Limosilactobacillus pontis: LP475_06595
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Entry
LP475_06595 CDS
T07022
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lpon
Limosilactobacillus pontis
Pathway
lpon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LP475_06595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpon03021
]
LP475_06595
03400 DNA repair and recombination proteins [BR:
lpon03400
]
LP475_06595
Enzymes [BR:
lpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LP475_06595
Transcription machinery [BR:
lpon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LP475_06595
DNA repair and recombination proteins [BR:
lpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LP475_06595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF961
SpoIVA_ATPase
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFV01384
LinkDB
All DBs
Position
complement(1308682..1309626)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPNIHKIEETDNYGKFVVEPLERGYGTTLGNSLRRVLLASLPGAAITSMQIDGVL
HEFSTVEGVTEDVTQIILNLKKVSLKINSEDQKDLELDVKGPAEVTAADIQGDGEVTILN
PDLHIATVADGAELHIKMTADKGRGYLSANDNKARMEDLAIGVLPIDSIYTPIERVNYTV
ENARVGQRNDYDKLTLDVWTDGSLTPTEAVSLGAKILTEHLAIFVDLTEEAQNSQVMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVKELTDRTVSDMMKVRNLGQKSLEEIK
LKLNDLGVSFRQDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatttgaaaagccaaacattcacaaaattgaagagactgataactacggcaag
tttgttgtagaaccacttgaacgcggttatggaactactcttggtaattcattaagacgt
gtactgctggcttcactcccgggtgcagcaatcaccagtatgcaaattgatggggttttg
catgaatttagcaccgttgaaggtgttactgaagatgtgacccaaattatcttaaatctt
aagaaggtttccttgaagatcaactccgaggatcaaaaagacctcgaacttgatgttaag
gggccggccgaagtaaccgccgccgacatccagggtgatggggaagtcactatcttaaac
cctgacctgcacattgcaactgttgctgatggtgcggaattacacattaagatgacagct
gataaaggtcgcggttacctttctgctaatgataacaaggcccggatggaagatcttgcc
atcggtgtattaccaattgattccatctataccccaatcgaacgtgtaaattacactgtc
gaaaatgcacgtgttggtcaacgcaacgactacgataagttgactttggatgtttggact
gacggttcattaacacctactgaagcggtgagccttggggccaagattttgaccgaacac
ctggcaatttttgtggatctgactgaggaagcacaaaattcccaagtgatggttgaaaag
gaagagacccacaaggaaaagatgctcgaaatgacaattgaggaattggacctctcagta
cggtcatacaactgcctcaagcgtgctggcatcaacaccgtcaaggaattaactgatcgg
accgtttctgacatgatgaaggttcggaacttaggacagaagtcattagaagaaattaag
cttaagttaaatgatctcggtgtttcattccgccaagatgattaa
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