Limosilactobacillus pontis: LP475_04410
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Entry
LP475_04410 CDS
T07022
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lpon
Limosilactobacillus pontis
Pathway
lpon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LP475_04410 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpon03019
]
LP475_04410 (recQ)
03400 DNA repair and recombination proteins [BR:
lpon03400
]
LP475_04410 (recQ)
Enzymes [BR:
lpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LP475_04410 (recQ)
Messenger RNA biogenesis [BR:
lpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LP475_04410 (recQ)
DNA repair and recombination proteins [BR:
lpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LP475_04410 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DEDD_Tnp_IS110
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QFV01005
LinkDB
All DBs
Position
complement(894121..895914)
Genome browser
AA seq
597 aa
AA seq
DB search
MATPTEILHTNFGFDHFRDGQEQVIKQVLEGHNTLAVMPTGGGKSLCYQIPALINPGVTI
VVSPLLSLMKDQVDSLRQNGIAAAALNSATPREEVNPILRSAYNGEIKLLYVTPERLAMD
YFQYQLGFLNINLVAIDEAHCISQWGHDFRPAYRQLNDAIQRLKTHPAILALTATATPQV
QQDIGDQLGIPEDNFVITSFARPNISFAVAHPHQGIRQYILKYLTAHQGEAGIIYANTRK
RVESLTAFLNEHGIQAAMYHAGMTAEDRAQVQDDFQFDRVPVIVATNAFGMGIDKSNVRF
VLHATSAKNLESYYQEAGRAGRDGLPSEAVMLYHANDIQQYRWFIDQSTADDEYREVQYE
KLQAVTAYANTPRCLQQQIVSYFGQECEPCGHCSNCTDDRQLEDITAMAQAVIAVVKELH
GRFGKSLVAKVVTGSHDQRINQLHADQLEHYGALKLSQQAAGALVDYLLATGYLELDGGQ
YPVVKIAKPGWRVLDGEATVQRRSEPQPTRSSTTVDETPEQAALFELLRKQRRKLADDQG
VPPFMIFSDRTLHDMARLQPQTPADFLTVNGVGQAKLKKYGQIMMDEIGAYLSGNTD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccaacagaaatcttacacaccaacttcggctttgaccacttccgcgacggt
caggagcaggtcatcaagcaggttttggaaggtcataacaccctggcagtgatgccgacc
ggtggggggaagtccctgtgctaccagatcccggccctgatcaatcccggggtgacgatc
gtcgtctcacccctcctatccctgatgaaggaccaggtcgactcgctccgccagaacggg
atcgccgccgcggccctcaacagcgctaccccgcgtgaagaggtcaacccgattctgcgc
agtgcctacaatggcgagatcaagctcctctacgtgaccccggagcggctggcgatggat
tacttccagtaccagctgggctttctcaacattaacctggtggcaatcgacgaggcccac
tgtatctcccaatgggggcacgacttccgcccggcctaccgccagctcaacgacgccatc
caacgcctcaagacccatccagcgatcctggccctgactgccaccgctacgccccaggtc
cagcaagacatcggcgaccagctgggaatccccgaagacaactttgtcatcaccagcttt
gcccggccgaacatcagctttgcggtggcccacccgcaccaggggatccgtcagtatatc
ctcaagtacctgacagcccaccagggtgaggccgggatcatctacgctaacacccgtaag
cgggttgaatcgctgactgcctttctcaacgaacacgggatccaggcggcaatgtatcat
gccgggatgacggcggaggaccgggcccaggtccaggatgacttccagtttgaccgggta
ccggtgatcgtggccaccaacgcctttggaatgggcatcgacaagagcaacgttcgcttc
gtcctccacgcgaccagcgccaagaacctggagtcctactaccaggaggccgggcgcgcc
gggcgggacggtctgcccagcgaggcggtgatgctctaccacgccaatgacatccagcag
tatcgctggttcatcgaccagtcgaccgctgacgacgagtaccgggaggtccagtacgag
aagctccaggcggtcaccgcctacgccaacaccccgcgctgcctccagcagcagattgtc
agttactttggccaggaatgcgagccgtgtggccattgcagcaactgcaccgacgaccgc
cagctggaggacatcaccgccatggctcaagcagtcatcgccgtagtcaaggagcttcac
ggccgcttcggcaagtccctggtcgccaaggtggtgaccgggtcccacgaccagcggatc
aaccagctccacgccgaccagctggaacattacggcgccctcaagctctcccagcaggcc
gctggcgccctggtcgactacctgctggccaccggttacctggagttggatggcggccaa
tacccggtggttaagattgccaagcccggttggcgggttcttgatggtgaggccaccgtc
cagcggcggagtgaaccccagccgacccggtcgtcgacgacagtggatgagacgccggag
caggcggccctgtttgagcttcttcgtaagcagcgccgcaaactagccgacgatcagggg
gtcccaccgtttatgatcttctccgaccggacccttcatgacatggcccgcctgcagcct
cagaccccggccgacttcctgacggtcaacggggtcggccaggccaagttgaagaagtat
ggccaaatcatgatggacgagatcggcgcctacctgtccggtaatactgactaa
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integrated database retrieval system
