Limulus polyphemus (Atlantic horseshoe crab): 106472728
Help
Entry
106472728 CDS
T08968
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106472728
03016 Transfer RNA biogenesis [BR:
lpol03016
]
106472728
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106472728
Spliceosome [BR:
lpol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106472728
Transfer RNA biogenesis [BR:
lpol03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106472728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
106472728
NCBI-ProteinID:
XP_022256982
UniProt:
A0ABM1TM76
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MTAFEEMGVLPEIGKAVEEMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQTVWETLKDLQSGKGKKGGKGXYVSITQKWIMSFFDRGDALAVSPDGLMCQSREPKSXH
GCRSTRGVQGKGKYYYEAKVTDEGLCRVGWSTLAASLEVGTDRQSFGFGGTGKKSFAKQF
DDYGEVSFTHCFLMRYFVVMERLDILAVSNILGLNLNNLAKVNRVVFRLVLNLRAKLTLK
GKYLGDAFKISPNLMKSAFFASVVLKDGYVAFCEAPKDNVVVSTITGGSSGAPNIVQNSP
QAIIIEPSRELAEQTLQCIVNFKKHIKDPGIREILVIGGVAAKDQISALQSGIDIVVGTP
GRLEDLISTGQLSLTQVRFFVLDEADGLLNMGYGDLINRIHQQIPKITADGKRLQMVVCS
ATLHSFEVKKLAERLMHFPVWVDLKGEDSVPDTVHHVVCIVDPRKDSSWMKLRRHIQTDQ
VHAQDNVRPGNNTAETMSEAVKLLKGEYTVRAINEHNMDQGIIFCRTKLDCDNMEKYLLS
QDRENRNRNGKYSCVCLHGDRKPQERKANLQKFKNREVKFLICTDVAARGIDVSGVPFVI
NVTLPDEKSNYVHRIGRVGRAERYTRFCMFLFP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttttgaagaaatgggtgttttgccagaaattggcaaagctgtggaagagatg
gaatggacgttacctacagatgtgcaggctgaagctgtgccactgattcttggtggagga
gatgtgctaatggctgctgagacaggaagtggaaaaactggtgctttttgtttgcctatc
cttcagactgtgtgggaaacattgaaagacttgcagtcagggaaagggaaaaagggggga
aaggggtagtatgttagtatcacacagaaatggatcatgagttttttcgacagaggggat
gctcttgctgtaagtccagatggattgatgtgtcaaagtcgagagccaaagtcttagcat
ggatgtcgaagcacaagaggtgtacaaggaaaaggaaagtattattatgaggctaaagtt
acagacgaaggattgtgtcgtgtgggctggtccactctagctgccagtttggaagttgga
actgatcgtcagagttttggttttggaggaacaggaaagaaatcttttgctaaacagttt
gatgactatggagaggtaagctttacacattgttttttgatgaggtattttgttgttatg
gaaaggttggatatccttgctgttagcaatattttgggccttaatctcaataatctcgca
aaggtcaaccgagttgtatttaggttagtcctaaatctacgtgctaagttaacattgaaa
ggaaagtatcttggagatgcttttaagatatcaccaaacttgatgaagagtgcttttttt
gcttcagtagtgttaaaggatggatatgtggcattttgtgaagcccccaaggataacgtg
gttgtttcaactatcacgggaggttcttcaggagctcctaatattgttcagaattcaccc
caggcaattattattgaaccatcacgagagttggcagagcagactctgcagtgtattgta
aacttcaagaaacacataaaagacccaggtatcagagagattttggtgattggcggtgtg
gcagctaaggaccagattagtgctctgcagagtgggatagacattgttgttggaacacct
ggtagattggaggatttgatttctacaggacagctttcactgactcaggttcgattcttt
gtattggatgaagctgatggcttgttaaacatgggatatggagatttaattaatcgcatc
catcaacaaattccaaagattacggccgatggcaaaagactgcagatggttgtatgctct
gctaccctccactcctttgaagtgaagaagcttgcagagaggttgatgcatttcccagtc
tgggttgatctgaaaggagaggacagtgtaccagatactgttcatcatgttgtctgtatt
gtggatcctcgaaaagactcgtcatggatgaaattaagacgtcatattcaaactgatcaa
gttcatgcccaagacaacgtaagacctggaaacaacactgcagaaactatgtcggaagct
gtgaagctgttgaaaggggagtatactgttcgagctatcaatgagcataacatggatcaa
ggaatcatcttctgtagaacaaagttagactgtgataacatggagaaatatcttcttagt
caggatagagaaaataggaacaggaatggcaagtattcttgtgtttgtcttcatggggac
aggaagccacaggaaaggaaagctaacctccagaagttcaagaacagagaggtgaagttt
ctcatctgtactgatgttgctgctaggggtatagatgtatcgggggtcccatttgtcatt
aatgtgacgctacctgatgaaaaatccaattacgtccacaggattgggcgagttgggaga
gctgaaaggtatacaagattctgtatgtttctctttccttaa
DBGET
integrated database retrieval system
