Limulus polyphemus (Atlantic horseshoe crab): 106470618
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Entry
106470618 CDS
T08968
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106470618
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106470618
Spliceosome [BR:
lpol03041
]
Complex C
Other components
Complex C specific factors
106470618
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
Utp25_C
FKBP_N
Motif
Other DBs
NCBI-GeneID:
106470618
NCBI-ProteinID:
XP_013786635
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MDTKSEGDGQYLKGRIVKPTITNERGNNSKHFRKLNKSEEKSSSDSNDDDYVPYIPLKER
RKQQLLKTGRLGALLLEEDRARSTTDPDDEEDEDQYGRKSNVSLLDQHNELKKKAEARKE
SALEKQLKEEEKILESVAEKKALMGVAELAKGVQYDDPIKTGWKPPHYILALSEDCHERV
RRKNRILVEGENPPPPIKTFKEMKFPRPILNGLKRKGINKPTPIQMQGLPSVLLGRDMIG
IAFTGSGKTLVFVLPIIMFCLEQEKKLPFIQNEGPYGLIICPSRELAKQTFEIISYYCQC
LENDGMPRLRICLCIGGTSVRDQLEVVRRGIHIMVATPGRLMDMLDKKMVNLDICRYLCL
DEADRMIDMGFEEDVRTIFSYFKGQRQTLLFSATMPKKIQNFARSALVKPVTVNVGRAGA
ASLDVIQEVEYVKQEAKIVHLLDTLQKTAPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIH
GGKDQEERSRSVEAFRKGQKDVLVGTDVASKGLDFENIQHVINYDMPEDIENYVHRIGRT
GRSGKTGIATTFLNKACDESVLLDLKHLLIEAKQKVPQFLATLQSENEKYLDLGDERGCS
YCGGLGHRITDCPKLEAMQNKQASNIGRRDYLANNSADW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaaatcagaaggtgatggtcaatatttaaaaggaagaattgttaagcctaca
attacaaatgaaagggggaataatagtaagcattttcgaaagcttaacaaaagtgaagag
aaaagtagtagtgattcaaatgatgatgattatgttccctacattccactgaaagaaaga
agaaaacagcagctactgaaaacaggccgtctgggagcacttctgttagaagaagatagg
gcacgatcaactactgaccctgatgatgaagaagatgaagatcagtatggtagaaagtct
aatgtgagtcttcttgatcaacataatgaattgaaaaagaaagcagaagctcgtaaggaa
agtgctcttgaaaaacaattaaaagaggaggaaaaaattttggaaagtgttgctgaaaag
aaagctcttatgggagttgctgagcttgctaaaggagtacagtatgacgatccaattaaa
acaggttggaaacctccccattacattttagccctgtcagaagattgtcatgaaagggta
cgaaggaaaaacaggattcttgttgaaggagagaatccacctccaccaataaaaacattt
aaggaaatgaaatttcctcgaccaatactgaatggattgaaaaggaaagggattaacaag
ccaactcctattcagatgcaggggttaccatcagttcttttaggtcgagacatgataggt
attgcctttactggttctggaaagacccttgtgtttgttcttcctattattatgttttgt
ttggaacaagaaaaaaaattacctttcattcagaatgaaggcccgtatggactgattatc
tgtccctcaagagaacttgctaaacagacctttgagattatcagttactactgtcagtgc
ttggagaatgatgggatgcctcgactacgtatatgtctttgtattggtggaacctctgtt
cgggatcagctagaagttgttagaaggggtatacatatcatggttgccaccccaggtcgt
cttatggacatgctggataagaaaatggtcaatcttgatatctgccgatatctctgtctt
gatgaagctgacaggatgattgacatgggctttgaggaagatgttcgaacgatcttctct
tacttcaagggacagagacaaactcttcttttctcagctactatgcctaagaagattcag
aactttgctcgtagtgcccttgtgaaacctgttacagttaatgttggtcgagcaggagca
gcaagtcttgatgttattcaagaagtagagtacgtgaagcaagaagccaagatagttcac
ttattggatacactacagaaaactgctcctccagtattgatatttgcagagaaaaagcaa
gatgttgatgctatccatgaatatttgctattgaaaggagttgaggctgtggcaattcat
ggtggcaaagatcaagaagagagatcccgttcagtggaagcttttcgaaaaggtcagaag
gacgttcttgttggcacagatgtagcttctaaagggttggactttgagaatatacaacat
gttataaattatgatatgccggaagacattgaaaactatgttcatcgtattggtagaaca
ggtcgttctggtaaaacgggaattgctacgacttttcttaataaagcatgtgatgagtca
gtgttactagatttgaagcacctccttatagaagccaaacagaaagttcctcaattcctt
gcaaccctacagtctgagaatgaaaagtacttggatcttggagatgaacggggctgttca
tactgtggtggcctgggtcatcgaattacagattgtccaaaactagaagccatgcagaac
aaacaagcttccaatattggtcgccgtgattatcttgctaacaacagtgctgattggtag
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