Limulus polyphemus (Atlantic horseshoe crab): 106469967
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Entry
106469967 CDS
T08968
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106469967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106469967
Spliceosome [BR:
lpol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106469967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
106469967
NCBI-ProteinID:
XP_013785940
UniProt:
A0ABM1BP49
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MSDDEEGTYVKKQKIVHYGSLEEKERERLLEKEKKSSDGEEEKSDSEEADDGNKTAVEAS
NINISEEYMDIEAEVNKEKQALLEEFERRKKARQINVSTDDAEVKATLRQLDEPICLFGE
GPADRRERLRQLLAKLGEDAVRKKKEEDQKQEEKEKEEETTWYHEGPESLKVARLWLAQY
SVPRAKERLQRAHLEAASDSQKKALRQELYKKLRTLNINCSQIGDTRPISFCQFSPNSNM
LVTASWXSIFDLWSEPSKLHTILGHNCSVGAIVFHPQATLTLPDDSCCMASCSSDGSVKL
WDLISEEPIADLEGHHPYRVSRLAFHPSGRFLATCVFDHSWRLWDLEAQEEVLHQEGHSK
PVYDISFQCDGSLAATGGMDAFGRVWDLRSGRCIMFMEGHLKSILAINFSPNGYQIATGS
EDNTVKIWDVRQRRCEYTIPAHTNLVSRVIFEKNNGHYLITTSYDNCLKVWAHPGWTPIQ
TLSGHDGKVMGADISPNGKYIATCSFDRTFKLWSPE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatgaggaaggaacatatgtgaagaaacagaagattgtacattatggcagt
ctggaggaaaaagaacgtgaaagacttttggagaaagaaaaaaagtcaagtgatggagaa
gaagagaagagtgattccgaagaagcagacgatggcaacaaaacagctgttgaagctagc
aacattaatatatctgaagaatatatggacattgaagcagaagtcaacaaagaaaagcag
gcacttttggaagagtttgaaagaagaaaaaaggcaagacaaatcaatgtatcaactgat
gatgctgaagtcaaagcaacattaaggcagctggatgagcccatttgtttatttggagaa
ggacctgcagatagacgagagcgtttaagacagcttctcgccaagttaggagaggatgct
gtcaggaaaaaaaaagaagaggatcagaaacaagaagaaaaggaaaaggaggaagaaaca
acatggtaccatgaaggaccagagagtttgaaggtggctaggctttggctagcacaatat
tctgtgcctcgggctaaagaaaggttacagcgagctcacctagaggcagcctcagattcc
cagaagaaagctttgcgacaagaattatataaaaaactcaggacgttaaacatcaactgc
agtcaaattggtgatacaagaccaatttctttctgtcagtttagtccaaactcaaatatg
ctggtgacagcctcatggtaaagtatttttgatctttggagtgagccatcaaaattgcac
acaatattaggtcacaactgcagtgttggggcaattgtcttccatcctcaggccactttg
actcttccagatgattcttgttgcatggcttcttgttcttcagatggttctgtaaaatta
tgggatttgattagtgaggaaccaatagctgacttggaaggccatcatccttatcgagtc
tcgagactggcatttcatccttcaggacgtttcttggctacatgtgtatttgaccattca
tggaggttatgggacttggaagcccaagaagaggttttacatcaagaaggtcacagtaaa
cccgtttatgacattagttttcagtgtgatgggtctctagctgccacaggaggaatggat
gcctttggtcgtgtctgggatcttcgtagtgggaggtgtattatgttcatggaaggacat
ctaaaatcaatcttggcaattaatttttcaccaaatgggtatcaaatagctacaggcagt
gaagataacacagtgaagatatgggatgtgcgacaacgacgttgtgaatacactattcca
gcacacaccaatcttgtctcccgagtcatttttgaaaaaaacaatggtcactacctcatt
actacatcctacgataactgtctaaaggtatgggcacatccaggttggacaccaatccag
actttgagtggtcacgatggcaaagtgatgggagctgatatttctcccaatgggaagtac
attgctacatgttcttttgataggactttcaagttgtggtctccagagtga
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