Limosilactobacillus pontis: LP475_06530
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Entry
LP475_06530 CDS
T07022
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpon
Limosilactobacillus pontis
Pathway
lpon03420
Nucleotide excision repair
lpon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LP475_06530 (pcrA)
03430 Mismatch repair
LP475_06530 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpon03400
]
LP475_06530 (pcrA)
Enzymes [BR:
lpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LP475_06530 (pcrA)
DNA repair and recombination proteins [BR:
lpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LP475_06530 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LP475_06530 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QFV01371
LinkDB
All DBs
Position
complement(1296543..1298846)
Genome browser
AA seq
767 aa
AA seq
DB search
MSNSQELLEGMNDKQAEAVVTTEGPLLVMAGAGSGKTRVLTHRVAYLIEEKGVLPWNILA
ITFTNKAAKEMQERVGKLLGESANDVWVSTFHALCVRILRRDIEKIGYNRAFTIADTSEQ
RTLMKRICGELNIDTKKFDPRSILSEISNAKNALLTPAEYSDKANSMFENMVARAYKLYQ
QELEANQALDFDDLIMKTIELFEQDQETLEFYQNKFHYIHVDEYQDTNDAQYRLVNLLAR
GYQNLCVVGDADQSIYGWRGANMNNILNFEHDYPQAKTVMLEQNYRSTQNILDAANEVIV
NNVNRRKKKLWTENGQGEKISYYRAQSEHDEAQFIVAKIKEEREKHGYHYNDFAILYRTN
AQSRVVEETFLKSSVPYTMVGGHKFYDRKEIRDVLAYLTLIVNPQDSMSFTRVVNTPKRG
IGMTSVEHLREFANDNHWSLLQAAENVDIANQITSRTRNKIAAFGDLMKNLTKQSEYLSL
TDLTDQILELSGYNKMLDQDKNLEAQARRENLDEFKSVTQEYDEKHKDDEGDNIQKITNF
LADLALVSDQDDVDEQAPAVTLMTLHAAKGLEFPVVFLVGMEEGIFPLSRAVMEDDELEE
ERRLAYVGITRAKKKLYLTNAFSRLLYGRIQRNQPSRFVEEINPDLLQFENSDEGNDLNE
RKLPFGQGVKRSSWGNRKQAAATATTYSSQQHHYRDAGKKVKPITNTGTGADKVSWKTGD
KVQHKKWGQGTVVKVSGTGNDMELDIAFPQQGVRRLLASFAPITKVD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatagtcaagagcttttagaaggaatgaatgacaagcaggctgaggcggtagtg
accactgaggggccgctgctggtgatggccggggcgggttccgggaagacccgggtcctg
acccaccgggtggcctacctgattgaggagaagggggttcttccctggaacatcctggcg
atcaccttcacgaacaaggccgccaaggagatgcaggagcgggtcggcaagctgctcggc
gagagtgccaacgacgtctgggtttcgaccttccacgctctgtgtgtgcggatcctgcgt
cgcgacattgagaagatcggctataatcgggccttcacgattgccgacaccagtgagcaa
cggacgctgatgaagcggatctgtggcgagttgaacatcgacaccaaaaagttcgacccc
cgcagcattctcagcgagatttccaacgccaagaacgccctgctgacgccggctgagtac
agcgataaggctaacagcatgtttgagaacatggtagcccgggcctacaagctctaccag
caggaactggaggccaaccaggccctagacttcgacgacctgatcatgaaaacgatcgag
ctgtttgaacaggaccaggagaccctggagttctaccaaaacaagttccactacatccac
gtcgacgagtaccaggacaccaacgacgctcagtaccgcctggttaacctgctggcccgt
ggttatcagaacctctgcgttgtcggggatgccgaccagagcatctacggctggcggggt
gccaacatgaataacattctgaactttgagcacgactacccgcaagccaagacggtcatg
ctggagcagaactaccggtccacccagaacatcctggacgcggccaatgaggtgattgtc
aacaacgtcaaccggcgcaagaagaagctctggaccgagaatgggcagggggagaagatc
tcctactaccgggcccagagcgagcacgatgaggcccagttcatcgttgccaagatcaag
gaggaacgggagaagcacggctaccactacaatgattttgccatcctctaccggaccaat
gcccagtcacgggtggtcgaggaaaccttcctgaagagcagtgtgccctacacgatggtc
gggggccacaagttctacgaccgcaaggaaatccgggacgtcctagcctacctgaccctg
attgtcaacccccaggattcgatgagcttcacccgggtcgtcaatactcccaagcggggc
atcggcatgaccagtgttgagcacctgcgagaatttgccaatgacaaccactggtccctc
cttcaggcggccgagaacgtcgacatcgccaaccagattaccagccggacccggaacaag
atcgccgcgtttggcgacctgatgaagaacctaaccaagcagtccgaatacctgagcctg
actgacctgaccgaccagattctggaactgagcggctataacaagatgcttgaccaggac
aagaacctcgaggcgcaggcccgccgggagaacctggacgaattcaagtctgtgacccag
gagtacgacgagaagcacaaggacgatgagggtgataacatccagaagatcaccaacttc
ctggccgacctagccctagtttccgaccaggacgacgtcgacgagcaggcaccggccgtc
acgctgatgaccctgcatgcggccaaggggctggagttcccggttgtcttcctggttggg
atggaagaggggatcttcccactctcccgggccgtcatggaggacgacgagctggaggag
gaacggcgcctggcctacgtcgggatcactcgggccaagaagaaactctacctgaccaat
gccttctcccgtctgctgtatggacggatccagcgcaaccaaccgtcccgcttcgtcgag
gagatcaaccccgacctgctgcagtttgaaaacagtgacgagggtaatgacctaaacgag
cgtaagctgccgtttgggcagggagtcaagcgcagcagctggggcaatcgcaaacaagcc
gcagccacggcgacgacctacagttcccagcaacaccattaccgtgacgccgggaaaaag
gtcaagccaattaccaacactgggactggggccgacaaggtcagctggaagaccggtgac
aaggtccagcacaagaagtggggccaggggaccgtggtcaaggtcagcgggaccggtaac
gacatggagctcgatattgccttcccacagcagggggtcagacggctcctggccagtttt
gccccaattaccaaagttgattga
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