Limulus polyphemus (Atlantic horseshoe crab): 106467771
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Entry
106467771 CDS
T08968
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106467771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106467771
03012 Translation factors [BR:
lpol03012
]
106467771
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106467771
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106467771
Translation factors [BR:
lpol03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106467771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
RD3
Motif
Other DBs
NCBI-GeneID:
106467771
NCBI-ProteinID:
XP_022251673
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MSKLPREKGSILYCTTGILLQRMQNDPYLSKISHIILDEIHERDLDSEFLIIILKDLLKQ
RQDLKVILMSATLNAEQFSQYFGNCPMLNIPGFTFPVKEYLLEDVLEMIRYEPKFNRKNS
QENMTPWKRHTKQGKKLMEKERERQEAMGCYLRTLEGSYSSQTIKTLWDIDEETIDLNLI
FSLLRYICIKQGEGAVLVFLPGWEHISKLHKIINDDSMFNSSRYLIIPLHSLMPTVNQKA
VFNRPPPGVRKIILATNIAETRVQEGICYHLYSKLTESQLQNYQLPEILRTRLETLCLRI
KILKLGKIEVFLNKAMQPPDPKALELSINLLEKLNALDEKENLTPLGFHLAQLPLDPHTG
KMILMGAIFSCLDPILTVAASLSFKDAFVIPLGKEEQADQKRKQIARNSKSDHLMLVQAF
QWLGSCYEERLRSALLLGKFFITYHATAMADVLDNKRVWIILGAAPFRKKPTTSCTSVMM
LANLKKQFTQYLHELQFLHCDDPKHKDFNRNSENQMLLKAVICAGLYPNVAKLQWRHNRN
PHKSPKIPKVYTEDDGKVVLHPKSVNYMEFNFHSQWLVYYQKLRSSKVFLHDTTNVQPFS
LLFFGGRITFGKDLSCSTVFVDKHIAFHCPPRVAHLVKELREELDKLLQHKANHPGVTCW
DPSTKEGALLKAIVELITSEDPLQSVEHTRQDDDYDDDED
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattaccaagagaaaagggatctatcttatattgtacaactggaatcttactt
cagagaatgcaaaatgatccatatttgtcaaaaatttctcacattattttggatgaaata
cacgaacgggatttagactctgaattcttgataataattttgaaagacctactaaaacaa
cgacaagatttgaaagtcatactcatgagtgcaacgttgaatgcagagcaattctcccaa
tattttggaaactgtcccatgctgaatattccaggttttacttttcctgtgaaagagtat
ctattggaggatgttttagaaatgattagatatgaaccaaagttcaatagaaaaaattct
caagaaaacatgactccttggaaaagacatacaaaacaaggcaagaagctgatggagaaa
gaaagagaacgtcaagaggccatgggttgttatcttcgtacgttggaaggcagttattct
tcacaaacaataaaaaccctgtgggacatagatgaagaaactattgacttaaacttaatt
ttcagccttttgagatacatttgtataaaacaaggggaaggagcagtattggtattttta
cctggctgggaacatattagtaagcttcacaagattatcaatgatgactctatgttcaac
tcatcgaggtacttgattattcctctccactcccttatgcctactgttaatcaaaaagca
gttttcaacagacctccacctggtgttagaaagataattttggctacaaacattgctgaa
actagggttcaagaaggaatatgttaccatctatactccaagcttacggaatcacagctg
caaaactatcaacttcctgagattttgagaacaagactggaaactttatgtttgagaata
aagatactaaaattaggaaaaattgaagtattcttgaataaagcaatgcagcctcctgat
ccaaaagctttggaactgtctattaatttactagaaaaactgaatgccttagatgaaaaa
gagaatctcacaccactgggattccatctagctcagcttcctctggaccctcacacggga
aagatgattctgatgggagctatcttctcttgtcttgatcccattcttactgttgctgcc
agccttagctttaaagatgcatttgttatacccctgggaaaagaagaacaagctgaccag
aaacgtaaacaaatagcacgaaactcaaaaagtgaccatctcatgcttgtgcaggccttt
caatggttgggaagctgctatgaagagaggctacgatcagcgctactgttgggaaaattt
tttatcacatatcatgcaactgccatggctgatgtgttggataacaaaagagtatggatc
atcttgggggcagcaccattcagaaagaagcctacaacaagttgtacctcagttatgatg
ttggcaaatttgaagaaacagtttactcagtatcttcatgaacttcaatttcttcactgc
gatgatcctaaacataaagatttcaacagaaattcagagaatcagatgctattaaaagct
gtcatctgtgctggactctaccctaatgtggccaaactgcaatggcgtcataacaggaat
ccccataaaagcccaaaaattcccaaagtgtacacagaggatgatgggaaggttgtttta
catcccaagtctgtcaactacatggaattcaactttcatagtcagtggctagtgtattat
caaaaactcagaagttcaaaggttttcctacacgatacaaccaacgttcaacctttctca
ttgttgttttttggtgggcggatcacgtttggcaaggatctgtcatgcagcactgtattt
gtagacaaacatattgcttttcactgtcctcctagggtggctcatcttgtaaaggagctg
cgggaagaactggacaagcttcttcagcacaaagccaaccatcccggagttacttgttgg
gatccaagtaccaaagaaggagcattacttaaagctattgttgaactcatcacctcggag
gatcctcttcaatctgttgaacacaccagacaagatgatgattatgatgatgatgaagac
tga
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