Limosilactobacillus pontis: LP475_01105
Help
Entry
LP475_01105 CDS
T07022
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpon
Limosilactobacillus pontis
Pathway
lpon03420
Nucleotide excision repair
lpon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LP475_01105
03430 Mismatch repair
LP475_01105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpon03400
]
LP475_01105
Enzymes [BR:
lpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LP475_01105
DNA repair and recombination proteins [BR:
lpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LP475_01105
MMR (mismatch excision repair)
Other MMR factors
LP475_01105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
AAA_30
SLFN-g3_helicase
NACHT
DEAD
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QFV00425
LinkDB
All DBs
Position
242483..244798
Genome browser
AA seq
771 aa
AA seq
DB search
MGEREERQQEQSRVDRVVREIKRQVAETTTAVEAAHKETRAVERNYSENASINRYEVDDI
AESRSMLEQQRQLVSRAAESETILKHQLATLKGLQGSPYFGRIDIVDPGESEPESLYIGT
ASLMNDDKTDFLVYDWRAPIAGVYYNGTLGKVSYKTPAGTQQTELVKKRQFTIKDGQITN
MFDTNETVGDELLQAALGEQNDQYMHNIVATIQQEQNDIIRDTHSDLLLVQGVAGSGKTS
AILQRIAYLLYHSRAVLNADQIVLFSPNNLFSHYISEVLPSLGERNMRQVTLEGFVRRRF
EGLKVEGLFERYETRQAHPDADQTIANFMEGTAVMDQVRQYVAKLTDADLQFADLRFNGR
AFFSADHIREVYEALPSAMHLADRMVQLKNKLIRELQHRVRTEAKQDWVAKELDDLTTQQ
LHRLYGKKTVDDFADEDAQYTYLSRRWAKRRLRIIADAIYNNYFLDFYNQYERFLRRVEV
PDSISTRDWTNMILTYQDEIEFHRLELMHAAPLMYLRDLITGSGQNRSFQYVFIDEMQDY
SLAMMVYLRHAFPQACFTVLGDSEQALFKPLQLPETMLKELSSVLDAKHPNLIALRRSYR
STKEIADFAKALLPDGDQIISFTRHGATPHLLVRYSAESTRQALLDEVATLRQDNETVAI
LTKNRQQAQEVYQTLHRQKVADLHLLSERDSALPTGILVLPIYLAKGLEFDAVMAYDVSA
ANLANTDAVGMVYTMASRAMHQLTLLSNGPVSPALNAKACQKLVIEHEIVK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacgagaagaaagacaacaggaacaaagccgtgtcgaccgggtagttagagag
atcaaacgccaggtggctgagacgaccactgccgttgaggccgcccacaaggaaacccgg
gcggtcgaacgcaactacagtgaaaacgcctcgattaaccgttacgaggttgatgacatt
gccgagtcgcggtcgatgctggagcaacagcggcaactggtctcccgggccgccgagagt
gagacgatcctgaaacaccagttggcaacactaaagggcctgcaggggtcgccgtacttc
ggccggatcgacattgtagatcctggtgaaagcgagccggagtcactctacatcgggacc
gcttcactgatgaacgacgacaagaccgacttcttggtctacgattggcgggccccgatc
gcgggggtctactacaacgggaccctcggcaaggtcagctacaagacgccagccggcact
cagcagactgagttggtcaagaagcggcaatttaccatcaaggacggccaaatcaccaac
atgttcgacaccaatgagacggtcggtgatgagctcctccaggcggccctgggtgaacag
aacgaccagtacatgcataacatcgtggccacgattcaacaggagcaaaacgatatcatc
cgcgacacccacagtgacctcctcctggtccagggggttgcggggtccgggaagacctcg
gccatcctacaacgaatcgcctacctcctctaccacagccgggccgtcctaaacgccgac
cagatcgttctttttagtcccaacaacctcttcagtcattacatctccgaggtcctaccc
agcctgggtgagcgcaacatgcgtcaggtgaccctggagggcttcgtgcgtcggcgcttc
gagggcttgaaggtcgaaggtctatttgaacgttacgagacgcgccaggctcacccggat
gccgaccagacaatcgccaacttcatggagggaacggccgtgatggaccaggtccgccag
tacgtggccaagctgaccgatgccgacctccagtttgcagacttgcgcttcaatggccgg
gccttcttcagcgccgaccatattcgggaggtctacgaggccctgccgtctgccatgcat
ctcgccgaccggatggtacaattgaaaaataagctgattcgcgagctccagcaccgggta
cggaccgaggccaagcaggattgggtggctaaggagctcgacgacctgaccacccagcag
ctccaccgtctttacggcaagaagacggttgatgactttgccgacgaggatgcccagtac
acctacctgtcccggcggtgggccaagcgtaggctgcggatcattgcggatgccatctac
aataactacttcctcgacttttacaaccagtacgaacgttttctccgtcgggtggaggtg
ccggattcgatcagcacccgggactggacaaacatgattctgacctaccaggacgagatc
gagtttcaccggctagaactgatgcacgccgccccgctgatgtacctgcgtgacctgatc
accggcagcgggcagaaccggtccttccagtacgtcttcatcgacgagatgcaggactac
tccctggcgatgatggtttatctgcgtcacgccttcccccaggcctgcttcaccgtcctt
ggtgatagtgagcaggccctcttcaagcccctccagctaccggagacgatgctcaaggag
cttagcagcgttcttgacgccaagcacccgaacctgatcgccctgcggcggagctaccgg
tcaaccaaggagatcgccgacttcgccaaggccctcctgcccgatggtgatcagatcatc
tccttcacccggcacggcgccacgccacatctgctggttcgctactcggcggagagcacc
cggcaggccctgcttgatgaggtggccacactccgccaggacaacgagacagtggcgatc
ctgaccaagaatcgccagcaggcccaagaggtctaccagaccctccaccggcagaaggtg
gcggatcttcacctactcagtgagcgagacagtgctctgccgaccgggatcctggtcctg
ccgatttacctggccaaggggctagaatttgatgctgtcatggcctacgatgtctcggct
gccaatctggctaacaccgatgcggtcgggatggtttacacgatggcctcacgggcgatg
caccagctgaccctgctgagcaacggtccggtcagtccggctttgaacgctaaggcctgt
cagaagctggtaattgagcacgaaattgtcaaataa
DBGET
integrated database retrieval system
