Limulus polyphemus (Atlantic horseshoe crab): 106478335
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Entry
106478335 CDS
T08968
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lpol03037
]
106478335
Cilium and associated proteins [BR:
lpol03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
106478335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_6
TPR_19
TPR_14
TPR_16
TPR_8
TPR_7
TPR_9
ANAPC3
SNAP
TPR_11
ARM_TT21_5th
HAT_PRP39_C
ARM_TT21_4th
HEAT_Nup120
TPR_CcmH_CycH
TPR-S
TPR_10
ARM_TT21_N
PoNi_N
RPN7
Motif
Other DBs
NCBI-GeneID:
106478335
NCBI-ProteinID:
XP_013794327
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MEDIHLAPSDEDDLYSGYNDYHPALDMSTLQYDEGFQQAVRTSYGKRPPVTGKTPGTSRG
TTGMRVPGTSKAGPFRGITAVPSTSGRPVTGSQEGLARPMTAVRGAGYTSVGNRGQSGVF
DPLNQRSTSVSPLQFKDENSPEERVKQLEKKVTELMEESCLAADRKELKLSLDKAKEAAS
KERALTRLRDQLTTEVPPNMDLTYCVLFNLAIQYAANEMNTEALNTYQLIVKNRQFSNAG
RLKVNIGNIYFQMGSYPKAIKFYRMALDQIPTTHKDLRIKIMKNIGLAFVKLGQFTDAIT
SFEYIMAEKPDFRTALHLILCHYSLGDREKMKRSFQKLLEIPLEYVDDDDKYTATLDDPH
ANLILEAIKNDSLRKYERQRIQEAEWSILTASKLISPVLSSNFAEGYEWCVDQIKSSPYN
ELANDLDINKAVTYLRKREFTQSYRYFPSNIEIIEWLGAYYIESQVFEKAIKYFERAAII
QPNQVKWQLMVASCHRRSGNYQQALNTYKTIHRRFPDNIECLKFLVRLCTDMGLKEASEY
ATKLKKAEKAKELKEQRANSGSRPGSRRSSSRTSREGSASSNTSAPMYSPRNSNSSRSYQ
ATSARSVDSARKEFPLLESDEPYQPRQKELNTTYDDPLGPMEERPKTAARKKDADDDEFD
NEELGDDLLPE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaggatattcatttagctccttcagatgaagatgatctttactctggatacaatgat
tatcatcctgcacttgacatgagtactctacaatatgacgagggtttccaacaagctgtt
cgtacaagttatggaaaacgaccaccagtcacaggtaaaactccgggcacttctcgtggc
accactggaatgagagttccaggtacatcaaaagctggtccttttcgaggaatcacggct
gtaccgtccacttcaggtcgtcctgtgacaggctcgcaagaaggactagcacgacctatg
actgcagttagaggggcaggttacacttcagtaggtaatagaggtcagtctggagttttt
gatccacttaatcagcgtagcacatcagtgtcacccctccagtttaaagatgaaaatagc
cctgaagaaagagtcaaacagttagagaaaaaagtaacagagctaatggaagaaagttgt
ctggcagcagacaggaaagagttgaagctgtctttagataaggcaaaggaagcagcatct
aaggagcgagctctaactagactgagagaccaattaactactgaagtgccacccaacatg
gatttgacctattgtgtgctctttaacttagcgattcagtatgctgccaatgaaatgaac
acagaagctctaaacacctatcagttgattgtgaaaaatagacagttttccaatgcagga
cggctaaaggtaaatattggaaatatctactttcaaatgggaagttatccaaaggctatc
aagttttatcgaatggctttggaccagattcctacaactcacaaagatctaaggataaag
ataatgaaaaacataggattggcatttgttaagctgggtcagtttactgatgccattaca
tcctttgagtacatcatggctgaaaaacctgattttcgaactgcattgcatctcattctc
tgtcactattctcttggagatcgggagaaaatgaaacgaagttttcagaaactgctggag
attcctctggaatatgtggatgatgatgataaatacacagcaactttggatgatcctcat
gctaacttaatactggaggctattaagaatgattctcttagaaagtatgaaaggcaaagg
attcaagaggcagaatggagtattttgacagcatccaaattaatttcaccagttttatcc
agtaattttgctgaaggttatgaatggtgtgtggaccaaatcaagtcatctccgtacaat
gaactagcaaatgacttggacatcaacaaagctgtaacatatttgaggaaaagagaattt
actcagagctatcgttactttccatctaacatagaaattatagagtggctaggagcttac
tatatagaatctcaggtttttgagaaagctatcaagtacttcgagagggcagccataatt
caaccaaaccaagtcaagtggcaacttatggtggctagttgccatcgaagaagtggaaac
taccaacaagccttgaacacgtacaaaactattcatcgcaggttcccagacaatattgaa
tgtttgaagtttcttgttcggctctgtactgacatgggactgaaggaagcttctgagtat
gccactaaactcaaaaaagctgagaaggctaaagaactgaaagaacagagagctaatagt
ggaagccgcccaggaagtcgtcgtagtagtagtcgaacctcaagagaaggatctgctagt
agtaacacaagtgctccaatgtatagtcctcgtaacagcaacagctctcgcagctatcag
gccacttcagccaggtcagttgatagtgcccgaaaggagtttcctcttcttgaaagtgat
gaaccataccaaccaagacagaaagagctaaatacaacatatgatgatcccttgggccca
atggaggaaagaccaaaaactgctgcacgaaaaaaagatgcagatgatgatgaatttgat
aatgaagaactgggagatgacctactaccagaatag
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