Limulus polyphemus (Atlantic horseshoe crab): 106470887
Help
Entry
106470887 CDS
T08968
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03030
DNA replication
lpol03410
Base excision repair
lpol03420
Nucleotide excision repair
lpol03430
Mismatch repair
lpol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106470887
03410 Base excision repair
106470887
03420 Nucleotide excision repair
106470887
03430 Mismatch repair
106470887
03440 Homologous recombination
106470887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpol03032
]
106470887
03400 DNA repair and recombination proteins [BR:
lpol03400
]
106470887
Enzymes [BR:
lpol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106470887
DNA replication proteins [BR:
lpol03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
106470887
DNA repair and recombination proteins [BR:
lpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
106470887
MMR (mismatch excision repair)
DNA polymerase delta complex
106470887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
106470887
NCBI-ProteinID:
XP_013786917
EnsemblRapid:
LOC106470887
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MRSNKDGITQAVLAVGVVIKESIYGYHVNRKVPFLKITMALPRLIAPAKRLLETGVVNVP
SYGSRAYQPYESNIDFEIRFMVDTGIVGCSWIELPPKKYQVRSKDNAPSPISRCQIEVDV
AWDSFISYPPEGEWAKVAPFRILSFDIECAGRKGIFPEPEKDPVIQIANMVIRQGEKDPF
IRNVFTLNSCAPIVGSQVLSYMKENQMLEKWADFVREVDPDIITGYNIQNFDITYLINRA
KTLNVKPFPFLGRVINRASVIKNSMIQSKQMGRRENKFINTEGRIQFDLLLVLLRDYKLR
SYTLNAVSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAMLPLRLLDKLMCII
NYMEMARVTGVPLSYLLSRGQQIKVVSQLLRKAKEHDLVIPVHNPEQGDDFTGATVIEPV
KGYYKDPIATLDFSSLYPSIMIAHNLCYTTLLPNQTRNQMNPDEFIKTPSDNYFVKKSVR
KGILPEILENLLSARKRAKEDLKKETDPLRKKVLDGRQLALKISANSVYGFTGAQVGKLP
CLEISQSVTAFGRMMIEKTKTLVEEKYNIANGYAQNAKVIYGDTDSVMVNFGIPFPPSGD
HVEALKQVMELGKVAAEYVSGHFTSPIKLEFEKVYFPYLLINKKRYAGLYYTKPETHDKM
DCKGIETVRRDNCPLVANLINMCLQKILIERDPSGAVEYAKQIISDLLCSRVDISQLVIT
KELTKTDDEYSAKQAHVELAHRMKKRDPGSAPNLGDRVPYVIIAASKGTAAYLKSEDPIF
VLENNIPIDTQYYLENQISKPLLRIFEPILGEDKAKSCLLKGDHTRTKTVVMSKVGALAA
FTKKRATCIGCKALLDNEKNPICKHCKPREPEFYQNEMVQLNALEEKFARLWTQCQRCQG
SLHEDVLCTSRDCPIFYMRKKVQKDLADQEKVISRFGIPSW
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcaaacaaggatggaattactcaagcagtattagctgtcggtgttgtgataaaa
gaaagcatatatgggtaccatgtaaacaggaaagtaccgtttttaaagatcactatggct
ctgccaagacttatagctccagctaagagactcttggaaactggcgtagtaaatgtgcca
tcgtatggcagtcgtgcataccaaccatacgagagcaatattgactttgaaatcagattt
atggttgatactggaatagtgggatgtagctggattgaattgccaccaaaaaaatatcaa
gttcgaagcaaagataatgcacctagtcctatttcccgttgtcagattgaggttgatgta
gcgtgggacagttttatcagttatccaccagaaggtgaatgggctaaggttgctcccttc
agaattttgagctttgatatcgaatgtgctggtagaaaaggtatctttccagagcctgag
aaggaccctgtaattcagattgccaacatggttatacgacaaggagagaaagaccctttc
attcgtaatgtttttaccttgaatagttgtgcaccaattgttggctctcaggttctgtcg
tacatgaaggagaatcaaatgcttgagaaatgggcagattttgtacgagaagttgaccct
gacatcattactggttacaacatccagaattttgatataacgtaccttataaaccgagcc
aagacgcttaatgtgaaaccttttccattccttggacgagtaataaacagagcatcagtt
atcaaaaattcgatgattcaatcaaagcagatgggcagacgtgaaaacaaatttattaat
acggaagggaggatccagtttgacttgttactggttttgctgagggactataaactccga
tcatacaccctcaatgccgtaagttttcattttcttcaagaacagaaagaagacgtacaa
cattccattattacggatttacagaatggaaatgaacaaaccagaaggcgacttgctgta
tattgtttaaaagatgctatgttacctttaagacttttagacaagctgatgtgtattatc
aattacatggaaatggctcgggtgacaggggtgcctttgtcttatttactttcacggggt
caacagattaaagtagtgtcccagcttctgaggaaggcaaaagaacatgaccttgtcata
ccagttcacaaccctgaacaaggtgatgacttcacaggtgctacagtcatcgaacctgtg
aaaggatattacaaagacccaattgcaactctggacttttcttcactatatccatctatc
atgattgctcacaatctgtgttacacaacactcttgccaaatcagactagaaaccagatg
aatcctgatgagttcattaaaactccttctgataactattttgttaagaagtctgttaga
aaaggaatccttccagaaattttggaaaacttgttgagtgccagaaaaagagccaaagaa
gacctcaaaaaagagactgaccctttgagaaagaaggtgctagatggccgccaactggct
ttgaagattagtgctaattctgtgtacgggtttactggtgctcaagtgggcaaacttcct
tgtttagaaatttctcagagtgtgacagcttttggacgtatgatgatagagaagactaaa
acattggtcgaagaaaaatacaacatagctaatggctatgcccaaaatgcaaaggttatc
tacggcgacactgattccgtcatggtcaattttggcattccctttccaccttcaggcgat
catgttgaagcattaaagcaggtgatggagcttgggaaggtcgcagcagagtacgtgtcg
ggtcactttacatcaccaataaagcttgagtttgagaaggtttacttcccatacttgctg
attaataagaaacgctatgctggcctttactacaccaaaccagaaacacatgacaaaatg
gactgtaaagggatagaaacagtacgtagagataactgccctcttgtggctaacctcatt
aacatgtgccttcaaaaaattctcattgaaagagaccccagtggagcagtagagtatgcc
aaacagataatttctgacctcctgtgtagtagagtagacatatctcaactggttatcacc
aaagagctgactaaaacggatgatgaatattcggcgaagcaagcacacgttgagttggca
cacaggatgaaaaaacgagacccaggaagtgcacccaatcttggtgacagagttccttat
gttatcattgctgctagtaaaggaacagcggcatacctcaagtctgaagaccccattttt
gttctagagaataacattccaattgatacccagtactacctggaaaaccagatctccaag
cctctgctccgaatttttgaacccatcctgggagaagataaagcaaagtcctgcctttta
aagggagatcacacaagaacgaaaactgtagttatgtcaaaagtgggagctttagcagcc
ttcacgaagaaacgagccacttgcattggttgcaaggctttgttggataatgaaaaaaat
cctatttgcaaacactgcaagcccagagaacccgagttttatcaaaacgagatggtccag
ttgaatgcacttgaagagaagtttgctcgactatggacacagtgtcaacgttgccaagga
agcttacacgaggatgtattgtgtacaagtcgggactgtcccatattttatatgaggaag
aaagtacagaaagatttggctgaccaagaaaaagtgatttcaagatttgggattccaagt
tggtag
DBGET
integrated database retrieval system
