Limulus polyphemus (Atlantic horseshoe crab): 106478412
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Entry
106478412 CDS
T08968
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106478412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpol03021
]
106478412
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106478412
Transcription machinery [BR:
lpol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106478412
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106478412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_4
zf-CCCH_12
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCHC_2
Motilin_ghrelin
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
106478412
NCBI-ProteinID:
XP_013794409
UniProt:
A0ABM1S251
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MEEIVADVDGIRFDIENALEQQLGALPLPFPGMDKSGAAVCEYFTRGLCSKAGACPFRHV
RGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPNCRHRHTRRVICINYLCGFCPEGSNCKYMHPKFDLPMQDSTQQG
KKQSIVCHYCGETGHKAVACLKMPPELKEEHRHNHIQIIQNIKAQSDLQMQEGQKAFRPL
DQVTCFKCGEKGHYANKCPKGHLAFLSSALQSTQQSEDN
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaggagattgtagcagatgtggatggtataaggtttgatattgaaaatgccctggaa
cagcagcttggagctctcccattaccttttccaggaatggacaagtcaggagcagctgtt
tgtgaatattttacaagaggattgtgtagcaaagcaggggcatgtcctttccgtcatgtt
cgtggtgatagaacagttgtttgtaagcactggctcaggggactttgtaagaagggtgat
cagtgtgaatttttgcatgagtttgatatgacaaaaatgccagaatgttatttttattcc
agatttaatgcttgcagtaacaaagaatgtccattcttgcatattgatcctgaagctaag
atcaaagattgtccgtggtatgacagagggttttgccggcatggaccgaactgtcgacat
cgccacacgagaagggtaatatgtatcaactatctttgtggattctgtcctgaaggatca
aactgtaaatacatgcatcccaaatttgatcttcccatgcaagactcaactcaacagggg
aaaaaacagtcaatagtttgtcactattgtggtgagactgggcataaagcagttgcttgt
ttgaagatgccaccagagttgaaagaagaacatcgtcataaccatatacagatcatccaa
aatattaaagcccaatcagacttacagatgcaagaggggcagaaggcatttcgaccacta
gatcaggtaacgtgcttcaaatgtggagaaaaaggtcattatgcaaacaagtgtcctaaa
ggtcaccttgcctttctcagctcggctttgcagagtacccaacaatctgaagataactga
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