Limulus polyphemus (Atlantic horseshoe crab): 106478104
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Entry
106478104 CDS
T08968
Name
(RefSeq) thrombospondin-4-like
KO
K04659
thrombospondin 2/3/4/5
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04145
Phagosome
lpol04512
ECM-receptor interaction
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106478104
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106478104
09142 Cell motility
04820 Cytoskeleton in muscle cells
106478104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpol04131
]
106478104
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpol04147
]
106478104
00536 Glycosaminoglycan binding proteins [BR:
lpol00536
]
106478104
Membrane trafficking [BR:
lpol04131
]
Endocytosis
Phagocytosis
Opsonins
106478104
Exosome [BR:
lpol04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106478104
Exosomal proteins of colorectal cancer cells
106478104
Exosomal proteins of bladder cancer cells
106478104
Glycosaminoglycan binding proteins [BR:
lpol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106478104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
cEGF
COMP
DUF7630
Motif
Other DBs
NCBI-GeneID:
106478104
NCBI-ProteinID:
XP_022237345
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MELTTSMKEMRQHMDIQTRETKLLRDTLQRCEMCRITPPKITCQDNPCFPDVQCRDTSNG
FQCGSCPRGYKGNGVKCVPLVTCNDRPCFRGVRCHEREDGGYQCGSCPPGYTGNGINCRP
YDRCGDEPCWRGVQCFNTDSPPGYRCGPCPTGFTGNGTTCEDIDECDLAGPCHPAASCKN
TSPGFRCGPCPQGYTGRRVEGMGLEYAQNVRQLCLDVNECDDGNNGGCVDNSQCINTEGS
FTCGECIEGFVGNQTIGCSPNPGTCPDGTVCDGNADCELLRGKTTYRCKDNCPNIPNSGQ
EDADGDKIGDACDEDADGDGIVNDPVCRFIDADKDLVGDHCDNNVDRDHDGIQDNKDNCP
DYPNSDQLDTDEDGKGDACDFDKDNDGISDSEDNCALVYNPDQRDTNGTGVGDACRGDYD
GDNVPDHLDVCPDNRKVYATDFRAYQTVVLDPEGDSQIDPHWVIYNQGAEIVQTMNSDPG
LAVGFQAFGGVDFEGTFFVDTEIDDDYVGFIFSYQDNAHFYTVMWKKNSQTYWQATPFRA
VAEPGVQLKVVKSDTGPGEMMRNSLWHTGDTRNEVRLLWKDPRNVGWKEKTAYRWLLLHR
PKIGLIRLRIFEGASMVADSGNVFDNTLKGGRLGVFCFSQEALIWSDLVYRCNGKL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggagctgacaacttccatgaaagagatgcgccaacatatggacattcagacacgagag
accaagcttcttcgtgacacattacagaggtgtgagatgtgcagaataacaccaccaaaa
attacctgtcaggataatccgtgttttcctgacgtccagtgcagagatacatcaaatggt
ttccagtgtggttcttgccctcgtggctacaaagggaatggagtgaagtgtgttccattg
gttacatgtaatgacagaccttgcttccgaggagtgagatgccatgagcgggaagatggt
ggataccagtgtggatcctgtccaccaggttatactggtaatggaataaactgtcgaccc
tatgatcgttgcggtgatgaaccctgttggcgtggggtccaatgttttaacacggacagt
ccaccaggctacagatgtggaccttgtcctactgggtttactggtaacggcaccacatgt
gaggatatagatgagtgtgatctagcaggcccttgccatcctgcagcatcgtgcaaaaac
acatctccaggctttagatgtggtccatgtccccagggttacacaggtcggcgagtggaa
ggaatggggttagaatacgcccagaacgtccgacagctgtgtttagacgtcaatgaatgt
gatgatgggaacaacggcggctgtgtggataattcacagtgtatcaacaccgagggttct
tttacttgtggagagtgtatcgagggatttgttgggaatcaaaccattggttgcagcccc
aacccagggacttgtcctgacggtactgtctgtgatggaaatgcagactgtgaactattg
aggggtaaaacaacttatcggtgtaaggacaactgtccaaatataccaaatagtggacaa
gaagatgctgatggtgacaaaatcggagacgcttgtgatgaagacgcagatggggatggt
atcgtcaatgatccagtatgtcgctttattgatgccgataaggatttggtgggagaccat
tgtgacaataacgttgatagggaccacgatgggattcaagacaacaaggacaattgccca
gactaccctaatagtgatcaactagatacagacgaagatggaaaaggtgacgcatgtgat
tttgacaaagacaacgatggaatttcggacagcgaggacaactgtgctctagtgtataat
ccagaccaacgtgatactaacgggactggggtgggtgacgcttgtcgtggagattatgac
ggagataacgtaccggatcatctggacgtgtgtccagacaacaggaaggtgtatgctact
gactttcgggcctaccaaacagttgtcttagatccggagggggattctcagattgatccc
cactgggtgatttacaaccaaggagccgagatcgtccagactatgaatagtgatccagga
ctagcagtcggttttcaggctttcggaggagtggattttgaggggactttctttgtggat
accgaaattgatgatgattatgttggttttattttcagttaccaagacaacgctcacttc
tacacagtaatgtggaagaaaaactcccaaacttactggcaggctacaccttttcgggcc
gttgcagagccaggtgtccagttgaaagtagtgaagtctgatacaggaccaggtgagatg
atgcgaaactctttgtggcacacaggtgacacaagaaatgaggttcgcctcctttggaaa
gaccctagaaatgttggctggaaggaaaagacggcctacagatggttattgcttcacaga
cccaaaattggattaatcaggttacgtatttttgaaggagcgagcatggtagccgattca
ggaaacgtatttgacaatactcttaaaggtggacgtctcggagtattttgtttctcccag
gaagctcttatttggtcggatctggtttacagatgtaacggtaagttatag
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