Limulus polyphemus (Atlantic horseshoe crab): 106467410
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Entry
106467410 CDS
T08968
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03420
Nucleotide excision repair
lpol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106467410
09124 Replication and repair
03420 Nucleotide excision repair
106467410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpol04121
]
106467410
03400 DNA repair and recombination proteins [BR:
lpol03400
]
106467410
Ubiquitin system [BR:
lpol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106467410
DNA repair and recombination proteins [BR:
lpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
106467410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
106467410
NCBI-ProteinID:
XP_013783213
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAMLSFLHQVWNGSVRPTSLIQAEATRRLLSLELSKLRDVEQAHTSSVNSIDIENIENRY
LLSGGADGTICIHELDNYSGTPQYTCKVICKVSRRSRHAHKFSVESVQWYPFDTGLFTSG
SMDCQLKVWDTNTLKPAEVFTMPGKIYSHSLSSVATHHSLIAVATSHSRVTLVDMRTGGC
SHELRGHKSSVLSIQWSPVAETLLATGSKDNRLLLWDIRSAKGHLCAFDQHNGEAVAAGY
SGKTAHDGTVSGLSFTQDGLFLVSCGTDDRVRLWDVALGRNSLVNFGKVVNDSCKTVKMA
VTQSCDPPLVFVPSEGRVLVYSLVTGELFDTLIGHFNLVNCCALRQPHHELYSGGNDRNI
LIWIPDSDQEVCYEDYTRTAMKSKEATSKHTNNLRVDNWSSDED
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctatgttaagctttcttcatcaagtgtggaatggttcagtaagaccaacttccttg
attcaagctgaagctacacgtcgactactgtccttggaactgagcaaactacgggatgtt
gaacaagcccacacatcaagtgtaaactccatagatattgaaaatattgaaaacagatac
ttgttgtcaggaggagcagatggaactatctgtatacatgagttagataattacagtgga
acaccccaatatacatgcaaggttatttgtaaagtcagtaggagatcaagacatgcacac
aaatttagtgtagaaagtgtacagtggtacccttttgacacaggattattcacgtcagga
agtatggactgccagctgaaagtgtgggacacaaacacactcaagcctgctgaggttttt
accatgccaggaaaaatttattcccattctttatcatctgttgctacccatcattcactg
atagctgtggccacatctcattccagagtgacacttgtagacatgagaaccggagggtgc
tcacatgaacttcgtggccacaaaagtagtgttttatcaatccagtggtcacctgtggct
gaaacattgctggcaacgggaagcaaagataatcgtcttcttctatgggacattcgatca
gcaaagggacacctgtgtgcttttgaccaacacaatggagaggctgttgctgcaggctac
agtggaaagactgcacatgatggaactgtgagtggattaagttttactcaagatggcttg
tttctggtgtcttgtggtactgatgaccgagtacggctctgggatgttgctttgggccga
aatagtctagtcaattttggaaaggtagtgaatgacagctgtaaaacagtgaaaatggct
gtaactcaaagctgtgatcctccacttgtgtttgtaccatcagaagggagggtcttagtg
tacagtttagttactggagaactttttgataccttaataggacatttcaatcttgtgaac
tgctgtgcactacgtcagcctcaccatgaactttacagtggtggcaatgacagaaacatc
cttatctggataccagattctgatcaggaagtttgttatgaggattatactaggactgct
atgaaaagtaaagaagccacttccaaacatacaaataatcttcgggttgataattggagt
agtgatgaagattag
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