Limulus polyphemus (Atlantic horseshoe crab): 106472895
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Entry
106472895 CDS
T08968
Name
(RefSeq) DNA damage-binding protein 2-like
KO
K10140
DNA damage-binding protein 2
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03420
Nucleotide excision repair
lpol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106472895
09124 Replication and repair
03420 Nucleotide excision repair
106472895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpol04121
]
106472895
03400 DNA repair and recombination proteins [BR:
lpol03400
]
106472895
Ubiquitin system [BR:
lpol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106472895
DNA repair and recombination proteins [BR:
lpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106472895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
EIF3I
pAdhesive_15
zf-FPG_IleRS
DUF2582
Motif
Other DBs
NCBI-GeneID:
106472895
NCBI-ProteinID:
XP_013789019
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MPPVIRRKTQRVQKTFSHNSTENNLEFEDDDFEESRNANFRKRCKIEYSNKSCKVSRRRK
PVLCEVTRVPVSVITSTSSDTNSIDTTSSSNTSSCHGNNNCSTSSYFRTRQRMKCEPNSI
GKRSDKLQTQNSATDSSNVFAILDEKKQKKCNSNKLEESNDVCKKSQTGDGLSKVMDSKQ
MIQLQSFRDSSSVQNVKTCISDKDIWPAAGWMEKSNNINLELKHRCGPCLVEQSSNLVHN
LEQMMRGFYFNSRVKKSFRRPIIENFSRLKPYKMASPFDRRVTAVTWHPKHPSVVGVGSK
GGEVIMWNFENAADDLFIPGVGPGGSVCAMKFDVENPNFIFTASITGRVMRQDFHGKNSK
IFLDTFTWEKWFTSLDVLQSKKLIAVGDTSGCLYLLDTNGNMVGYTDISSHLYEDVIYIR
QAETYRLLVTASIDNTVKLWDLRMIKDRKSALFTFPHEKAVNSAYFSLANGSSLLTTDQH
SQLRVYSGPLWELEQVIAHPHRQFQHLTPIKACWHPLEDIVVVGRYPDEGFCAEDKRSID
LFDGHSGTLLFRLHNSEVPGIVS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagtaattcgacgtaagacacaacgtgttcaaaagacgtttagtcataattct
accgaaaacaatttggaatttgaggatgacgactttgaagaatcaagaaacgcgaatttt
cgtaaacgttgcaaaatagaatacagcaataaaagctgtaaagtaagcagacgaagaaaa
cctgttctgtgtgaggtaactcgggtacctgttagtgttataactagtactagtagtgat
actaatagtattgatactacttctagttctaatactagttcttgtcatggtaataataat
tgtagcaccagtagttactttagaacacggcagagaatgaaatgtgagcccaatagtatc
ggaaaacgttcagataagttacagacacaaaacagtgccactgattcatctaatgttttt
gcaattctagatgagaaaaaacaaaaaaaatgcaattcaaataagcttgaagaaagtaat
gatgtatgcaagaaaagccaaacaggagatggcttatcaaaagttatggattccaaacaa
atgattcaacttcaaagtttccgagactcaagctcagtgcaaaatgtgaaaacgtgtatt
tctgataaagacatttggccagcggcaggatggatggaaaagtccaataatatcaatttg
gaacttaaacacagatgtggcccctgcctagttgagcagagcagtaatcttgttcacaat
ttagagcagatgatgagaggattttacttcaactccagagtaaaaaagtcattcagaaga
ccaataattgagaatttctctcgacttaaaccttataaaatggcttcaccttttgataga
cgagtaacagcagtaacgtggcacccaaaacaccccagtgttgtaggagtaggatctaaa
ggtggtgaagtaatcatgtggaattttgaaaatgctgcagatgaccttttcataccagga
gtcggacctggtgggtcagtatgtgctatgaagtttgatgtagaaaaccctaacttcatt
ttcacagcttccatcacgggtcgagtgatgcgtcaagattttcatggaaaaaacagcaag
atttttctagacacctttacatgggaaaagtggtttacatcccttgatgttctacaatca
aagaagcttatagcagtaggtgatacttctgggtgtctatatcttctcgatactaatgga
aacatggtaggttacacagatattagcagtcatttatatgaagatgttatttatataaga
caagctgagacctatagactacttgtaactgcatccattgataatactgtcaagctttgg
gatctacgcatgataaaagacagaaaaagtgcattattcacatttcctcacgagaaggca
gtaaattcagcatactttagcttagccaatggcagttctcttttaacaactgaccaacac
agtcaattacgggtgtactctggcccactttgggaactagaacaggttattgctcaccct
catcgtcagttccaacatttaacacccataaaggcttgttggcatccactagaagacatt
gtggttgttggtaggtatccagatgaagggttctgtgctgaagataaacggtccattgat
ctttttgatgggcacagtggaactttactctttcggctgcacaatagtgaagttcctgga
atagtttct
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