Limulus polyphemus (Atlantic horseshoe crab): 106478338
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Entry
106478338 CDS
T08968
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106478338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpol03400
]
106478338
Enzymes [BR:
lpol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
106478338
DNA repair and recombination proteins [BR:
lpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
106478338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
106478338
NCBI-ProteinID:
XP_013794330
UniProt:
A0ABM1S1X5
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MARKGSTARKAKSKVTHVEKTQSSEQNTTSNTRKRKRNESSDVEVSESKYNKSDKSLKEE
ATAAESSSATPAEKNAFYRISSWNVNGVRAWLDKKGLDFIKQENPDIFCIQETKCSDDKL
PANVKNVTGYKTYPLSGDKDGYSGVCMFSKKQPVSVKYGIGIDKHDKEGRVITAEYDEFF
LVAAYVPNAGKKLVRLDYRQDWDKDFCKYLKTLDAVKPVILCGDLNVAHQEIDLANPKTN
KKNAGFTQEERDGFSSLLNEGFIDSFRTLYPNAKGAYTFWTYMMNARAKNVGWRLDYFVL
SSRLRSKMCDSIIHKDILGSDHCPITLTIAF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaaggtagtactgcaagaaaggctaaaagcaaggttacacatgttgaaaaa
actcagtcaagtgaacaaaacactaccagtaacacaaggaaaaggaaacgaaatgaaagt
agtgatgtagaagtttcagaatctaagtataacaaatctgacaaaagcctgaaggaagaa
gctactgcagctgagtcctcttctgccacacctgcagaaaaaaatgcattttatagaata
tcttcatggaatgtaaatggtgtcagggcatggttggataaaaaaggtttggacttcata
aagcaggaaaacccagatatcttctgtattcaagaaacaaagtgttcggatgataagctt
cctgcaaacgtaaagaatgtaacaggatataaaacctatcctttatctggtgacaaggat
ggatactccggtgtatgcatgttttccaagaaacaaccagttagtgtcaaatatggtatt
ggtatagacaaacatgacaaggaaggccgagtcataactgcagagtatgatgagtttttc
ttagtcgctgcatatgtgccaaatgctggaaaaaagttagtgagactggactacagacaa
gattgggacaaagatttttgcaagtatctgaaaactctagatgctgtgaagccagtcatt
ctctgtggagatctaaatgttgcacaccaagaaatagatcttgctaatccaaagacaaat
aagaagaatgcaggatttactcaagaagaaagagatggattctcgtctttattgaatgaa
gggtttattgacagtttccgaacactttatccaaatgctaaaggagcctatactttttgg
acatacatgatgaatgctagggcaaaaaacgtaggctggagactggattactttgtattg
tcaagtaggctccgctctaaaatgtgtgatagtatcattcataaagatatccttggaagt
gaccattgcccaataacacttactatagctttttaa
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