Limulus polyphemus (Atlantic horseshoe crab): 106477239
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Entry
106477239 CDS
T08968
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lpol00535
]
106477239
04091 Lectins [BR:
lpol04091
]
106477239
Proteoglycans [BR:
lpol00535
]
Cell surface proteoglycans
Others
106477239
Lectins [BR:
lpol04091
]
C-Type lectins
Others
106477239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
ElaD_SseL-like_N
EGF
Motif
Other DBs
NCBI-GeneID:
106477239
NCBI-ProteinID:
XP_013793284
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
FISSPDFEYFSLKIQYSSFFSASFYGASYVSVPLQDASSDTDIFFRFKTLRADALLFLAA
GPPDYCLVTLHGGEIKVRINLGSGEEELTSVPGLKLNDLLWHEIEIQKIDSELTLRIDGI
HTTYLDIKGRFFELNVKSGIFIGGLGGFDDLFLGNLQNFRGCLDEFFFNNIDILRLAVDS
ADRLGVYGVTWDCSDEFEASSHQPISFIEDESFVALSALSTRNGGSVSFDVNTQSELAVL
FYNSGNPSKTDFLAVEIISGKLTLSVNEGNGVVVLTSDKAVNDGLWHHVDTQFSPTYVEL
TVDGESKNIRPGLGENRFFDFTDYLYVGGIEPKRKARALQHGLQSVLLGGAKSSLAGCLK
NIKINNQVRGHREVEISRGVRSDCVWEYPCLQKPCIEEAVCLQEGFDNFRCTCDKSVCVR
SNFSSGYRLFTKSSLPVDMEILTLNPLEVSEGGNDLITSKHINIVLDYQKYGVRESGVLF
HIVDPPKHGTLEIEIWNKIADNIFTLLDLYTDKVRYTHDGSENHSDEFVTELEFRARNYR
LPPFLEERHRFVFHIKVSPVNDPPRLILPPSKVLRLAKHTKIAFTSDVLHTEDPDNEASS
LVYSVLSIRTDNEGFVENVRDPGKPVDTFTQEEINNKQINYVHRGPANTRIALRVSDGIE
TGQTMVLRVATFDLMLSLINNTGIVLPYNSYAIISNSNLTFATNSPDQDLEIRYDVTRLP
QHGNIQKRRNNGRWRPVNHFTQRHLNKGKVRYVHTSGKPSQDEFKFSVSCMDIKVSTIYD
FRIIFIKVSLIEVSNENLVLNKITEDILTSDHLKYQTSPVETPTTKIHYTILTPPSYGHL
FLTKPGVKEPWKLEVGSVFTQEDIGNKFIKYKLLWKSYSAINDTFHFKVASTGVATKPQV
FSVIHIPVVTGAMIQVEKLQVLEGGQAEVNKGYLYVKTPTTETIIYNVTAQPQHGILRLM
NSALTVVEEDNPNSFSNEDLEEKRLLYIHDDSEHDKDKVRFTAFADNSDDDFVYYGTLHI
GVMMKNDNPPVRSIDKTFFVKTNGERKLTSKDLKYEDLDIDSKPTNIQYTRRGIPNGALF
HTDSLDTQVFQFTQDDLDKERLIFRHNGPSYGKAVLWITDGQFYVTGILEIQASGPFINV
TKNTGLIVQRGDTGRITTRNLSVETNVGSSMNDLTFKVVSRPSHGELLINGNVVHQFRYR
DLELSLLEYENDNSQSFSDSFEFLAFVEDVSVDGIFSIQVFPESFWESLQVLSNKTIYVD
EGKAVVIDPASLNIAHTNINPANISYIITIDPQMGFIRVNENNTYHNVKTSDKTSRRRFS
QAMINEGIVEYVQTKSNVSFDYFIFDVTNGITTMPGLQFTISIISNVILLLTGNITVVEG
GETSLTPEEVNVANPYYNDWVSEYLVIEEPKHGYLTNSKLPGSKLLKFTPFQLKSGLIHY
NHDGTETTRDWFTVVAGAATLHKESAPSSIHVTITPVNDETPHLINNTGLEVWEGSLATI
TNNHLAAGDDDSGPNDIVFDISALSNGYVALKNETKTPIESFSQDDINRGLVIFVHTGMY
YSVLVVSIQY
NT seq
4714 nt
NT seq
+upstream
nt +downstream
nt
gttttatttcaagtccagacttcgaatatttttcattgaaaattcaatattcttcatttt
tctcagcttcgttctatggtgccagttacgtgtctgttccattacaagatgccagtagcg
acaccgatatcttcttccggttcaaaaccctacgtgctgacgctctcctcttccttgctg
ctggacctccagactactgcttggtcactcttcatggtggtgagataaaggtccgcatca
atttaggatctggagaagaagaactaacatcggttcctggtctgaagctcaacgacctct
tgtggcatgaaatagaaatacagaagattgattccgaactgacgttaaggatagatggaa
tacacactacttacttagatataaaaggacgctttttcgagttgaatgttaagtctggaa
tctttattggaggacttggtggtttcgacgacttgtttttggggaaccttcagaatttcc
gtgggtgtttagatgaatttttctttaacaacatcgacatcttgcggctggcagtcgatt
cggcagacaggctcggtgtttatggtgtcacgtgggactgtagtgacgaatttgaagcat
cttctcatcaacccatcagttttattgaagatgagtctttcgtggctctttcagctttaa
gtacgagaaacggaggatcggtgtcttttgatgtcaatacccagtctgaattagctgtac
tgttttacaactcaggaaatccttcaaaaaccgactttctggcagttgaaattatcagcg
gtaaactcactttatctgttaatgagggtaatggagtggttgtgctgacatcagacaagg
ctgtcaacgatggactttggcatcatgttgatacacagtttagcccaacctacgtggaac
tgaccgtagatggagaaagcaaaaacattaggcccgggcttggagaaaacaggttctttg
attttactgattacctgtacgtgggtggaattgaacctaagaggaaggcacgtgctctac
aacacggcttacagtctgttctattgggaggtgccaagagttctctggcagggtgcttga
agaacatcaagatcaataatcaagtgaggggtcacagagaggtagagatcagccggggcg
tccgttctgattgtgtttgggaatacccctgtcttcagaaaccttgcatcgaggaagctg
tgtgtttgcaggaaggttttgataactttcgctgcacctgtgacaaatctgtgtgtgttc
gtagtaacttcagttcgggttacaggcttttcaccaaatcttcacttcccgtggacatgg
aaatattgaccctcaacccactggaagtttctgaaggaggaaacgatttaataacatcaa
aacacatcaatatcgtgctagactatcaaaagtacggagtgagagaatccggtgttttgt
ttcatatagtggatccgcctaaacacggaacgttagagatagaaatatggaataaaatag
cagacaacatcttcaccctattggatctgtatactgataaagtgcggtacacacacgatg
gatccgaaaaccatagtgacgagtttgtcacagagctagaattccgcgctcggaattacc
gcttacccccgttcttagaagaacgtcacagatttgtatttcacattaaagtgtctcctg
tcaatgatcctcctcggttgatactcccacccagtaaagtgctgaggcttgccaagcaca
ctaagatagccttcacctcggacgtattacacacggaagatcctgataacgaggctagtt
cattggtttactcagtactcagtataaggactgacaatgaaggttttgtggaaaatgtac
gagacccaggaaaacctgtggacactttcacacaggaggaaataaacaacaaacaaatta
actacgtccatcgagggccagcgaacactcgtattgccctgagggtatctgacgggattg
aaacaggacagactatggtgctcagagtagcaacgtttgacttaatgttgtcactaataa
acaatacgggaatcgtacttccttacaattcttacgccattatcagcaatagcaacttga
ctttcgctacgaactctccagatcaagatctggagattcgttacgatgtaacaagactac
cacaacacggtaacattcagaagcgaagaaacaacgggcgttggcgaccagtgaatcact
tcacccagagacacctaaataaaggtaaagttagatacgtacacacttcgggaaaacctt
cccaagacgaatttaagttttcagtgtcctgcatggatataaaagtgtccacgatttatg
actttcgcatcatctttattaaagtgtctctgattgaagttagtaatgagaatttagtac
taaataaaataacggaagacatccttacctcggaccatttaaaatatcaaacttcgcccg
ttgaaactcccacgactaaaatacattatacaatcttaactcctccatcttatggccacc
tttttctcaccaaacctggagtaaaagaaccctggaagttagaggtgggttctgtcttca
ctcaagaagatattggaaacaagttcatcaagtataaattgctttggaaatcttattcag
ctattaatgacacctttcatttcaaagtagcctcgactggagttgctaccaaaccacaag
ttttctctgttatccacattccagtcgtcactggtgccatgatccaggttgaaaagctac
aagttctagaaggtgggcaggcagaagttaacaagggttacctgtacgtaaaaacaccga
caacagaaaccattatttacaacgttacagctcagccacaacacggtatattaagactaa
tgaactccgccctcacggttgtcgaagaggacaatccaaactcgttttcaaacgaagact
tagaagaaaaacggttgttgtacatccacgatgattcagaacacgataaagacaaggttc
gatttactgcattcgctgataactctgatgacgactttgtgtattatggaactctccaca
tcggagtgatgatgaagaatgataacccacccgttcgcagtatagataagacatttttcg
tcaaaactaacggcgagagaaagctgacctccaaagatctcaagtacgaggacttagata
ttgattccaaacctaccaatattcagtacactcgcagaggtattccaaatggtgcccttt
tccatactgattcgcttgatactcaggttttccagttcacgcaagatgacttggacaagg
aaagactaatattccgacataatgggccatcttatggtaaagccgtgctgtggattacag
acggacagttttacgtcacggggatattagaaatacaagcatcaggtccgttcattaacg
ttacaaaaaacactggtttaatagtgcagagaggcgacaccgggcgtattacaacaagga
acctcagcgtagaaactaacgttggctcaagcatgaacgacctcacttttaaagttgttt
ctcggccaagtcacggtgaacttctaattaacggaaatgtagttcaccagttccgataca
gagatttagagctaagcctactcgagtacgaaaatgataacagtcagagcttttctgatt
cattcgagttcttggcgtttgtggaagacgtcagtgtagatggaatattcagtattcaag
tctttcccgaaagcttctgggagtcactccaggtgctaagcaacaagacaatctacgtgg
acgagggtaaggccgttgttatagacccggcgtcgctgaacatcgctcacactaacatta
acccagctaacatatcttacatcatcacgatagatccccaaatgggatttattcgtgtta
acgaaaacaatacgtaccataacgtgaaaacaagtgacaagacgtccagacgaagattct
ctcaggctatgatcaatgaagggatcgtcgagtacgtacagacgaaaagtaacgtgtcct
ttgattatttcatatttgatgttacaaatggaataacaaccatgccaggtcttcagttta
ctatcagtattatatccaatgtgattcttcttctgactgggaacattaccgttgtcgagg
gcggagaaacttctctgacgcccgaagaagtgaatgtagccaacccttattataacgact
gggtatccgaatacttagtgatagaagaacccaaacacggctaccttacaaacagtaaac
tccccggtagcaagttactcaagttcacaccgttccagttaaaaagcggactgatacatt
acaaccacgacgggacggagacaacaagagattggtttactgtggttgccggggctgcaa
ccttacacaaggagagtgcccccagcagtattcacgtcacgataacccccgtaaatgacg
agactccacatctaatcaacaatactggattggaagtttgggagggttccttagcaacca
tcactaataaccatcttgcggctggggacgacgactctgggcccaatgacatcgtctttg
acatttccgctctgagtaatggttatgtggccttgaagaatgaaaccaagactccgattg
aatccttctctcaagatgacatcaacagaggattggttattttcgtccacacgggtatgt
actattcagtattggtagttagtattcagtattg
DBGET
integrated database retrieval system
