Limulus polyphemus (Atlantic horseshoe crab): 106467037
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Entry
106467037 CDS
T08968
Name
(RefSeq) mRNA-decapping enzyme 1B-like isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106467037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106467037
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106467037
mRNA degradation factors
5'-3' decay
Decapping complex
106467037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
106467037
NCBI-ProteinID:
XP_013782800
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MAAFAGEKRMNLAALQRVDPLIHRIIGSATQVALYCFNSEMRKWERTETEGALFVYIRSQ
PPKHGFVIMNRLNTTNLVEPITTEMEFQLQNPFLLYHNTRGIIYGIWFYERNECLQIAHL
LMRLAQPPIPNNQEQLSLKHQKAQPTEELSLGRGKKIQPNQQPPHSKGQSRENCLLNRGE
EQNQKPGKIIDIVSLLSHAQDGYNKNKMKNQRVKTRPDAITDVSHKTHPDSSAHSEIIKP
VAIRGTPTSNTVVSQGLSVPVTTSLSVASLFASANKTLQQMSPFHDPVNSKNPPSVIPIL
KKSQSTEGLDGIESDKLAENNSATILQRLMSNPANILEHIEREQRKEASGSYTPRTRATS
CSGDLGLPNSNVMLEKSSSLHTSASAQSLEQDLKEKLKLIPKCKTEDAVNKVSQSVSPVF
NMSPVSSAFTSFESTTNQPKITETVPVNTSSASVSLLTPVMFEQNLKYSPPQVPVSQLPV
SSTVETSVLYNDSFSTALLSQPPSMMRPPPASELPLLSPMDFCNVQSIPVLAVDGRSSKP
VHTSSKPINGSGNIEDPVLLLPNHFTQGASSPKKFDDLDELPQNVSVLTRDQLRGALMHL
LKKDTDFVNKLHDAYVTSLKTHFSSTGS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttgctggagaaaagagaatgaatctcgctgctttacaaagagttgatcct
ttgattcacagaataataggcagtgctactcaagttgcattgtattgttttaattcagaa
atgaggaaatgggaaagaactgaaacagaaggtgctttgtttgtttatatcaggtcacaa
ccaccaaagcatgggtttgtcatcatgaataggctgaacaccaccaatttggtagaacca
atcacaacggaaatggaatttcaacttcagaatcctttccttttgtatcataacacaaga
ggtatcatatatggcatatggttctatgaaaggaatgagtgcttacaaatagcacatctc
ttgatgagattagctcagccacccatccctaataatcaggaacagttatctctgaagcat
cagaaagctcagcctacagaagaactttcccttggcagaggtaaaaaaattcaacctaat
caacaacctccccacagtaagggtcaatcaagagaaaattgtctccttaacagaggagaa
gaacagaatcaaaagccaggcaaaattattgacatagtatctcttttgagtcatgctcag
gatggatataacaagaacaaaatgaaaaaccaaagagtaaaaacacggcctgatgcaatc
acagatgtatcccataaaacccaccctgacagttctgcacactcagaaattatcaagcct
gtggctatcaggggaacaccaacatctaacactgtagtttctcaagggctatcagtacca
gttactacttctttaagtgtggcttctctctttgcttctgctaataaaacactgcagcaa
atgtctcctttccatgatccagtgaactccaagaatcctccaagtgtcatcccaatacta
aaaaaatcccagtctacagaagggctggatggcatagaatctgataagttggcagagaac
aattcagctaccattctacaacgtctcatgtccaatccagccaatatacttgaacacatt
gaacgagaacagaggaaggaggcttctgggtcatatactccacggacaagagccacttct
tgctctggggacttaggacttccaaattcaaatgtcatgttagaaaaatccagctctttg
cacacctcagcttcagctcagagtcttgaacaagacttgaaggagaaattaaaactcatt
ccaaagtgtaaaacagaagatgcagtaaacaaagtcagtcagtctgtttctcctgtgttt
aacatgagcccagtttcttcagcatttacttcttttgaatcaacaactaaccagccaaaa
atcacagagactgttccagtaaatacaagttcagcttctgtttctcttcttactccagtt
atgtttgaacaaaatttgaagtactctccaccccaggttcctgttagccaacttccagtc
agctctactgtagaaactagtgttttatacaacgactccttttcaactgcattgttgtct
cagccgccatcgatgatgagaccaccaccagcttcagaacttccgctcctgtctcctatg
gacttctgtaatgttcagtctattcctgtccttgcagttgatgggcgtagcagcaaacct
gtgcatactagtagtaaaccaataaatggatcagggaatattgaagatccagttcttctg
cttccaaatcatttcacacagggagcgagcagccccaaaaaatttgatgatctggatgag
ttaccacaaaatgttagtgttttaactcgagaccagctaagaggggcattgatgcacttg
ttaaaaaaggatactgattttgttaacaaactccacgatgcatatgttacgagtttaaaa
acacacttcagttcaactggatcctga
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