Limosilactobacillus pontis: LP475_03385
Help
Entry
LP475_03385 CDS
T07022
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lpon
Limosilactobacillus pontis
Pathway
lpon03030
DNA replication
lpon03430
Mismatch repair
lpon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LP475_03385 (holA)
03430 Mismatch repair
LP475_03385 (holA)
03440 Homologous recombination
LP475_03385 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpon03032
]
LP475_03385 (holA)
03400 DNA repair and recombination proteins [BR:
lpon03400
]
LP475_03385 (holA)
Enzymes [BR:
lpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LP475_03385 (holA)
DNA replication proteins [BR:
lpon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LP475_03385 (holA)
DNA repair and recombination proteins [BR:
lpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LP475_03385 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
GspL_M
AAA_lid_RFC1
Motif
Other DBs
NCBI-ProteinID:
QFV00818
LinkDB
All DBs
Position
686259..687293
Genome browser
AA seq
344 aa
AA seq
DB search
MDITELSQQLKKASPAPIYLVLGTQQALQQQALDLFLTLIPESERVMNVGRYDMETTPVA
TALDDAMSAPFFGERRLVVINKPYFLTGEKKRGKIDHDLDSFKRYLAQPEMTTTLVILAP
YEKLDGRKGIVKTLKRAAVTISAAPLNEQQARQQVVGRLMGAGFQIDQAAVDELVRRTNA
DYGLMIANLAKLKLLAYQDKHITQAQVAALVPQSLDENVFDLVTAVLRHDQVQALDLYHQ
LLAGQQQPLRINAVLVGQFRLLIQLKVLSRRGLSQGNLAMQLNVHPYRVKLGLQTARRFS
LLALENAYLGLIRIERALKTTQRDPALLFQLFMLQYAHQAKVAN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtggacattaccgaactgtctcaacaactaaagaaggcgagcccggcgccaatttatctg
gtactgggaacccagcaagccttacaacaacaggcccttgatctgtttttaaccctgatt
ccggagagcgaacgggtgatgaacgttgggcgttacgacatggagacaacgccggtggct
acggcgctagacgacgcgatgtctgcgcccttcttcggggaacgtcggttggtcgtaatc
aataagccttattttctgactggtgagaagaagcgggggaagatcgaccatgacctcgac
tcgtttaaacgctatctggcccagcccgagatgaccaccaccctagttattctggccccc
tatgagaaactggacggccgtaagggaatcgttaagaccctcaagagggcagcggttacc
atcagcgcggccccgttaaacgagcagcaggcccgtcaacaggtggtgggacgactgatg
ggtgcgggttttcagattgaccaggcggcggtcgatgagctggtgcggcggaccaacgct
gactacggattgatgattgccaacttggccaaactcaagctccttgcgtatcaggataag
catatcacacaggcacaggtggcggctctggtgccacagtcgcttgacgagaacgtcttc
gacctggtgacggctgtcctccgtcatgaccaggtgcaggctctcgacctctatcaccag
ctgctggccggtcagcagcaaccattacggatcaatgcggtcctggtgggtcagtttcgg
ttgttgattcagctgaaggtgctaagtcggcggggcctcagtcaggggaacctggccatg
cagttgaacgtgcacccgtaccgggttaagctgggactgcagaccgcccgtcgtttctcc
ctgctggccctggaaaatgcttatctcggtctgatccggatcgagcgggcactcaagacg
acccagcgtgatccggcactgctgtttcaattattcatgctccaatatgcccaccaggct
aaggtggccaattaa
DBGET
integrated database retrieval system
