Limulus polyphemus (Atlantic horseshoe crab): 106466016
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Entry
106466016 CDS
T08968
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04382
Cornified envelope formation
lpol04512
ECM-receptor interaction
lpol04518
Integrin signaling
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106466016
04518 Integrin signaling
106466016
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106466016
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106466016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpol04147
]
106466016
00536 Glycosaminoglycan binding proteins [BR:
lpol00536
]
106466016
Exosome [BR:
lpol04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106466016
Glycosaminoglycan binding proteins [BR:
lpol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106466016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106466016
NCBI-ProteinID:
XP_022249683
UniProt:
A0ABM1T1C7
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MKLKNVFFYLFITGLYLLFSVKSSEAAACRGCHVQPCICVGEKGISGIVGLPGIPGPPGP
PGRMGEEGPYGPRGDRGERGESGAMGQQGIRGEQGTSGLTGPAGISGLPGDEGSQGKQGF
PGCNGTDGKPGQSGNPGIPGARGPPGPLGDYGMRGDPGDGGINSIGVKGESGEDGQPGTT
GHRGLSGLSGEKGVRGPPGILGMKGDQGEPGPKGPMGEGREGSKGRKGNRGYPGDMGLQG
PTGRVIPDPNIALFKQGMKGEPGEKGEKGAKGEVGFDGRPGEIGIFGAPGPKGEKGERGD
PGPRGKRGKDGPLGPLGVKGQKGQPGLTGEDGVPGVKGPPGEGGRLGSYGLQGPPGPPGP
TVPIGEPLPGSPGSQGPVGERGEPGNPGKPGNVGPVGYRGYPGIPGLQGPPGEPGPSGLS
FKGEPGEDGLSGKQGPFGRPGVPGLQGLVGDKGQLGNTVIGPPGEEGQPGWAGVPGLPGQ
RGDPGPPGPKGTPGIGVQKTGPPGQRGLPGPPGEPGSPGIPGKNGEPGFQGSKGDDCGFC
PPGPPGNTGDIGDDGRQGPDGPRGFPGFHGYSGRKGETGKPGIPGFRGAPGRPGSDGMEG
RKGSNGEAGELIYLGATKGTRGQPGEVGFPGVNGIPGAQGPPGPEGFRGFPGAKGQQGNF
GDDGFPGFDGLPGPPGLQGPKGKEGDVLYATKGFKGIHGEPGVDGLDGVMGEKGRKGEPF
SLEKLERKEEYLRFRGSKGDRGIPGLKGKRGIVGPKGFTGLNGLDGRRGSPGRNGTYPRG
ETGRKGYPGIDGDNGLPGIPGFPGIRGLQGPDGPPGLKGMQGSPGDEGIEGPRGLRGPPG
RQGDQGDYGTSGFYGQSGESGQVGDPGPKGSPGQEGFPGLKGEKGIPGVAGIGTVGAPGK
PGLRGFDGPRGQKGFKGPPGQVGISGEKGIIGMSGDRGISGVPGQDGVPGTPGIPGIDGL
PGLIGMSGEPGEPGPPGKSGIPGQPGLQGVPGFKGKQGESGYAGYQGQQGLPGFRGEVGE
PGPQGPEGLPGESASLGQKGDFGEPGLLGRRGRPGPSGLPGKPGPKGERGISGEALGAEF
GPKGEVGDQGFRGVAGYPGPKGHMGGLGAPGYDGVKGDKGYKGFPGSPGRDGFSGRLGPK
GRSGLPGFSGIPGPKGERGLVGIPGLKGLVGDEGPPGRPGSDGYKGQFGDSGEPGQPGLP
STEVNRGDRGEPGSPGLPGFPGERGESGLSGKPGSKGEQGDLGFEGSPGIAGRDGPKGYP
GEPGGVGEEGKPGYP
NT seq
3826 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaaaacgtatttttttacctgtttatcacaggtttatatcttcttttctcg
gtcaagtccagtgaggctgcggcttgtagagggtgtcacgttcagccatgcatttgcgtt
ggagaaaaaggaatttctggtattgtaggccttccaggaatcccaggtccaccaggacca
ccaggtcgtatgggtgaggaaggaccttatggtccaaggggtgatcgtggagaaagagga
gagagtggagctatgggtcagcagggcattaggggtgaacaaggcacttcaggactcacc
gggcctgctggtatttcaggtttacctggagatgaaggatcacaaggaaagcaaggattt
ccaggatgtaatggaacagatggaaagcctggccaatcaggaaatccaggaatccctggt
gcaaggggcccacctggtccacttggagattatggaatgaggggggatccaggagatgga
ggaattaattctataggagttaaaggtgaatctggtgaagatggtcaacctggaactaca
ggccatcgtggactatcaggtctaagtggagaaaagggagttcgtggccctcctggaatt
ctaggaatgaaaggtgatcaaggagaaccagggcctaaggggcctatgggagaaggtagg
gaaggatccaaaggacgaaagggcaacaggggttatccaggagacatgggactgcaagga
ccaacagggagagtgattccagatcctaatattgcactgtttaagcaaggaatgaaaggt
gaaccaggtgaaaagggtgagaaaggtgcaaaaggagaagtaggctttgatggaagacca
ggagaaattgggatttttggtgcacctggtcctaaaggagagaagggagaaagaggagac
ccaggcccaagaggaaaaagaggcaaggatggccctctaggaccactaggagtgaaaggt
cagaaaggtcagccagggcttacaggagaggatggtgtacctggtgtaaagggtccacct
ggtgaaggtggaagacttggaagctatggtcttcagggtccacctggtccacctggacca
actgtaccaattggtgaacctcttcctggttcaccaggttctcagggtccagtgggtgaa
aggggtgagccaggaaatccaggaaaacctggaaatgttggacctgtgggatatcggggc
tatcctggaataccaggtctccaaggtcccccaggtgaaccaggtccatcaggacttagc
ttcaaaggagaacctggagaagatggactttcaggaaaacaaggtccatttggaagacct
ggtgtaccaggattacaaggtctagttggtgataaaggtcagcttggaaacactgtcatt
ggtccaccaggggaagagggacaacctggttgggctggagttccaggacttcctggccaa
cgaggtgatccaggccctccaggaccaaaaggtacccctggaattggtgttcagaaaact
ggaccacctggtcagcgtggacttccaggtcctcctggagaaccaggatctcctgggatt
ccaggtaaaaatggtgagccaggatttcagggatctaaaggggatgactgtggtttttgt
ccaccaggaccgccaggcaatactggagatattggggatgatggacgccagggacctgat
ggcccaagaggttttccaggatttcatggatattcaggtagaaaaggggaaactggaaag
ccaggtatacctggttttagaggagctccaggtcgaccagggtctgatggtatggaagga
agaaaaggctctaacggtgaagctggagagttgatatatctaggagctacaaaaggaaca
agaggacaacctggagaggttggtttccctggggttaatggaatcccaggagcacaagga
ccaccaggtccagaaggttttagagggtttcctggagccaaaggacagcagggaaacttt
ggagatgatggattccctggttttgatggtcttcctggacctccaggtcttcagggacct
aaagggaaagaaggggatgttctttatgctactaaaggttttaaaggaattcatggtgaa
cctggtgttgatggccttgatggtgtaatgggagaaaagggtagaaaaggagaacccttt
tctttggaaaaactagagagaaaggaagaataccttcgctttagaggttctaagggtgat
cgtggtatacctggtttaaaaggaaagagaggaattgttggtccaaaaggcttcacgggg
ttgaatggcttagatggtcgtagaggatctcctggtagaaatggaacttaccctcgtgga
gaaacaggaaggaaaggatatccaggtatagatggtgataatgggctacctggaatccct
ggatttccaggaattagaggactacaaggtccagacggccctccagggttaaagggaatg
caagggtcacctggagatgagggaatagaaggccctcgtggtttacgtggacctcctggt
cggcaaggtgatcaaggggattatgggacatctggattttatggacagtctggtgaatct
ggccaagtaggagatccaggacctaagggctcacctgggcaggaaggattccctggtttg
aaaggagagaaaggaattcctggtgttgctggaattggtactgttggtgctccaggaaag
cctggactcagagggtttgatggtccaagaggacaaaaaggttttaagggacctccagga
caagttgggatttctggtgaaaaaggaataataggtatgtcaggagatagaggaatctct
ggtgtcccaggccaggatggtgtgccaggaacacctggaatccctggaatagatggatta
ccaggattaataggcatgagcggtgaacctggagaaccaggaccaccaggaaaatctgga
atacctggacagcctggactacagggagtaccaggcttcaaaggaaagcaaggagagtcg
gggtatgcaggatatcaaggacaacaaggtttaccaggatttagaggtgaagtaggagaa
cctgggccacaaggacctgaaggtctacctggagaatctgcatcacttggtcagaaaggt
gattttggagaacctggacttctaggtcgaagagggagaccaggaccttctggtttacca
ggaaagccaggacctaagggagaacgaggaatttcaggagaagctttaggagcagaattt
ggacctaagggagaagtaggagatcaaggttttagaggtgtagcaggatatcctggacct
aaaggacatatgggaggtttgggtgcaccagggtatgatggagtcaagggtgataaagga
tataaaggtttcccaggatctcctggacgtgatggcttttcaggacgtcttggtcctaaa
ggaagaagtggtctaccaggtttctctggtattccaggaccaaagggagaaagaggacta
gtgggtatacctggactaaaaggacttgtaggtgatgagggacctccgggaaggcctgga
tcagatggatataaaggtcaatttggagacagtggagaacccggacaaccaggtctcccc
tcaactgaagtcaacagaggtgaccgtggtgaacctggatctccagggcttcctgggttt
cctggagagaggggagaatctgggctttcgggaaaacctgggtcaaaaggggaacaagga
gatcttggatttgaaggctctcctggaattgctggaagagatggaccaaaaggttatcca
ggagaacctggtggagttggtgaagaaggaaaaccaggttatccag
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integrated database retrieval system
