Limulus polyphemus (Atlantic horseshoe crab): 106469289
Help
Entry
106469289 CDS
T08968
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106469289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpol03021
]
106469289
03036 Chromosome and associated proteins [BR:
lpol03036
]
106469289
Transcription machinery [BR:
lpol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106469289
Coactivators
SAGA/TFTC/STAGA complex
106469289
Chromosome and associated proteins [BR:
lpol03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106469289
STAGA complex
106469289
TFTC complex
106469289
SAGA complex
106469289
SLIK complex
106469289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR19_1st
WDR54
HisK-N-like
Motif
Other DBs
NCBI-GeneID:
106469289
NCBI-ProteinID:
XP_013785229
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAEAVMDSHSLVNATNESELQNEIITVEGGNEASTDQRSAESQQPDVDKNALLAVLQFLK
KYNLQETEGILRKETKLLDDHLPTSSQSSSDVTSVLSSFKSEGDPDIYEDAYTVLKKLVE
SSLDTYKYELSMILYPVFVRMYLELVYNDHEIQAVGFMAKFGPEQEEYYQDDIQKLASVT
KKDHMKRNELMDNFKSEQFTLRMSRDTYNYLKRQLQNRKNSLLHNIIQEHLYFDVYEGMA
RNKQQVDATAGAVLGEATRQANNTKVYYGLLKEPELPLPVDDEEESGEGEDKPKKKKPKK
DPMLSKKARNDPNAPPNNRIPLPELRDADKLDKSNALREAKKGLKLGTEILPSVCFYTLL
NSHLGVTCVEIAEDSSLLAAGFVDAAVRVWSITPNSLKAMKPASELEQTDKEADDVLYRM
MDESNATNMRLLLGHNGPVYSTSFSPDRNLLLSCSEDGTIRLWSLLTWTNVVCYKGHCFP
VWDVQFSPHGYYFASCGHDRTARLWATDSHQPLRVFAGHVCDVDCVQFHPNSNYIATGSS
DRTVRLWDVSNGNCVRYMTGHKGRIYTLVFSNCGRFLASAGGDKKILVWDIATGHLVAEL
NNHSEALYSLCFSRDGTILASGGLDYCVKLWDFTKLSEELDLEDLNISHTPNVKTNTESY
LLGSYRTKSTSVLSLHFTRRNLLLGTGMYQG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggtgatggattcacattcactcgtcaacgcaacaaatgagtctgaatta
caaaatgagattattactgttgaaggaggaaacgaagcatcgactgaccaaagaagtgct
gaaagtcagcagcctgacgtggataaaaatgcattgcttgctgtacttcagttcttaaaa
aaatataaccttcaggaaacagagggtattttacgcaaagaaaccaagttactagatgac
catttacctacatcttcacaatccagttcagatgtgacaagtgtattgtcctcatttaaa
agtgaaggagatccagatatatatgaagatgcatacacagttttgaaaaaattagttgaa
tcatcactagacacttacaagtatgaattatctatgattctgtacccagtttttgtacgg
atgtaccttgaactggtatataatgaccatgaaatacaagctgttggttttatggcaaaa
tttggaccagaacaagaagagtattaccaagatgacattcagaaattagcctcagttacc
aaaaaagaccacatgaaacgaaatgaacttatggataatttcaagtcagaacaattcaca
ttgagaatgtccagagacacatacaattatttaaagagacagttgcaaaacagaaaaaac
agtcttctccacaatataatacaagaacatctgtattttgatgtttacgaaggcatggcc
agaaataaacaacaagtagatgctacggctggagcagttttaggtgaagctacaagacaa
gcaaacaacacaaaagtatactatggtcttctaaaagaacctgagctacctttacctgtt
gatgatgaagaagagtctggtgaaggagaagataaaccgaagaaaaagaaacctaaaaag
gatcctatgctgtctaagaaggcccgaaatgaccctaatgctcctccaaataacaggatt
cctttaccggaattgagagatgctgacaaattggacaagtccaatgctctacgagaagcc
aagaagggactaaaacttgggactgaaatattaccctctgtttgtttctatactttgcta
aactctcatctaggagttacatgtgtggagatagctgaagactctagtcttttggcagct
ggatttgttgatgcagctgttcgtgtctggtccataactcccaactctctgaaggccatg
aaaccagcttcagaacttgaacagacagacaaagaagcagatgacgtgttgtacaggatg
atggatgaatccaatgcaacaaacatgagattgctcctaggacacaatggtcctgtatac
tctaccagtttcagccctgataggaatcttctcctttcatgctctgaggatggtacaatt
cgattgtggagtctactaacatggaccaacgttgtttgttataaaggtcattgttttcct
gtgtgggatgttcagttcagcccccatggttattattttgcatcctgcggtcatgacaga
acagcaaggttgtgggcgactgactctcatcagcctttaagggtttttgctggacatgtt
tgtgatgttgattgtgtacagttccatcccaactctaactacattgccactgggtccagt
gacagaactgtacggttatgggatgtttctaatggtaattgcgtccgctatatgacagga
cacaagggaagaatctacacactggttttctccaattgtggacgattccttgcttcagca
ggtggtgacaagaagatactagtttgggatatagctactggacacctagtggcagaatta
aacaaccattcagaagctttgtattcgctttgttttagtcgagatgggacaattctcgca
tcaggaggcttagactattgtgtaaagctttgggattttaccaaactgagtgaagaactg
gatttggaagatttaaacatatcccatacacctaatgtcaagacaaacacagagagctat
ctgttaggcagttacaggactaaatctacttcagttttatcacttcacttcaccagaaga
aatctcctcctgggaacaggcatgtaccagggttaa
DBGET
integrated database retrieval system
