Limosilactobacillus pontis: LP475_02755
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Entry
LP475_02755 CDS
T07022
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lpon
Limosilactobacillus pontis
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpon03019
]
LP475_02755
03009 Ribosome biogenesis [BR:
lpon03009
]
LP475_02755
Enzymes [BR:
lpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LP475_02755
Messenger RNA biogenesis [BR:
lpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LP475_02755
Ribosome biogenesis [BR:
lpon03009
]
Prokaryotic type
rRNA helicases
LP475_02755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DUF6305
AAA_30
SMC_N
DUF2608
CMS1
Motif
Other DBs
NCBI-ProteinID:
QFV00716
LinkDB
All DBs
Position
580167..581540
Genome browser
AA seq
457 aa
AA seq
DB search
MTENKFKNFNLPPYLIKAVQAINFYQPTPIQERVIPDILKGQSVVGQSATGSGKTHAFLL
PIFARIDPEVQAVQAVITTPSRELAYQIYAAAKQLNKFAPQSLTIHNYVGGTDKQHQLDQ
LSRKQPQLVIGTPGRVLDLIKSQALDIHTATMFVVDEADMTLDMGFLEQVDQIVSNFPED
LQMMVFSATIPKKLRPFLKKYMANPEVEEIPTQAVINPDVQNWLMSTKGQDKNQLIYRLL
TMGEPYLALVFANTKERVEELTHYLEEQGLKVAMIHGGLEARRRKRTMRQIRNLDYQYVV
ATDLAARGIDIDGVSLVINDDIPTDLEYFIHRVGRTGRNGMTGTAITLYAPAEDDLIAKL
EERGIKFVPKEPRGGRLVTTHDRNRRKNYRRKRDELDPSMKGFVKKTKRRVKPGYKKRIK
RAIREDEQQKHKLELRHKIRKAKRQRQRQHRRERNAR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaataagtttaagaactttaacctaccaccgtacctgatcaaggcggtccag
gcgatcaacttctaccaaccgacaccgatccaagagcgggtcatcccggatattctgaag
gggcagagcgtggtcggccagtcggcaaccgggagtgggaagacccatgccttcctcctg
ccgatctttgcccggatcgatcctgaagttcaggcggttcaggcggtgatcaccacgccg
agccgggagctagcctaccagatatacgctgccgctaagcagcttaacaagtttgccccc
cagtccctgactattcataactacgtcggcgggaccgacaagcagcaccagctcgatcag
ctatcccgtaagcagccccagttggtgatcgggacaccggggcgggtacttgacctgatc
aagagccaggccctagacattcacacggcgacgatgtttgttgtcgacgaggccgatatg
accctggacatgggcttcttggagcaggttgaccagatcgtcagcaacttcccggaggac
ttgcagatgatggtcttctcggcaacaattcctaagaaactgcggccgtttctgaagaag
tacatggccaaccccgaggtcgaggagatcccaacccaggcggtcatcaaccccgatgtg
cagaactggctgatgtcaaccaaggggcaggataagaaccagctgatctaccggcttctg
acgatgggtgaaccttacctggccctcgtctttgccaacaccaaggagcgggttgaggag
ttgacccactacctggaggaacagggactcaaggtcgccatgatccacgggggtctggaa
gcacgtcggcgcaagcgcaccatgcgccagatccggaacctggattaccagtacgtggtc
gccaccgacctggccgcccggggaatcgacatcgacggggtttccctggtaatcaacgat
gacattccaaccgacctggaatactttattcaccgggttggtcggacgggtcgtaacggg
atgaccgggacggcgatcaccctctacgccccggctgaggacgacctgattgccaagctg
gaagagcgcggaatcaagtttgttcccaaggaaccacgtggcggccggctggtcactacc
cacgaccggaaccggcggaagaactaccggcgtaagcgcgacgagctggacccgtccatg
aagggctttgtcaagaagaccaagcgccgcgttaagccgggctacaagaagcggatcaag
cgggctatcagagaggacgagcagcaaaagcataagctcgagctccgtcacaagatccgc
aaggccaagcggcagcgccagcggcaacacaggcgggagcggaatgcccgttga
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