Lonsdalea populi: I6N93_00585
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Entry
I6N93_00585 CDS
T06954
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
lpop
Lonsdalea populi
Pathway
lpop00541
Biosynthesis of various nucleotide sugars
lpop01100
Metabolic pathways
lpop01250
Biosynthesis of nucleotide sugars
Module
lpop_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I6N93_00585 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lpop01005
]
I6N93_00585 (rfaD)
Enzymes [BR:
lpop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
I6N93_00585 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
lpop01005
]
Core region
I6N93_00585 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QPQ24356
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Position
complement(127029..127961)
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDQGYRDILVVDNLKDGTKFANLADLDIADYIDKEDFIANI
VAGDDLGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLERSIPFLYASSAATY
GGRSNHFVEERQFEQPLNVYGYSKFLFDQYVREILPHAGSQVCGFRYFNVYGPREGHKGS
MASVAFHLNQQIHQGENPKLFSGSENFKRDFVYVADVAAVNLWFWKQGVSGIFNCGTGRA
ESFQAVADAVLDYHKTGSVEYIPFPEKLQGRYQSYTQADLTKLRAAGYDKPFHTVAEGVA
DYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtgactggcggcgccggctttatcggcagcaatatcgtgaaagcgttgaat
gaccaaggttaccgggacattctggtagttgataacctgaaagacggcaccaagttcgcc
aacctggcggatctggatatcgccgactatatcgataaagaagatttcatcgctaatatc
gtcgccggcgacgatttgggtgatatcgaagcgatcttccacgagggcgcctgctcttcc
accaccgagtgggacgggaagtacatgatggataacaactatcagtactccaaagaggtg
ctgcattactgtctggagcgcagcattcccttcctgtatgcctcttccgccgccacctac
ggcgggcgtagcaaccactttgtggaagagcgtcagttcgaacagccgctgaatgtttac
ggctactccaaatttctgttcgatcagtacgtgcgtgaaattctgccgcacgcgggctcg
caggtctgcggcttccgctatttcaacgtctacggaccgcgtgaaggtcacaaaggcagc
atggccagcgtggcattccaccttaaccagcagatccatcagggcgaaaatccgaagttg
ttctccggcagcgaaaacttcaagcgcgacttcgtctatgtcgccgacgtcgccgccgtt
aacctgtggttctggaaacagggcgtatccggtattttcaactgcgggaccggccgggct
gagtcgttccaggccgtcgccgacgccgtactggattaccacaagaccggcagcgttgag
tacattcccttcccggaaaaactgcagggccgctatcagtcctacacgcaggcggatctg
accaaactgcgcgcggccggttatgacaaaccgttccacaccgtcgctgaaggcgtagcc
gactacatggcctggcttaaccgcgacgcataa
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