Limulus polyphemus (Atlantic horseshoe crab): 106473034
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Entry
106473034 CDS
T08968
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04140
Autophagy - animal
lpol04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106473034
04148 Efferocytosis
106473034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpol04131
]
106473034
Membrane trafficking [BR:
lpol04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106473034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
zf-RING_Vps41
TPR_PEP5_VPS11
Beta-prop_EML_2
Beta-prop_HPS5
zf_RING_Vps8_fungal
WDR55
zf_RING_Vps8
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
zf-RING_11
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106473034
NCBI-ProteinID:
XP_013789165
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MERNEDLSNEASNENEEDSSTSSDETEEEVEPKLCYARIINDLPQILKKDAASCIAVDPK
FLALGTHWGVIHILDHQGNNIRSKELLLHTTTVNQISIDGNGDHIASCSDDGKVAIHGLY
SSEHNYILSLDRPVRAVALDPFFYKSGTGRRFITGDDKVMLHEKTFLSRYKNTVLHQGEG
QIRNIKWKGKFVACASDASIRVFDIESKVTISLIRKDHDPQLRPELYRCNMFWKDEKTLL
IGWADRIKVCVVQKRSPAEPVSKDLPCHYVQIVSLFSTDFYICGIAALEENLVVLSVLKE
DIQFPSAQASRPQLRVLEPHCEYSNEMSSDILSVRGFQEYSCKDYYLESLPNEGVFFILS
PKDVVIAKPRDEDDHISWLLEHEQFEEALQAVLIAKNLKRHSVTHVGQIYMGNLLEQKKY
NEAAKLCVTMLGSNRQLWEEEVYKFAQIQQLRAVAPYLPITDQKLDPAIYEMVLNEFLEH
DSKGFLKLVQEWPSDLYNIPTIIKAVDYRLTFDPDNNLLLLSLGELYTYEKKFDKALVIY
LKIGNNHRVFDLIREHSLFSVIHDKLEELMELDTKEATRLLVENVDKVPITLVVSKLSDK
PQLLYHYLDRLFQKDPELGEDHHGLLVQLYAEFDPDRLLSFLQSSNNYPLETALEICRQR
GLVEEEVFLLGRMGNTRDALCLITEKLGDIRQAINFCKEHDDVDLWKDLIRHSKDKPHFI
TVLLQNIGTHVDPIILIREIPQGMEIPGLRDSLVKILQDYNLQISLREGCKKILVSDCYG
LLERLNKQHRRGITIQEDQVCQACHRKVLVKDPRYAEDINVFYCKHSFHKDCLRVSELVS
RIRLFT
NT seq
2537 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaacgaagacttaagtaatgaggcttctaacgaaaatgaagaagatagttca
acaagttcagatgagacagaagaggaagtagaacctaaactgtgttatgcaagaattatc
aatgatctgccacagattctaaaaaaagatgcagcaagctgtatagctgttgatccaaag
ttcttggcactgggtacccactggggagttatacacattcttgatcatcaaggaaacaac
atcagaagcaaagaactgcttttacacaccaccactgttaatcagattagtatagatggg
aatggagaccatatagctagctgttctgatgatggtaaggtggctatccatggtttgtac
agttcagaacataactacattttgagtctggatagaccagtgagagcagttgctctggat
ccttttttttacaaatctggaacaggaagaagattcatcactggagatgacaaggttatg
ctgcacgagaagacattcctctctcgatataagaacacggttctccatcaaggggaaggc
caaatcagaaacatcaaatggaaaggaaaatttgtagcttgtgcaagtgatgctagcatt
cgagtgtttgatattgaatccaaagtgactatttccttgattagaaaggatcatgatcct
cagctacgtcctgaactttatcgatgtaatatgttttggaaggatgaaaagacacttcta
attggctgggcagacagaataaaggtctgtgttgttcagaaacgttctccagctgagcct
gtatcaaaggaccttccatgtcattatgtacaaattgtgtcccttttctcaactgacttt
tacatttgtggaattgctgccttggaggaaaatttggtggttttatcagtactaaaagaa
gacattcagtttccgtcagcgcaagcttcacgtccccagctacgtgttcttgagcctcat
tgtgaatatagtaatgagatgtctagtgacatcctttcagtgcgaggattccaggaatat
tcctgtaaggattattatcttgagagtttaccaaatgaaggtgtcttcttcatcttaagc
cctaaagatgtggttattgctaaacctcgggatgaagatgatcacatttcctggctttta
gagcatgaacagtttgaagaagctctccaagctgttctgattgctaagaacctgaagaga
cattctgttacgcacgtgggccagatctacatgggtaatcttcttgaacagaagaagtac
aatgaagcagccaagctctgcgtgaccatgcttgggtccaatagacaactctgggaggaa
gaagtttacaagtttgcacagattcagcagctgcgagctgttgctccttacctaccaata
acagatcagaaacttgatcctgccatctacgagatggttctgaatgagtttcttgaacat
gacagcaagggatttctgaagctagtgcaagaatggcctagtgacctttacaatattcca
acaataataaaggcagttgattatcgtctgacctttgacccagacaacaatctgttgtta
ctaagcttaggagagctatatacatatgagaaaaaatttgacaaggccttagttatttac
ctgaagattgggaacaatcaccgggtgtttgatcttatacgagagcatagtctgttcagt
gtaatccatgataaattagaagaactgatggaattagataccaaagaagctacacgtttg
cttgtggaaaacgttgataaagttccaattacgttggtggtctccaagctaagtgacaag
cctcaactgttgtatcattatctagataggctcttccagaaggacccagaacttggtgaa
gatcatcatggcctgttggttcaattgtatgctgaatttgatcctgatcgccttctgtca
ttccttcaaagttccaacaactacccgttagaaacagctctggagatctgtagacaaaga
ggtcttgtagaagaggaagtgttcttgttaggtcgtatggggaatacccgtgatgcactc
tgcctcatcacagaaaagcttggtgacatcagacaggcaattaacttctgtaaagagcat
gatgatgttgatttatggaaagatttgatcagacactcaaaggacaaacctcacttcatt
acagtacttttgcaaaacattggaacacatgttgacccaattattctcattcgagaaata
cctcaaggcatggaaatcccaggactgagagattcattagtgaagatactacaggactac
aaccttcagatatcactgcgtgagggatgcaaaaagatattggtctcggactgctatggt
ctattggaacggttaaacaaacagcacagaagaggaattaccatccaagaagatcaggtg
tgccaggcatgccatcgtaaagtgcttgtgaaagatccgagatatgctgaagatattaat
gtcttctactgcaaacacagtttccataaagactgcttacgtgtctcagagctggtaagt
cgcatacgtttgttcac
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integrated database retrieval system
