Limosilactobacillus pontis: LP475_04735
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Entry
LP475_04735 CDS
T07022
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lpon
Limosilactobacillus pontis
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpon03400
]
LP475_04735 (sbcD)
DNA repair and recombination proteins [BR:
lpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LP475_04735 (sbcD)
Archaeal homologous recombinant proteins
LP475_04735 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QFV01066
LinkDB
All DBs
Position
complement(955579..956697)
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AA seq
372 aa
AA seq
DB search
MRFLHTADWHVGKNLNGFDLLSDQQAVFKQIEGIAKERQVDAVVIAGDLYDRSIPSEAAV
RQLNGELVQLNLTDHFPVLAISGNHDSATRLGTGASWFAKEGLYLNTSLDDAFDPVTIGD
TEFFLLPYFGIQAVRNHFGDDAIRDVNTAITRIVAAMQEHFTPGKHHVLVAHFFAAGSQH
TADSETLIEVGGLQAVATTTLAPFDYVALGHLHNRDALHDDRVRYSGSPMKFSVSEANQE
KGVWIIDTDPFTAEWVPLAPVHDIHRLTGAFADLVADDDHPRDDFYDIELTDHERIPDVL
NKLREHYPKIVSLHRTHAARQIDTNHARARRQQSPTDLLADFYQQTMGIDLTDTQLKWAS
DALSAVNDGEEE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttttgcataccgccgattggcacgtcggcaagaacctgaacggtttcgaccta
ctgtcagaccagcaggccgtctttaaacagatcgagggaatcgccaaggagcggcaggtg
gacgcggtggtgatcgccggtgacctctacgaccgcagcatccccagcgaggcggcggtt
cgtcagctcaacggcgaattggtccagctgaacctgaccgaccattttccggtgctggcg
atcagtggtaaccacgactccgctacccggctgggcaccggggcctcctggtttgccaag
gagggcctctatctaaataccagcttggacgacgcctttgatccggtgacgatcggtgac
accgagttctttctgttgccgtacttcggcattcaggcggtccgcaaccacttcggcgac
gacgcgatccgcgacgtcaacacggcgataacccggattgttgcggcgatgcaggagcac
ttcaccccgggcaagcaccatgtcctggtggcccacttctttgcggccggcagtcagcac
acggcggattcggagaccctgatcgaggtcggtgggctgcaggcggtggccacgacaacc
ctggcgccctttgactacgtcgccctgggccacctccacaaccgggacgccctccacgac
gatcgggtgcgttacagcggctcaccgatgaagttctcggtgtcggaggccaaccaggag
aagggggtctggatcatcgacaccgacccgtttacggccgagtgggtgcccttggcgcca
gtccacgatattcaccggttgaccggcgcttttgccgacctggttgctgacgacgatcac
ccgcgggatgacttctatgacattgaactgaccgaccatgaacggatcccggacgtcttg
aacaagctacgcgagcattacccgaagatcgtcagcctccaccggacccacgccgcccgg
cagatcgacaccaatcacgcccgggcccgccgtcagcagtccccgaccgacctcctggct
gatttctaccagcagacgatggggatcgatctgaccgatacgcagcttaagtgggccagc
gacgccctaagcgcggttaatgatggggaggaagagtaa
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