Limulus polyphemus (Atlantic horseshoe crab): 106469669
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Entry
106469669 CDS
T08968
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106469669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106469669
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106469669
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_1
ANAPC3
TPR_8
Motif
Other DBs
NCBI-GeneID:
106469669
NCBI-ProteinID:
XP_022254843
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MSDSTKENANESNKLSLPESCFILPPVTEQEKELAANALQEFENKNYEKCKSILSKLSQT
RSGDPKILHNLAVVEYYQSEFRNTDELRKKMKEVCDKAQVNIDNVDGLDDVDHCVIFFNE
AVILYHSHQYNAALNIMDKLFQFIEPLGLSGFDDQLAIKTCLLLLELYLCVNQPEKAARP
IAYLENMLYGNNKTSNNGSKAQTPEKEKEREGSKEKEVKEKKETTDSNFYDIYKPKLQQY
KARFYLMLKSTKACKRELKTLMSTGVSVSGVYLRSQLEYLRSNCRKAMKLLNTASVSGGT
HTFKETGDNIAAMYYNNMGCLHFYMGKPNLGCFYFNKAIQEHNNAIKSLTEGEPDTLSSR
PLFTVDVTAYYQLMYNLGLQYLHAGKPLQAFERLLEAVQVYHTNPRLWLRLAECCMQNHK
PDNSRDFSLKERQKDMIRGSVGSGPHRKIIMSPFISNDNKLSVQGQFSAIPMPTLEFASL
CLRNALILIPEAPSPSSSTSTTVSSQGGSIEEPEGTSPVEGQHVTVNGLPANSIQGAEVA
NLKNSILVASAYVALCLGDMVMALKHAETLLNQPRISGAHKFLAHLYAAEASIMMDNISD
AIQYLSPDTLTDISFTLPPTLDSIMLLIFSLYISYFLPLGWYPNTLSTAKVLMQYHLTVA
YAIRGELDKAGENLSQVGISKGPGTDIPVQAVMLAIYIQLQKGLPNLAKSIIKQYLPQYR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcaaccaaagaaaatgcaaatgaaagcaacaagctgtctttaccagagtcg
tgttttattttacctcctgtgacagaacaagagaaagaacttgctgctaatgctcttcaa
gaatttgaaaacaaaaactatgaaaagtgtaagagtatcttgagcaaattgtctcagact
cgttcaggtgatcctaagattctccataacctagcagttgttgagtattaccagtcggaa
tttagaaataccgatgaacttcgaaaaaaaatgaaagaggtttgtgacaaggctcaagta
aacattgacaatgttgatggactagatgatgttgaccactgtgtaatttttttcaatgaa
gctgtgattttgtaccattcccatcaatacaatgctgctcttaacatcatggacaagttg
tttcagtttattgaacctttaggtctctctggatttgatgatcagctagcaataaagact
tgcttgttacttctggagttgtatctgtgtgtcaatcagccagaaaaggctgcacgaccc
atagcctacctcgagaacatgctgtatggaaacaacaagactagtaacaatggaagtaag
gctcaaaccccggaaaaggagaaagaacgtgaaggcagcaaagagaaagaagttaaagag
aaaaaggaaacaacagattctaatttttatgacatttacaaacctaagctacaacagtac
aaagctcggttctacctcatgttaaagtccactaaagcatgtaagcgggaattaaaaacc
ttgatgagtactggagttagtgtatcaggcgtatatttgcgtagccagttggaatactta
cgaagtaactgtcgaaaggcgatgaaactgcttaacacggcttcagtgtctggaggtacc
cacacttttaaagaaactggagacaatatagcagctatgtattacaataatatgggctgt
ttgcatttctacatgggaaagcctaatttgggttgtttctatttcaataaagctatacaa
gaacataacaatgccattaaaagtttgactgaaggagaacctgatacactctcatcaagg
ccactgttcacagtggatgttactgcttactaccagctcatgtacaacctaggtctccag
tatcttcatgctggtaaaccactacaagctttcgaacgtttgttagaagctgtacaagtg
tatcacactaaccctcgactatggctacgtttagcagaatgttgtatgcagaaccataaa
ccagacaacagtcgagactttagtttaaaggagcgacagaaagatatgattcgtggaagc
gttggaagcggccctcatagaaaaattataatgtccccatttatttctaatgataacaaa
ttaagtgtccagggtcagttttctgctattccaatgccaaccttggaatttgcctctcta
tgcctacgtaatgcactcattcttattcctgaagctccttcaccctcttccagtaccagt
actacagtcagtagtcaggggggtagtattgaggaaccagagggtaccagtcccgtggaa
ggtcagcatgttacagttaatggactaccagcaaattctattcaaggagctgaagtagcc
aacttaaagaacagcatccttgtagctagtgcatatgttgcattatgtctgggagatatg
gtgatggccctgaaacatgctgaaacactccttaatcaacccaggatatctggagcccat
aagttcttagctcatctgtatgctgcagaagcatcaataatgatggacaatatctcagat
gctattcagtatctaagcccagatacattaacagatatctcttttacacttccacccact
ttggactcgattatgttacttatatttagcttgtatatctcttactttttacccctagga
tggtacccaaatactctgtctacagcaaaggttttaatgcagtaccatttaacagttgcc
tatgctatcagaggagaactagacaaagcaggagaaaatttaagtcaggttggaatttcc
aaaggtccaggaacagatatacctgtacaagctgtaatgttagccatttacatacagcta
caaaaaggactcccaaatctagcgaagtctattatcaaacagtaccttcctcagtatagg
tga
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