Limulus polyphemus (Atlantic horseshoe crab): 106471527
Help
Entry
106471527 CDS
T08968
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106471527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpol03009
]
106471527
Enzymes [BR:
lpol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
106471527
Ribosome biogenesis [BR:
lpol03009
]
Eukaryotic type
90S particles
Other 90S particles
106471527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
106471527
NCBI-ProteinID:
XP_013787580
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MAAKRKYTDDDDNESFVNSEKISVPSHIRNQQKRLIIILEKANLETVKVGKNFELLNCDD
HQSQMKKYNKNPGQCRPDIVHQCLLMLFDSPLNRAGFLQVYVHTDKNVLIEINPQTRIPR
TFKRFAGLIVQLLHKLSIHAADGPQKLLKVIKNPITQHLPVGCKKLVTSYHANKLVNPRE
LAPPSEPVVIVVGAMAHGSVDVDYTEDTIAISEYPLSAALTCSKLCTGFEEAWGIH
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaaaaggaagtataccgacgatgatgataatgaatcgtttgtaaatagtgaa
aaaattagcgttccttctcatattcgtaatcagcaaaagcgacttataataatattagaa
aaagcaaatttagagacagtcaaggttgggaagaattttgagcttttgaattgtgatgac
catcaatcacaaatgaagaaatacaataaaaacccaggacagtgtcgtccagacattgta
caccagtgtttactgatgctatttgacagtccattgaatcgagcaggattcctacaagtg
tatgtccatacagacaaaaatgttcttattgaaataaacccacagactaggatacctaga
acatttaaacgatttgccggactgatagtacaacttctacacaaactgagcattcatgcg
gctgatgggcctcaaaagctactcaaagttattaaaaaccctataacacaacatttgcct
gtaggatgcaagaaactagtaacttcatatcatgccaataagcttgtaaatccaagagaa
ctagctccacctagtgaacctgttgtcatagttgttggagcgatggcccatggatcagtt
gatgttgattatacagaagacacaattgccatcagtgaatacccactatcagctgctctg
acctgctcaaaattgtgtacaggatttgaagaagcttggggcatccactag
DBGET
integrated database retrieval system
