Lonsdalea populi: I6N93_00020
Help
Entry
I6N93_00020 CDS
T06954
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpop03032
]
I6N93_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
lpop03400
]
I6N93_00020 (gyrB)
Enzymes [BR:
lpop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I6N93_00020 (gyrB)
DNA replication proteins [BR:
lpop03032
]
Prokaryotic type
DNA Topoisomerases
I6N93_00020 (gyrB)
DNA repair and recombination proteins [BR:
lpop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6N93_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
QPQ24252
LinkDB
All DBs
Position
3757..6171
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII
VTIHSDNSVSVQDDGRGIPTGLHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIRREGKIHQQTYNHGVPAAPLAVAGEAEKTGTTVRFWPSTDTFTNVL
EFEYDILAKRLRELSFLNSGVSIRLRDEREKDKSDHFHYDGGIKAFVDYLNRNKTPIHPN
VFYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNTYMDK
EGYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVESLMNEKLVD
YLMENPSDAKIVVGKIIDAARAREAARRARDMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRRNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDQYQIALALDGATLHTNAHAPAMAGEPLERLVAEHYAVQKMIGRMER
RYPRPLLNALIYQPSLTEATLSDRQQVQRWMEMLVTLLTGQEKHGSTYSFVIHDTEEGLH
EPQLRVRTHGVDTDYPLNTAFVTGNEYRKINQLGEKLRGLIEEDAFVERGERKLPIVSFE
QALEWLVKESRRGLAVQRYKGLGEMNPEQLWETTMDPEGRRMLRVTVKDAITADELFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaggtattaaaagggctggatgcagttcgt
aagcgcccgggtatgtatatcggcgatacggatgacggaaccggtctgcatcatatggta
ttcgaggtggtggacaacgctatcgacgaagcgctcgctggctactgtaaagacataatc
gtcaccatccatagcgacaactccgtgtcggtgcaggatgatggccgtgggatcccaacc
ggtcttcacgaagaagaaggcgtgtcagccgctgaagtcatcatgacggtgctgcatgcc
ggcggtaaattcgatgataactcctacaaagtttccggcggtttgcacggcgtcggggtt
tccgtggtcaacgccctgtcggaaaaacttgagctgaccattcgccgcgaaggcaaaatt
caccagcagacctacaaccacggtgtgccggccgcgccgctggccgtggcgggcgaggct
gaaaaaaccggtacgaccgtccgcttctggccgagcaccgacaccttcaccaacgtgctg
gaattcgaatacgacattctggccaagcgtctgcgtgagctgtcgttcctgaactccggc
gtttccatccgtctgcgtgacgaacgtgaaaaagataagtccgaccacttccactacgat
ggcggtatcaaagcgtttgtcgattacctgaaccgcaataaaacgccgatccacccgaac
gtgttctatttctccacggtgaaagacgatatcggagtggaagtcgctctgcagtggaac
gacggtttccaggaaaacatctactgctttaccaataacattccgcagcgtgacggcggt
acgcatctggccggcttccgtgccgccatgacccgtactctgaacacctacatggataaa
gaaggctacagcaagaaagccaaaatcagcgcgaccggcgatgacgcgcgcgaaggcctg
attgccgtggtctcggtgaaagtgcccgatccgaagttctcttctcagaccaaagacaag
ctggtgtcgtcggaagtgaagaccgccgttgagtcgctgatgaacgaaaaactggtggat
tacctgatggagaatccatcagacgccaaaatcgtggtcggcaaaatcatcgacgccgcg
cgcgcgcgcgaggccgctcgtcgcgcccgcgatatgacgcgacgcaaaggcgcgctcgac
ctggccggcctgccgggcaaactggcggattgtcaggaacgcgatccggcgctgtctgaa
ctgtacctggtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcagg
aaccaggcgattctcccgctgaaggggaaaatcctgaacgtggagaaggcgcgtttcgac
aaaatgctgtcgtcgcaggaagtcgccacgctgattacggcgttgggttgcggcatcggc
cgtgacgaatacaacccggacaagctgcgctaccacagtatcatcatcatgaccgatgcc
gacgtcgatggttcgcacatccgtacgctgctgttgacgttcttctatcgtcagatgccg
gaaatcatcgaacgcgggcatgtctacatcgctcagccgccgctgtacaaggtgaagaaa
gggaagcaggagcagtacatcaaggatgacgaagcgatggaccagtaccagatcgcgttg
gcattagatggcgcgacgctgcataccaacgcgcatgcgccggcaatggcgggcgagccg
ctggaacgactggtcgccgagcattacgccgtgcagaaaatgattggccgtatggagcgc
cgctacccgcgtccgctgctgaacgcgctgatctaccagccgtccctgaccgaagccacg
ctgtctgaccgccagcaggttcagcgctggatggagatgctggtgacgctgctgaccggg
caggaaaaacacggcagcacctacagcttcgtgatccacgatactgaagaaggtctccac
gagccgcagctgcgtgtgcgcacccacggtgtcgatactgactatccgctgaataccgcg
tttgtgacgggcaacgaataccgcaaaatcaatcagctgggcgaaaaactgcgcggtctg
attgaggaagacgcttttgtcgaacgcggcgagcgcaaactgcctatcgtcagcttcgag
caggcgctggagtggctggtgaaagagtcacgccgtggtctggcggttcagcgctataaa
ggtctgggcgaaatgaacccggaacagctttgggaaaccacgatggatccggaaggccgc
cgcatgttgcgcgttaccgtgaaggatgcgattacggccgatgagttgttcaccacgctg
atgggggatgccgtcgaaccccgtcgcgcctttatcgaagaaaacgcccttaaggcggcg
aacatcgatatctga
DBGET
integrated database retrieval system
