KEGG   Lonsdalea populi: I6N93_00060
Entry
I6N93_00060       CDS       T06954                                 
Symbol
rnz
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
lpop  Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lpop03016]
    I6N93_00060 (rnz)
Enzymes [BR:lpop01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     I6N93_00060 (rnz)
Transfer RNA biogenesis [BR:lpop03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    I6N93_00060 (rnz)
 Prokaryotic type
    I6N93_00060 (rnz)
SSDB
Motif
Pfam: Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B Lactamase_B_4 PDEase_II
Other DBs
NCBI-ProteinID: QPQ24259
LinkDB
Position
complement(12696..13610)
AA seq 304 aa
MELIFLGTSAGIPTKARNVASLALDLQGPRPAFWLFDCGEGTQHQILHTCLSASKIEKIF
ITHLHGDHLFGLPGLLCSRAMAGCQAPLTLYGPAGLKTFIDNALSLSGSYLTYPMEVVEV
ASGPVCEDEHRVVTAYPMSHTLTCVGYRIEERPKPGALDVAQLTKEGIRPGPWFQSLKRG
ESVTLEDGRTLNGADYLGPSTPGRTLAIFGDTRPSEAGRLLAAGVDVMVHEATVEATMAD
RASERGHSTTEQAATLAREAGAGRLIITHISARYGQEDSERLLAECRTIFPATDMATDLA
TFQV
NT seq 915 nt   +upstreamnt  +downstreamnt
atggaactgatatttttaggcaccagcgcgggcatcccgaccaaagcgcgcaatgtggcc
agcctggcgctggatctgcaaggtccgcgccctgccttctggctgttcgactgcggtgag
ggcacgcagcatcagatactgcatacgtgtttaagcgccagcaagatcgagaaaattttc
atcacgcatcttcatggcgaccatctgtttggtctgcccggcctgctgtgttcccgcgcc
atggctggttgtcaggcgccgctgacgctctacggccccgccggactgaaaacgttcatc
gacaatgcgctgagcctgagcggctcttacctcacttatccgatggaggtcgtcgaggtc
gcctccggaccggtttgcgaagacgaacaccgcgtagtgacggcctacccgatgtcgcac
acgttgacctgcgtcgggtatcgcattgaagagcggcctaaacccggcgcgctggacgtg
gcgcaactgacgaaagagggcattcgccccgggccgtggtttcagtcgttgaagcgcggc
gagtccgtcacgctggaggatggacggaccttaaacggcgccgattacctcggtccgtcc
acgccgggccgaacgctcgcgatattcggcgatacccgcccttcggaagccgggcgcttg
ctggccgccggggtggatgtgatggtgcacgaagcgacggtagaggctactatggccgat
cgcgccagcgagcgcggtcattccacgacggaacaggcggcgacgttggcgcgggaagcc
ggggcggggcgtttgattatcacccatatcagcgcgcgatacggtcaggaagacagtgaa
cggctgctggcggagtgccggacgattttcccggccacggacatggctaccgatctggcg
acgtttcaggtgtag

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