Limulus polyphemus (Atlantic horseshoe crab): 106478522
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Entry
106478522 CDS
T08968
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpol04121
]
106478522
Ubiquitin system [BR:
lpol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
106478522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Pterin_bind
SWIM
Motif
Other DBs
NCBI-GeneID:
106478522
NCBI-ProteinID:
XP_022237850
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MKDISPSPYFHTPYYYKKVSDASKSVKKFKVELVTNLLAEGQHLSLVELAAKEVAANIPF
EVVERVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGEHLFKARAVKELL
QIGFHLSATVLPSQNPPICKGSYSVAVTFDRCRITSCTCTCNSAASWCSHVVAVCLQRIH
QPNQVRLRAPVSESLSRLHREQLQKFAQYLISELPQQILPTAQRLLDELLSNQQTAINTY
CGAPDPTAGASASELTTWCLDEGTLHENIRKILIKLCVPSPMVFSDVNYLSSTAPPAAAE
WSSLLRPLRGREPEGIWNLLLIVREMFRRSDRNAIPLLQILTEEVLACDQILVWWFNTKV
SLHMGSSGHGSRGSVHSNTHASQQACSSLCDEVVILWRLAGLNPALSPQERQNFFYQLHE
WHLKTLERVWKVRNNSGSGASGIKRSDIDVFTGFKPAMEACLLDWSDYPIEGVTYTGKGA
SRWYVPYTQGRGSDHSVSCMTSKPTDFCHINNRRGRSVDVSSCVEGRLHSRLAPPVHRCS
QNSGKICSESNRSSLSSEGFCENETEPVESYTQFSGPIPSETKVPITVNIQPPYGESMSN
DSNGNLQLHSCEDSSRKTEALCASIAPKVNGELSDLTLKSSCVDETADSSNPPEVGIANE
LEKSSPEEDSDWSNPPEDNCQAGKSRTQGDENSEHNESQQSSDEYQVYYYNPQAILPSPE
KVPETKTESERFTVSVKKIEDPLEVLFARAEALHAHGHTQEACKLAVKLAEELLANPPNF
VVDMPAQPNRGKRNRRFNPACHQVSLHASATLSKAAFLCSVLGENPDHSHLAFRVGLFGL
ELARPPASTKALEVKMANQEQDLVGLLKRIMLTDAELKVVRERAEQLRSGQLQSRGEALL
PLMLSSFIFDALVLCGLSSGDVTSVSSKSVTDEELGFEAAVAALGLKANVSEADHPILCE
GTRRQRGELALTLLVHYKDDQQKLSKIMNKLLDKEDSQSHKNQVQSTYYTPPSCTDSTTV
LQGSQSLENGEGENNKTAVLFGERIDDEQVQDETGNVVSAEDIVSRRKATSHLGLPKSHV
KTSGARAKESHRHRNRERGDSEGASSPGWEEDYKAWEAKFRCTNFHTSKKHSAGMASIDS
SAPETTSSDNSPTVVRRSTWIKTGGPGSDSGSSGESSNSFVSSSSGDKGTRNKNRDSESP
SQVSRFGGAFPAGDSLNRHITTTVKPTRFKGKRAYPNVPNQPSEASAHFMFELAKTVLTK
AGGNSSTAVLFTQPSAGQNHRGPHRALHICAFQIGLYALKLHNAVSPNWLSRTYSSHVSW
ITGQAMEIGSLAIKDILIDSWEGHLTPPEVASLADRASRVRDPAMVRAAAELALSCLPHA
HALNPNEIQRALIQCKEQCVEMLERACLAVESAAKGGGVYPEVLFDVAHRWYELYEETLQ
GQQDHISESHGFSADMTFGHSNTEQSGTPVSSAAETLAMLTTCQVEGMVTTTPTVQVFPQ
LSCQPVSYSLPYPAPPYGYIQGVPSPFPHGPVPLHPAYLPPPPTYAYPALASASYYPTTY
TSTVAGAVHVRHTTPGLYTGQLLGVPVTQAAMTQPRPVLPVSPSPPPSVPPPQQPQVHNP
ISQLNQRQLNYLLAAYRVGMLAMETLARRVHDDRPQAKYARTPPYGEDVKWLLGVAKKLG
TSYLHDFCICTVNSVASPFVLHDLVLDAAHYLSLSSSSPMAQGLRSHLLTPLIQKCQQMF
IACTHFKMYHITPAEYEEFVNIIRKARSAFQLTPGGMVQFSELLQSLRRSKSCKKELWQK
ISSVLVTSAI
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatttctccatctccatactttcataccccctactactataaaaaagttagt
gatgcctctaaatcagttaagaaattcaaagttgagctagtcacaaatctacttgcagaa
ggacagcatttgtctctggtggagctagcagcaaaggaggttgcagctaacattcccttt
gaagtcgtagagagagtctatcctcctgtaccggaacagttgcaactgcgtatagcattc
tggagttttcctgaaaatgaagaagacattaggttatattcttgtttggcaaatggaagt
gcagatgaattccaaagaggagagcatcttttcaaagcaagagctgtaaaagagctacta
caaatagggtttcatttaagtgcaacagttctcccttctcagaacccaccaatttgtaaa
ggctcgtatagcgtagctgtaacatttgatcgttgtcgaattacatcctgtacctgcaca
tgtaatagtgcagcatcttggtgttcccatgttgttgctgtttgtcttcaaagaatacat
caaccaaaccaagtacggcttcgagctccagtgtcagaatctctatctcgcctccacaga
gagcagcttcagaaatttgctcagtacctgatcagtgaactccctcaacagattttgcca
acagctcagagactgttagatgagcttctttcaaaccagcaaactgctattaacacatac
tgtggtgcaccagatcctactgcaggagcttctgctagtgaactgaccacctggtgtcta
gatgaaggaacacttcatgagaacattcggaaaatccttattaaattgtgtgttccatca
cccatggtttttagtgatgtaaactacttgtcctccacagcaccaccagctgcagctgaa
tggtccagtttactcagacctttacgaggtcgtgaacccgaagggatatggaacttgctt
ctaattgtacgagagatgttccgtcgaagtgatcgcaatgcaattcctttattacagatt
ctaactgaagaggttcttgcttgtgaccagattttggtgtggtggttcaacaccaaagtg
tcacttcacatgggtagtagtggacatggcagccgaggaagtgttcatagtaacacacat
gcttctcaacaagcctgtagcagtttatgtgatgaagtggtgattctctggagacttgct
ggccttaaccctgccttgtctccacaagaacgtcagaatttcttttaccagttgcatgaa
tggcatctaaaaacattggaaagagtgtggaaggtgagaaacaatagtggtagtggagca
agtggcatcaaacggtctgatattgatgtctttactggctttaaaccagcaatggaagct
tgtctgttggattggagcgactatcccattgaaggtgtcacttacacaggaaaaggtgca
agccgttggtatgttccctatacccaaggtcgtggctctgatcactctgtttcttgtatg
acttcaaaaccaacagatttttgtcatattaataatcgaagaggacgatcagtagatgta
agttcatgtgttgaaggacgtcttcatagcaggttggctcctccagttcatcgctgttca
cagaattctggaaaaatatgcagtgagagcaatcgaagctccttgagcagtgaggggttt
tgtgaaaatgaaacagagccagtagaaagttatactcaattttctggacccataccatct
gaaacaaaggttccaatcactgtaaatattcaaccaccttatggtgagagcatgtctaat
gattcaaatggtaacttacaacttcattcatgtgaagattcttccagaaagacagaagcc
ctatgtgctagtattgcacctaaagtcaatggtgagctttcagatctgacattaaagagc
agttgtgtggatgaaactgctgattcttcaaatcctccagaagttggcatagctaatgaa
cttgagaaatcctccccagaagaagattctgactggtcaaatccacctgaagataactgt
caagctggaaagtcaagaactcagggtgatgaaaacagtgaacataatgaatctcagcag
tccagtgatgagtatcaagtatactactacaatcctcaagccatcctgccaagccctgaa
aaggttccagaaacaaagacagaatcagagcgcttcactgtgtcagtgaaaaagatagaa
gatccacttgaggtgttgtttgctcgagcagaagctcttcatgcacatggtcatacacag
gaagcttgcaagttagcagtgaaactagcagaggaactactagctaaccctccaaatttt
gtggttgatatgcctgctcaaccaaaccgtggcaaaagaaatcgtcgttttaatccagca
tgtcatcaagtcagtctacatgcatctgctacattgtccaaggctgcctttctgtgctca
gttcttggagaaaatcctgaccattctcatctagcctttcgtgttgggctttttggatta
gaacttgcaagacctcctgcttccaccaaagctttggaagttaaaatggcaaatcaagag
caagatttggttggtttgttgaaacgtatcatgctaactgatgctgagctgaaggtggtt
agagaacgagctgaacagttacggtcaggacagcttcagtcaagaggggaagcacttcta
cctctaatgttgtccagtttcatatttgatgcattagttctgtgtggtctttcatcaggt
gatgtaactagtgtttcgagtaaatctgtcactgacgaggagttaggatttgaagcagca
gttgcagctctaggattaaaagccaatgtgtctgaagctgaccatccaatcctatgtgaa
ggtacacgtcgacaaaggggagaactggcccttaccctacttgttcattataaagatgat
caacaaaaactttcgaagattatgaacaagcttctagacaaggaagattcccaaagccat
aaaaatcaagtacaaagtacttattacacaccaccatcatgtacagacagcactacagta
cttcaaggatctcagtctttggaaaatggagaaggagaaaataataaaactgcagtgctc
tttggtgaaagaattgatgatgaacaagtgcaagatgaaactggaaatgttgtatcagca
gaagatattgtttctcgaagaaaggctactagtcatttgggcttaccaaaaagccatgtt
aaaactagtggagctcgtgcaaaggaatcccatcgtcacagaaatcgtgaacgtggtgat
agtgaaggagcttctagcccaggctgggaagaagattataaggcatgggaggcaaaattt
cgttgtaccaatttccacactagtaaaaaacattctgctggaatggccagtatagatagt
agtgctcctgaaactacttctagtgacaattcaccaacagttgtgagaagaagtacctgg
ataaaaactggagggcctggaagtgacagtggcagtagtggggaaagtagcaattctttt
gtttccagttcttctggtgataaaggaactcggaacaaaaacagggattctgaaagccca
tctcaagttagccgttttggaggagcttttcctgctggagacagtttaaatcgacatata
acaactactgtgaaaccaacaagattcaaaggtaaaagagcatatcctaatgttccaaac
caaccaagtgaagcctctgctcatttcatgtttgaactggccaagactgtacttactaaa
gcaggaggaaacagtagtacagctgtgctgtttacacaaccatctgcaggtcagaaccat
agaggcccacaccgtgctctccacatatgtgctttccaaattgggctgtatgctcttaaa
ctacataatgctgtttctcctaactggctgtcccggacctactcttcacatgtgtcatgg
attactggtcaggctatggagataggtagcttagccatcaaggacattcttattgactct
tgggaaggtcatctaacacctcctgaagtagcctcccttgcagacagggcatcaagagtc
agagatccagcaatggttagagctgcagctgagctagctctatcctgccttcctcatgca
catgcacttaaccctaacgaaattcagcgtgctctcatacaatgtaaagaacagtgtgtc
gagatgctggagcgtgcatgtctggcagtggagtctgcagcaaagggaggaggagtgtat
cctgaggttttatttgatgtagctcacaggtggtatgaactctatgaagaaacgctacaa
ggccagcaagatcacatctcagaatctcatggtttttctgctgacatgacttttggacat
tcgaatacagagcagtctggaacccctgtgtcttcagctgcagagacattagccatgttg
actacttgccaggttgaaggaatggttaccacaactcccacagttcaggtctttccacaa
cttagttgtcagcctgtatcttattcccttccataccctgcacctccttatggctatatt
caaggtgtccctagtccatttcctcatggccctgtaccccttcaccctgcatatcttcca
cctccccctacttatgcttatccagcactggcaagtgcttcttactatcctacaacctac
acatcaacagtagcaggtgcagttcatgtacgacacactactccaggactctatactgga
cagctgttaggtgtgccagtgacacaggcagcaatgacccaaccacggccagtcttgcca
gttagtccaagtcctccaccttctgtccctccacctcagcagcctcaagttcacaaccca
atatctcagctaaatcagcgacagttgaactacctgttagcagcatatcgtgttggaatg
ttagctatggagaccttagcccgtagagtacacgatgacaggccacaggctaaatatgca
cgcacccctccatatggtgaagatgtgaaatggcttcttggagttgctaaaaaattgggg
acatcatatcttcatgatttctgtatctgcacggttaatagtgttgccagcccttttgtt
cttcatgacttggttttggatgcagctcactatctctctctgtcaagttcatcccctatg
gctcaaggcctaagatcccatctcctcacaccccttattcagaaatgtcaacagatgttt
atagcatgcactcacttcaagatgtaccacatcacacctgctgaatatgaagaatttgtc
aacattattcgaaaagcaaggtcagcttttcagctcaccccaggagggatggttcagttt
tcagagctgttgcagagtctgcgtcgctccaagtcctgcaaaaaagaactctggcagaaa
atttcaagtgttcttgttacatcagccatttga
DBGET
integrated database retrieval system
