactacca
ggattaataggtgatcgtgggcctcatggaataaaaggaggaaagggtgatattggacct
cctggacctccctcaccttcagtagaaggaaaagaaatagtaccagtagctggtccacct
ggtcctaaaggagagaaaggagaccaaggacttaaaggagctgaaggtccacctggactt
cctggactctatggattaaagggagaaccaggaaacagaggattacctggggaacttgga
ccagttggaccacctggtaaaattgggccacctggacttcctggacctcctggtgtcact
gaagttgttactgtggatggagtggctaaagttattggagagaaaggtgatgttggtttg
cgtggaagacggggaagacgaggtcctccaggtccccctggccctcctggctcaattggt
ccaattggagaaataggattccctggatttccaggtaaacctggaccacctggagtgcca
ggccagaaaggaagcacaggtataggcttgaaagggcagaaaggagaaagaggagagcca
ggacaactatcatttgaagaaggagaagtagaagggttgaaattccttaaagttccaggt
cccaaaggagagaaaggcagtcaaggggacccaggagttcgtggaccacttggtcctgaa
ggtccagttggagctcttggaccacgaggttttagtggaataccaggaaaatctgggtca
aagggtgaaaaaggagaaccaggacctccaggattaccttcaaccggtgaagtggaattt
ataccagttccagggccaccaggacctcctggtccaccaggtataccaggagagaccgta
gagggccttccaggaccatctggtgttggtttgcccggaccaccaggtccacctgggcca
cctggactaccaggatctgaattctttcgaacatccaactctatcaatgatcaaagtgta
caatatatacctggtcctcctggcccacctgggcccccaggaccacctggagatgaagga
aaggaaaagaaagaccatttggctgttgttccaggggctgttactttcaagaacatggaa
tctctgcttcgaatgtcagatatcagtcccattggaacacttggatttgttcttgatgaa
gaagctttattagttcgtgttagcagaggttggcagtatgtgggattgggttctttggtt
ccactacccctggcaacaactactaccagtaccaccacagcacctctcagtccaccagtt
gacagcttgacacttgagaaagctcctaggttaaggatagcagcactgaatcagccttat
actggagatatgcatggtgtccgaggagctgattatgagtgctatcgacaatctagaaag
gctaacttacggggaactttccgagcttttcttgcctctagagttcaaaatgtgaatagc
ctcgtccattacatggctcgagatcttccaatagtaaatataaagggtgaagtgttattt
aactcttggagagatatctttactggagctggagcagttttcccatatcctccacggatt
tattcttttgatggaagaaatgtccttgcagacaatacatggacccaaaaaatagtttgg
catggctcagataaacatggaattcgtgacatggaaggcttctgtgatgcctggaattcc
aacagcctcaaaaaagtgggtgttgccagttctctactgcggcacagattactggatcaa
gagaagtactcctgcaacaatgctttcattgttctatgtatggaggccatgagtcagcaa
gagctccaacacagaaagaagcgagagacaggcagagatttcacggaagaagagtatagt
gaactgataaacacactagagcaagagaacctattggaagatatagaacagtaa
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integrated database retrieval system
