Limulus polyphemus (Atlantic horseshoe crab): 106471354
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Entry
106471354 CDS
T08968
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpol04131
]
106471354
Membrane trafficking [BR:
lpol04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106471354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_VAB
VPS13_C
TraE
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
106471354
NCBI-ProteinID:
XP_022255668
LinkDB
All DBs
Position
Unknown
AA seq
2141 aa
AA seq
DB search
MQIRGMDAQLTLMNSKTVLNTLLKEVLVVDSCLNAVYPNILSTTSDEVLRVEVVTFDKAT
EDEKYLDMSAVDLKLKVSLGATKLVFLNRYISKLLNFISEFETAKEKIAEASVAAAEVAK
HGMEEAYQKATRVSLDIHLKAPIIIMPQNFHSETVLIADLGTLKLFNAFTMLNISNDCGI
PAIFDNLCLEFSDLKLSTAIVNTVSGKILAESMLLEPINLKLEVVRNLAIGWYMEVPEVA
VKGNLAAVRVILSQEDITIIMKFLVENLGDAERNISSSEYSAKASVVEKHTSGKKISVNE
HMEDKRKHSELIESVFKRMTFAFQLDSFKACLYEGSSNLTSGLSERKPECSLAQFELVTI
TIKGEILSDSSFCGNVILVNCILDDKRSIRKKGITRLMDRVPVKNDTENMIDITFRQDLN
LDKFLFTKISSFNLVLNVDYLMILGDFFVKAMPENLSPQPTTTAVPETPDVTDHADAGPF
GCTSINLNIKEPDLILIEDMEDFNSNAIILKFKMDAKMMMSPNSQSVSGVISHLQLFTAC
FNPELRANTMSEILRPCDITLYSYSPNMKGQHVNIDFTSIFLNVSPNTISIFMNILSSLA
SQKSSKELDEAKSSEEYSKLWTPKKLEECSFWFLENIGFAEEAVEDVIVCIEDKNQMKVD
SELFMLNMNTITLTVETGVGIQTVPMVMMEASFQAQVQNWNSNLHLKSVFSMEIVYFNEK
LAVWEPLVEPVKNASGRSEPWKLLIEITKNSELPEASTEDIESIEISLQPPVMRVNICSS
DVMELMVSKVALEVLTHLGHAFGEAVKQAHKHKYIQPEAPYVVKNHLGTPMSVILANNIF
QVVGQDHFGFKEVILEPNSSVYLKLISSAKEESTTSILIKQNVKLEEALCIKIETDLINT
VRNINISHVGKRYFQLPLKTYPGDQWGFVVDVASLFGSKIITFQSCITVRSDFSNPMELY
YMRPGGNELEMCGVLEPEKTFFVPLYGVYTPTSQFFFKPNEGSFSVCTEPFVWKDLMSEP
STSKILQCTSHSTESRNLFFKVFGNVEQVYFERSMKKTLVSTCYALHIRPTASLRNLLPF
TIRYTIQGVNEEFVLEEGFTHDLVSAYPGKTYLQIKLPNYLERKWVCCKEINHTVADLSI
WTFSSNVLGSELSLDLGMHTRKSDGYLDMEIYCPFWMINKTNLLLTYKGEQHNITTHPGS
LNAPLLFSFRAKNFFSKKKASLKVENSEWSDEFAVDAVGSSGSIAAKIKDGKTYCLGVQI
MLGQTSLNKIVVFTPFYMLMNNSKFDIQVKENLESAQWVTVFAGECAAFWPDQRKNMEML
VRYANSENQTAPFSFKEPHSSLLRLGGLNSAIYVDCQVGESSTVLTFCNYYEGSAQVRLI
NHTDSFTIEYFQCGKNKKVELVAQHCILYVWEDPMGERELLWSCGNKINGRNNLIEDGIG
EFFADKDSKIYWVSFLDGLQRTLIFTEDIAVATAAQEAGELERIEQEITVSLQGVGISLV
DSERRSEIVYMSLANSGVLWEQRKFRSHRFKPVSLRENVILEEGYQKYLRETQIRRKPKS
KFSLEGKLEVDFDEMIMYKPKKSHIRRSFQLGIWAQYSSSPHQLQLHAKINKLQIDNQLV
DCVFPVVLVPVPLPKSVAADSAPKPFTEISIMMRKTEHSSLNQFKYFKVLIQEFQVKLDQ
SFLNSLISFFSPKEPAHINHKELLEKDKVAIKKDLKGFATIYSSQDQKSFYDILHFSPIK
IHLSFSMTGGGKHTNQRTAIHSDFINLLLQSVGVTVTEIQDVIFKLNYFEKQNAFLTQRQ
LISDATMHYTGQALKQLYMLVLGLDVIGNPVGLLLGITEGVGDFFYEPFQGAIQGPEEFA
EGLAIGVKSLLGHAVGGTAGAVSRITGTLGKGLAALTMDQEYQKKRRQQMNKQPEDVAQG
LAQGGKGIIMGVFEGVTGVVTKPVTGAKEEGIGGFFKGIGKGLIGVVARPTGGVVDFASS
GLEAVKKITELSDEVKRTRCPRYIHPDTVIKPYHRIEAEGNQLLQETEKGRFVTTDEYIA
HLPLGSEDKSYLLVTSRRVMYISQGDVFGQCNTEWQIVWNDIRETPQITEKGIKFMLKEP
RKKKLGGLLRNEETGKLVYISDPKLCAWIVGKVEEAMKQCI
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcagaggaatggatgctcaactgactcttatgaattcaaaaacagtgttaaat
actctcttgaaagaagttttggttgttgattcatgtctaaatgctgtgtatccaaatatt
ctgtctactaccagtgatgaagtgctaagagtggaagttgtcacttttgataaagcaaca
gaagatgaaaagtatctggacatgtcagctgtggatctgaaattgaaggtatctcttggt
gcaacaaaactagtcttcttgaatagatacatttctaagttattgaattttatcagtgaa
tttgaaacagcaaaagagaaaatagcagaagctagtgtggcagcagcagaagtggccaaa
catggcatggaagaagcttatcaaaaagcaacaagagtttcattagatatacaccttaaa
gccccaattataataatgccacagaattttcattctgaaacagttctaatagcagatttg
ggaacactgaaattgttcaatgcatttacaatgctgaatataagtaatgattgtgggatt
ccagcaatatttgataacttgtgtttagagttctctgatttgaagctatcaactgcaatt
gtgaacactgtgtctggaaaaattcttgccgaatctatgttacttgaaccaattaatttg
aagttggaggtagttcgcaatctggccataggatggtacatggaagttccagaagtagca
gtcaaaggtaatcttgctgcagtgagagtgattttgagccaagaagatattaccattatt
atgaagtttttggttgaaaatcttggtgatgcagaacgaaatatctcgtcctcagagtat
tcagccaaagctagtgtagttgaaaaacataccagtggaaagaaaatttctgtaaacgaa
catatggaagacaaaagaaaacactctgaactcatagaatctgtgtttaaaagaatgaca
tttgcttttcagttggacagtttcaaggcttgtttgtatgagggaagctcaaacttgact
tctggtctttctgaaagaaaaccagaatgttcattggctcagtttgagcttgtgaccata
acaataaaaggagaaatattaagtgatagttctttttgtggtaatgtaattcttgttaac
tgcatcttagatgataagcggtctataaggaaaaaaggaatcaccagactaatggatagg
gttccagtcaagaatgatactgagaatatgattgatattaccttcagacaagatttaaat
cttgacaaatttttgtttactaaaatctcaagttttaaccttgttcttaatgtggattat
ttaatgatattaggagatttttttgttaaagctatgccagagaatttgtcaccacaacct
acaactactgcagttccagaaacaccagatgttacagatcatgctgatgctggacctttt
ggatgtacatctataaacttgaatattaaagagccagatttaatacttatagaagacatg
gaagattttaattctaatgctattattttgaagtttaaaatggatgctaaaatgatgatg
tcaccaaattctcaatcagtatctggtgtcatttctcaccttcagctttttacagcttgt
tttaaccctgaattgagagctaatacgatgtcagaaatattaagaccttgtgatattact
ctttattcttattctcctaatatgaaaggtcaacatgtgaatatagatttcacaagcatt
tttctgaatgtatcaccaaacactatatccatattcatgaatattttgtctagtttagct
tctcaaaaaagttcaaaagagctcgacgaagcaaagtcttctgaagaatattcaaagttg
tggacaccaaagaagcttgaagaatgctctttttggtttttagagaatattggttttgct
gaggaagctgtagaagatgttattgtatgcattgaagataaaaatcaaatgaaagttgac
tcagaattattcatgttgaatatgaatactataacattaacagttgagactggtgtaggg
atacagacagttccgatggttatgatggaggcttctttccaggcacaagttcaaaattgg
aattcaaatcttcatcttaaatcagttttttcaatggaaatagtttacttcaatgaaaag
ctagctgtgtgggaaccacttgttgaaccagttaaaaatgcatcagggagatcagaacct
tggaaactgctaatagaaataaccaagaattctgaattaccagaagcttctactgaagac
atagaatccatagaaatctcacttcagcctccagttatgcgtgttaatatatgttcaagt
gatgtaatggaactgatggtcagtaaggttgctctagaggtcttaactcatcttggccat
gcttttggtgaagcagttaaacaagcccataaacataaatatatacagccagaagctcca
tatgttgtgaaaaatcacttgggaactccaatgtctgttatactagccaataacattttt
caggttgttggacaagatcattttggtttcaaagaagtaattttagagccaaatagttca
gtttatttgaaactcatttcttctgcaaaggaagaaagtacaacttcgatcctaattaag
cagaatgtcaaattagaagaagcattgtgcatcaaaattgaaacggatttgatcaacact
gtacgaaacatcaacatttctcatgttggcaaacgatattttcagctaccccttaaaacc
tatccaggtgatcagtggggttttgttgttgatgtggcttcattgtttggctcaaaaata
attacgtttcaaagttgtatcactgtcagaagtgatttttcaaatccaatggagttatat
tacatgagaccaggaggaaatgagcttgaaatgtgtggagtcttagaacctgaaaagaca
ttctttgttcctttatatggagtgtacactcccactagtcagtttttctttaaacctaat
gaaggttcgtttagtgtttgtacagagccatttgtttggaaggatctaatgagtgaacca
agcacatccaaaatactacaatgcacaagccacagtactgaaagcagaaacctttttttc
aaagtgtttgggaatgttgaacaagtttattttgaaagatctatgaaaaagacgttagtc
agtacatgctatgcactacatatacgaccaactgcatcattgagaaatttgcttccattc
actatcagatatacaatacaaggtgtgaatgaggaatttgtcttagaggaaggttttact
catgatcttgtatctgcttatcctggtaaaacctacctgcagattaagttaccaaattat
ttggaacgaaaatgggtgtgttgtaaagaaataaatcacactgtagctgatttgtctatt
tggacattttcttcaaatgtattaggtagtgagctttccttagatcttggcatgcatact
cgaaaatctgatggttatttagatatggaaatctactgtccattttggatgattaacaaa
acaaatctacttctaacttacaaaggagaacaacataatattactacccatcctggaagt
ctaaatgcccctttgttgttttcattcagagctaaaaattttttttcaaaaaagaaggct
tctttaaaagtggaaaattcagaatggtcagatgaatttgcagttgatgctgtgggaagc
agtggttcaattgctgcaaagattaaagatggtaagacctactgtttgggtgtccagata
atgcttggtcaaactagcttgaacaaaattgttgtgttcactccattttatatgttaatg
aataacagcaagtttgatattcaggttaaagagaacctggaatcagcacaatgggtaact
gtttttgctggtgagtgtgctgctttttggcctgatcagagaaaaaatatggaaatgtta
gtgagatatgcaaacagtgaaaatcaaactgcacctttttcgtttaaggaaccacattca
agccttctcaggttgggaggtttgaatagtgctatttatgtagattgtcaagttggagaa
tcttcaactgtactaaccttctgcaattactatgaagggtcagctcaagttcggctaatt
aatcatacagatagttttactatagaatactttcagtgtggtaaaaataagaaagtagag
ctggtagcacaacactgtattctctatgtgtgggaagatccaatgggtgaaagggaactg
ctttggtcgtgtggaaataagatcaatgggagaaacaatcttatcgaagatggaattggt
gaattttttgctgacaaagattcaaaaatatactgggtatcttttctggatggtttacag
cggacccttatatttactgaagatattgctgtagcaactgctgcacaagaagcaggagag
ctagagcgtattgagcaagaaatcactgtatccctgcagggtgtaggaatctctcttgta
gacagtgagagaagatctgagattgtgtacatgagcttagctaattcaggagtgttgtgg
gaacagcgcaagttcagaagtcataggtttaaacctgtaagtttaagagaaaatgttata
ctagaagaaggataccagaaatatttgagagaaactcagataagaagaaaaccaaaatca
aagttttctcttgaagggaaacttgaagtagatttcgatgagatgataatgtataaacct
aaaaagagtcatattcggagatcttttcaacttggcatttgggctcagtatagttcatct
cctcatcaacttcaactgcatgcaaagattaacaagctacaaattgataatcaactggta
gattgtgtctttcctgtggttcttgttccagtgccacttccaaagtctgttgctgctgat
agtgctcctaaaccttttactgaaatcagtatcatgatgaggaaaacagaacatagttca
cttaatcagtttaaatattttaaagtattgatccaggaattccaagtgaaattagatcaa
agttttttaaactccttgatatcattcttttctccaaaagaaccagctcatataaatcac
aaggaattattggagaaagacaaagtggccataaaaaaagatttgaaaggttttgcaaca
atatactcttctcaagatcagaagagtttctatgacatccttcatttttctccaattaaa
attcatttaagtttctccatgacaggaggcggtaagcatactaaccaacgaactgctatt
cattctgatttcataaaccttcttttacagagtgttggagtcacagttactgaaatacaa
gatgtaatattcaagctaaattattttgagaagcaaaatgccttcctcactcaaagacaa
ctcatttctgatgccaccatgcattacacaggacaagctctcaagcaactttacatgcta
gtgcttggccttgatgtaattggtaatcctgttggacttttgttaggaattactgaaggt
gtgggtgacttcttttatgaaccatttcaaggggcaatacaaggtcctgaagagtttgca
gaaggacttgctataggcgttaaaagtcttttagggcatgcagttggaggaacagctggt
gctgtttctcgtatcactggcactttaggtaaaggcctggcagctcttacaatggatcag
gaataccagaagaaaaggcggcagcaaatgaacaagcagcccgaagatgttgcacagggc
ctagcacaaggtggaaaaggtattatcatgggtgtctttgaaggagtcactggggtggta
actaaaccagtgactggtgctaaagaagaaggaattggaggcttcttcaagggtattggg
aaaggtctgattggtgttgttgctcgtccaacaggtggtgttgttgattttgctagttca
ggactggaggcagtaaagaaaataacagaactttctgatgaagttaaacgaacaaggtgt
cctcgttacattcatccagacacagttattaagccatatcaccgcattgaagctgaagga
aaccaacttttgcaggaaactgaaaaaggaaggtttgtcacaacagatgagtatatagct
catctaccacttgggtctgaagataaaagttacttgttagtcaccagcagaagagtaatg
tatataagtcaaggggatgtgtttggccagtgtaacacagagtggcagattgtctggaat
gatatcagggaaaccccacagataacagagaagggaatcaaattcatgctgaaggagcct
aggaaaaaaaagttaggaggactgcttagaaatgaagagacggggaagttagtttatatc
tctgatccaaaactttgtgcttggattgtgggcaaagttgaagaagccatgaagcaatgt
atttaa
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integrated database retrieval system
